Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157962451

Identifier: 157962451

GI number: 157962451

Start: 3199976

End: 3200605

Strand: Direct

Name: 157962451

Synonym: Spea_2630

Alternate gene names: NA

Gene position: 3199976-3200605 (Clockwise)

Preceding gene: 157962448

Following gene: 157962456

Centisome position: 61.84

GC content: 38.57

Gene sequence:

>630_bases
ATGACCACATACCCGCAAAGAGTAGCTGCTAATATTTTGCCTCTATCCGTAGCAGGAACATTACCTGATGCTTTCGGGGA
GTGGTATTTCACCGATAATATTGAAGACCATGAAATTGCTAACGAAGACTGTGAGCTATGTGATCAAGAGCAGCTCAGAT
ATCATTTCGAGATCAAAAACAGACGCACTAATCATCATCTTTGGGTGGGCTCTAGCTGCATACTAAAATTTCAAGTTCAA
GTCTTTGAAAATGGCATTTTGCTTGATGCAAAAGGTTCTAAGAAGAAGCTTAACGAGTTAAAGCAGAAAATGCGGCTAGA
TTCATGTGTAAAATCTTTAAGAAATCTAGCTGAGACCGAAGATAACGTCATATTAAATAATGCATTAGACTTCTACCTAA
AGAATAAATATTTGACACCAAAGTTTGCTTTCGTTGTTTTCTGGCGCTTATCAAGTAACAACATTGACCATAGCCCGTCA
TTCTTCAAAGTAAGTTTAAAAAATGACAAGTACAAACAAGACTTAACTCAAATGGATGAGAGTCGTGTCCACCTTATCTG
GCCAGCTCTCACTAGTAGCCAGAGAAAACTAGCGATTCAATATGGCCACAGTGAGCCTGACAATACGTAA

Upstream 100 bases:

>100_bases
AACAGTCGGTTGGCTTGGTATGGTTGCTGCTAAGTTGAATTTTAGCCGGAAGATTATCGAGCAGCTAGATAATAAGACGT
TACGTATCAAGGAGTGATGA

Downstream 100 bases:

>100_bases
CAAGCGCCTCAAAAACGACACCGTTTGCAGTCATGGTTTTAGCAAACATCGCAAAACAACATGCCAGCACGGTACGTGTT
AGGCGGGCGTTATGTGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MTTYPQRVAANILPLSVAGTLPDAFGEWYFTDNIEDHEIANEDCELCDQEQLRYHFEIKNRRTNHHLWVGSSCILKFQVQ
VFENGILLDAKGSKKKLNELKQKMRLDSCVKSLRNLAETEDNVILNNALDFYLKNKYLTPKFAFVVFWRLSSNNIDHSPS
FFKVSLKNDKYKQDLTQMDESRVHLIWPALTSSQRKLAIQYGHSEPDNT

Sequences:

>Translated_209_residues
MTTYPQRVAANILPLSVAGTLPDAFGEWYFTDNIEDHEIANEDCELCDQEQLRYHFEIKNRRTNHHLWVGSSCILKFQVQ
VFENGILLDAKGSKKKLNELKQKMRLDSCVKSLRNLAETEDNVILNNALDFYLKNKYLTPKFAFVVFWRLSSNNIDHSPS
FFKVSLKNDKYKQDLTQMDESRVHLIWPALTSSQRKLAIQYGHSEPDNT
>Mature_208_residues
TTYPQRVAANILPLSVAGTLPDAFGEWYFTDNIEDHEIANEDCELCDQEQLRYHFEIKNRRTNHHLWVGSSCILKFQVQV
FENGILLDAKGSKKKLNELKQKMRLDSCVKSLRNLAETEDNVILNNALDFYLKNKYLTPKFAFVVFWRLSSNNIDHSPSF
FKVSLKNDKYKQDLTQMDESRVHLIWPALTSSQRKLAIQYGHSEPDNT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24331; Mature: 24200

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTYPQRVAANILPLSVAGTLPDAFGEWYFTDNIEDHEIANEDCELCDQEQLRYHFEIKN
CCCCHHHHHHHHCEEEECCCCCHHHCCEEECCCCCCCCCCCCHHHHCCHHHHEEEEEECC
RRTNHHLWVGSSCILKFQVQVFENGILLDAKGSKKKLNELKQKMRLDSCVKSLRNLAETE
CCCCCEEEECCCEEEEEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
DNVILNNALDFYLKNKYLTPKFAFVVFWRLSSNNIDHSPSFFKVSLKNDKYKQDLTQMDE
CCEEEECHHEEEECCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHCC
SRVHLIWPALTSSQRKLAIQYGHSEPDNT
CCEEEEEECCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure 
TTYPQRVAANILPLSVAGTLPDAFGEWYFTDNIEDHEIANEDCELCDQEQLRYHFEIKN
CCCHHHHHHHHCEEEECCCCCHHHCCEEECCCCCCCCCCCCHHHHCCHHHHEEEEEECC
RRTNHHLWVGSSCILKFQVQVFENGILLDAKGSKKKLNELKQKMRLDSCVKSLRNLAETE
CCCCCEEEECCCEEEEEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
DNVILNNALDFYLKNKYLTPKFAFVVFWRLSSNNIDHSPSFFKVSLKNDKYKQDLTQMDE
CCEEEECHHEEEECCCCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHCC
SRVHLIWPALTSSQRKLAIQYGHSEPDNT
CCEEEEEECCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA