Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962461
Identifier: 157962461
GI number: 157962461
Start: 3217724
End: 3219697
Strand: Reverse
Name: 157962461
Synonym: Spea_2640
Alternate gene names: NA
Gene position: 3219697-3217724 (Counterclockwise)
Preceding gene: 157962462
Following gene: 157962459
Centisome position: 62.22
GC content: 45.85
Gene sequence:
>1974_bases ATGGCAAGAATGATAAGTTTTGGAACACCGGTTAACGATGCCGAACGTTGGGCATTCTCCCTGTTAGCTGACGAGCTTCC AGAAGACTATATCCTACTGACAAATGTTGAAATTCCTACAAAATCGGGTCAGGCCATGGAGGTTGATGCGCTCGTGATAG GCGAGTGGGGCGTCTATGTTGTCGATGTTAAAGGCTACATTGGCAGACTTGATGCTGGCATGCATGCTTGGTCCCTCGAT GGCCGCGAAGTGGATAACAGCCTTGCTAAGGCAAACTATGTTGCTCGTGTTTTAGCGGGTAACGTCAAGCATAAAATTCC TGTTGGGGTTTATGCACCTTGGTGCCAAGGTATGGTGTTTGTGACTGGCCGTAAAGGCGAGGAGATTGAACTCGAAAAGC AGCAAGGCTCGCTGAGTATCTACACACCAAAGCAAATTGTCGAGGCGTTAACTACCGAGTGGGGACTCACAGCGCCTAGA AAGCACCAAGTGACCGACACTCAAAAAGAGTTGGTATTAGAAACCATTGGTCAGGTTGCCATTGTCGAGAAACGTAACAA TAAGATCCAAGACTTCACCAAACTCAAGTGCCTGTTTATTCAAAGTGGCCTAGAGGTCTGGCAGGCTGAATACAACCCTG GTGAGTGGACCGCACCTTGGCTATTAAAAGTGCTTATCCCCACTCAATTTGCCGATAGCGACCAATCCGAGGCTCATGAG GCACAGCTGAGAAGTGAATTCTTACGTCTGCAGTCTTTGTCAGGCTGTTGCGGTGTTCCCTATTGTGCGCCCCTTATCCA AGACGGTGAGCAGCTAGTTCTCCCGATTCGTATGCCTCGAGGAGTACCTTTGAATGTACTCGATTCGAAGCAGATGACCA CTTATCAGTTACTTGAAGTGTTGCGCCGAAGCGTCACTGGATTGCAGCAGATCCATCGCCGTGGTTTTACGGTTGGTGGC TGGACGAGCAACTGTATCTTTGTTTCCGATATGGGCGATGTCGAGTTTATTGATATCAAAGATAATGTCAGTAGCAGTGA TGATATTAAGGCTTATGCACAAGGTTTCCTCGCCATTGCCGAGCAAACTCAACAGCCGCGTATTTATCAGTGGTATCGTG AGGCTGTTGCGGGCAGCACTACAGATTTAGACGCATTGCGCAGTGATTTATCTGCATTAATCGATCACGGTGTATGTGAT ACCGTCCCTGAAAAAATTGAAATCTGCGCCGGCGCAATCATTGACCATCACTTTAAGCTTGAGCAATTTATTGCAGCCAA AGAAACCAGCCAGTTCTGGCGCGCGACTCACCTACAGGGCCAATATCAATGTGGCGTATCAATATACAGTAAAGTTGAAG CTAACTGGCCGATGCTGAGTAGTATTTATCGGACGCTAGCAAAAGTTTATCACCCTCATATTGAAAAAGTATTAGCATTT GGTCAGCTACCACAAAGTGATAACCTGTTTATTGCTCGTGCTTGGGAATATGGTGAATCAATTGACGAAGTCAAAGAGAT CAAACTTGGCCAACCGTTGATGTGGTTTACTCAGTTACTCACTGGCCTACAATACATGCATCAAATGGATATTTATCATG GTGCTATTTGCCCTAAAAATATCATCTGTAATCCCAATAAAGCCATTTTAGTCAACTTTGGCATTGGGCTAGATATTGCC GCCAGTCATTACGCTTGCCAATATGCCGATCCAACCCTTTGGGAGGTTGAGGGAGAAGCCGAGCGTGATCTATATGGTTT AGTTGCCAGCTTTATCGATGCTATGGCGCCAGAGAGCTTAAAAGGCAATTTGTGCCAAGCGGGCATTATCAACGCTCTAG AAGCTTTTGATAGAGAGTGGTTTGGTGAAAAGCTTTATGATGTGTGTCATAAGGTGCTTAACTTTGACTTAAGCGTTCAT GCAGGTATGAACTACTTAGAGATGTTCGATTTAGCCGAAAACGACGTTATCTAA
Upstream 100 bases:
>100_bases TTTTCAAAATAAGCCACTTATATTAGTGGCTTTTTTGTGCCCAAAAGTTAAGAATACGGATAGTCCTTATATGTATCAAT TGCCACCGAAGGAGAAAAGA
Downstream 100 bases:
>100_bases TGTGGCTTAAGCAGAGAGTTAGTCATCACTAACGCTATTGCTGCCTATATGGGCTAAATAGTTCGAGTAGCCAGTCGATA AAAGATTGCACTTTTAACGG
Product: serine/threonine protein kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 657; Mature: 656
Protein sequence:
>657_residues MARMISFGTPVNDAERWAFSLLADELPEDYILLTNVEIPTKSGQAMEVDALVIGEWGVYVVDVKGYIGRLDAGMHAWSLD GREVDNSLAKANYVARVLAGNVKHKIPVGVYAPWCQGMVFVTGRKGEEIELEKQQGSLSIYTPKQIVEALTTEWGLTAPR KHQVTDTQKELVLETIGQVAIVEKRNNKIQDFTKLKCLFIQSGLEVWQAEYNPGEWTAPWLLKVLIPTQFADSDQSEAHE AQLRSEFLRLQSLSGCCGVPYCAPLIQDGEQLVLPIRMPRGVPLNVLDSKQMTTYQLLEVLRRSVTGLQQIHRRGFTVGG WTSNCIFVSDMGDVEFIDIKDNVSSSDDIKAYAQGFLAIAEQTQQPRIYQWYREAVAGSTTDLDALRSDLSALIDHGVCD TVPEKIEICAGAIIDHHFKLEQFIAAKETSQFWRATHLQGQYQCGVSIYSKVEANWPMLSSIYRTLAKVYHPHIEKVLAF GQLPQSDNLFIARAWEYGESIDEVKEIKLGQPLMWFTQLLTGLQYMHQMDIYHGAICPKNIICNPNKAILVNFGIGLDIA ASHYACQYADPTLWEVEGEAERDLYGLVASFIDAMAPESLKGNLCQAGIINALEAFDREWFGEKLYDVCHKVLNFDLSVH AGMNYLEMFDLAENDVI
Sequences:
>Translated_657_residues MARMISFGTPVNDAERWAFSLLADELPEDYILLTNVEIPTKSGQAMEVDALVIGEWGVYVVDVKGYIGRLDAGMHAWSLD GREVDNSLAKANYVARVLAGNVKHKIPVGVYAPWCQGMVFVTGRKGEEIELEKQQGSLSIYTPKQIVEALTTEWGLTAPR KHQVTDTQKELVLETIGQVAIVEKRNNKIQDFTKLKCLFIQSGLEVWQAEYNPGEWTAPWLLKVLIPTQFADSDQSEAHE AQLRSEFLRLQSLSGCCGVPYCAPLIQDGEQLVLPIRMPRGVPLNVLDSKQMTTYQLLEVLRRSVTGLQQIHRRGFTVGG WTSNCIFVSDMGDVEFIDIKDNVSSSDDIKAYAQGFLAIAEQTQQPRIYQWYREAVAGSTTDLDALRSDLSALIDHGVCD TVPEKIEICAGAIIDHHFKLEQFIAAKETSQFWRATHLQGQYQCGVSIYSKVEANWPMLSSIYRTLAKVYHPHIEKVLAF GQLPQSDNLFIARAWEYGESIDEVKEIKLGQPLMWFTQLLTGLQYMHQMDIYHGAICPKNIICNPNKAILVNFGIGLDIA ASHYACQYADPTLWEVEGEAERDLYGLVASFIDAMAPESLKGNLCQAGIINALEAFDREWFGEKLYDVCHKVLNFDLSVH AGMNYLEMFDLAENDVI >Mature_656_residues ARMISFGTPVNDAERWAFSLLADELPEDYILLTNVEIPTKSGQAMEVDALVIGEWGVYVVDVKGYIGRLDAGMHAWSLDG REVDNSLAKANYVARVLAGNVKHKIPVGVYAPWCQGMVFVTGRKGEEIELEKQQGSLSIYTPKQIVEALTTEWGLTAPRK HQVTDTQKELVLETIGQVAIVEKRNNKIQDFTKLKCLFIQSGLEVWQAEYNPGEWTAPWLLKVLIPTQFADSDQSEAHEA QLRSEFLRLQSLSGCCGVPYCAPLIQDGEQLVLPIRMPRGVPLNVLDSKQMTTYQLLEVLRRSVTGLQQIHRRGFTVGGW TSNCIFVSDMGDVEFIDIKDNVSSSDDIKAYAQGFLAIAEQTQQPRIYQWYREAVAGSTTDLDALRSDLSALIDHGVCDT VPEKIEICAGAIIDHHFKLEQFIAAKETSQFWRATHLQGQYQCGVSIYSKVEANWPMLSSIYRTLAKVYHPHIEKVLAFG QLPQSDNLFIARAWEYGESIDEVKEIKLGQPLMWFTQLLTGLQYMHQMDIYHGAICPKNIICNPNKAILVNFGIGLDIAA SHYACQYADPTLWEVEGEAERDLYGLVASFIDAMAPESLKGNLCQAGIINALEAFDREWFGEKLYDVCHKVLNFDLSVHA GMNYLEMFDLAENDVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73750; Mature: 73619
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS50965 NERD ; PS50011 PROTEIN_KINASE_DOM ; PS00251 TNF_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARMISFGTPVNDAERWAFSLLADELPEDYILLTNVEIPTKSGQAMEVDALVIGEWGVYV CCCEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEEEEECCCEEE VDVKGYIGRLDAGMHAWSLDGREVDNSLAKANYVARVLAGNVKHKIPVGVYAPWCQGMVF EECCCHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHCCEEE VTGRKGEEIELEKQQGSLSIYTPKQIVEALTTEWGLTAPRKHQVTDTQKELVLETIGQVA EECCCCCEEEEECCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCEE IVEKRNNKIQDFTKLKCLFIQSGLEVWQAEYNPGEWTAPWLLKVLIPTQFADSDQSEAHE EEECCCCCHHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHH AQLRSEFLRLQSLSGCCGVPYCAPLIQDGEQLVLPIRMPRGVPLNVLDSKQMTTYQLLEV HHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHH LRRSVTGLQQIHRRGFTVGGWTSNCIFVSDMGDVEFIDIKDNVSSSDDIKAYAQGFLAIA HHHHHHHHHHHHHCCCEECCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHH EQTQQPRIYQWYREAVAGSTTDLDALRSDLSALIDHGVCDTVPEKIEICAGAIIDHHFKL HHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH EQFIAAKETSQFWRATHLQGQYQCGVSIYSKVEANWPMLSSIYRTLAKVYHPHIEKVLAF HHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH GQLPQSDNLFIARAWEYGESIDEVKEIKLGQPLMWFTQLLTGLQYMHQMDIYHGAICPKN CCCCCCCCEEEEECCHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC IICNPNKAILVNFGIGLDIAASHYACQYADPTLWEVEGEAERDLYGLVASFIDAMAPESL EEECCCCEEEEEECCCCEECCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCC KGNLCQAGIINALEAFDREWFGEKLYDVCHKVLNFDLSVHAGMNYLEMFDLAENDVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHCCCCC >Mature Secondary Structure ARMISFGTPVNDAERWAFSLLADELPEDYILLTNVEIPTKSGQAMEVDALVIGEWGVYV CCEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEEEEECCCEEE VDVKGYIGRLDAGMHAWSLDGREVDNSLAKANYVARVLAGNVKHKIPVGVYAPWCQGMVF EECCCHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECHHHCCEEE VTGRKGEEIELEKQQGSLSIYTPKQIVEALTTEWGLTAPRKHQVTDTQKELVLETIGQVA EECCCCCEEEEECCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCEE IVEKRNNKIQDFTKLKCLFIQSGLEVWQAEYNPGEWTAPWLLKVLIPTQFADSDQSEAHE EEECCCCCHHHHHHHHHHHHHHCHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHH AQLRSEFLRLQSLSGCCGVPYCAPLIQDGEQLVLPIRMPRGVPLNVLDSKQMTTYQLLEV HHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHH LRRSVTGLQQIHRRGFTVGGWTSNCIFVSDMGDVEFIDIKDNVSSSDDIKAYAQGFLAIA HHHHHHHHHHHHHCCCEECCCCCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHH EQTQQPRIYQWYREAVAGSTTDLDALRSDLSALIDHGVCDTVPEKIEICAGAIIDHHFKL HHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH EQFIAAKETSQFWRATHLQGQYQCGVSIYSKVEANWPMLSSIYRTLAKVYHPHIEKVLAF HHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH GQLPQSDNLFIARAWEYGESIDEVKEIKLGQPLMWFTQLLTGLQYMHQMDIYHGAICPKN CCCCCCCCEEEEECCHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC IICNPNKAILVNFGIGLDIAASHYACQYADPTLWEVEGEAERDLYGLVASFIDAMAPESL EEECCCCEEEEEECCCCEECCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCC KGNLCQAGIINALEAFDREWFGEKLYDVCHKVLNFDLSVHAGMNYLEMFDLAENDVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA