Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is yeaC [H]
Identifier: 157962237
GI number: 157962237
Start: 2946946
End: 2947857
Strand: Direct
Name: yeaC [H]
Synonym: Spea_2416
Alternate gene names: 157962237
Gene position: 2946946-2947857 (Clockwise)
Preceding gene: 157962236
Following gene: 157962238
Centisome position: 56.95
GC content: 47.37
Gene sequence:
>912_bases ATGCACAATGACAATATTAACGCTGTTTTGCAGCAACTCGACACAGTACTACTCGGTAAGCCTCACCAAATTAAGCTAGC GCTGACCTGTATTTTAGCTAAGGGGCACCTGCTTATTGAAGATCTTCCCGGTATGGGGAAGACCAGTCTCTCTCAAGGTT TGGCGCAAACCTTAGGCCTGAGTTACCAAAGGATCCAGTTTACTAGCGACATGCTGCCAGCCGATATTCTTGGCGTTTCC ATTTTCGATAAAGAACAGTCTCAATTTACATTTCATCCGGGTCCGATTTTTAGGCAGATGATCCTCGCCGATGAGATCAA TCGTGCCAGCCCTAAGACCCAGAGTGCGTTACTAGAAGCGATGGCAGAGCAACAGATCACCGTAGATGGTAAGACCCTCC CATTACCGCAACCCTTTTTTGTCATCGCGACTCAAAATCCCTGTGAACAATCGGGCACATTTCCACTTCCAGAATCACAG CTTGACCGATTTATGATGCGGATAGCCATCGGCTACCCAGCGCCCAAGGCTGAACTGGCAATGTTAAAGGGGCAAGATAG CACTTCAAGTGAACGAGTCTTACCTCAATGCCTAACCCAGTTAACCTTGCAAGAGTTACAGACACTGACTCAAGAAGTCA GCGCGTCAGACTCTCTGCTGCAATATATTCTCGCCTTAGTTAACGCCTCTAGAGCTGAGTCTCAAGGCTCAGGACTCTCT CCAAGAGCCAGCAAGGCAATACTGCAAGCCGCGAAAGCTTGGGCGATGATCCATGGGAGAAAATATCTAGTCCCAGAAGA CGTTCAAGCGATATTTCCCCATGTAGCAGAGCACAGAATTAGACAATTTTCTCATCAGCAAGGTGAGGCGCTATCGGCTA AAATTCTCAATAAAGTCAACCCAATACTTTAG
Upstream 100 bases:
>100_bases TAATAGCACTGGAAAGTGGGCTGAATTTCCACCATAGTAGGAAACAGAACGGATTTGTCTGCCCTTAAAAAATATCAACA TTGTTTGCACAAGGAACTCT
Downstream 100 bases:
>100_bases TTATCCAGGCTAAACGTTTCTAGGCTGGGCCCCTTAAGCTGATTTAAACCAGCACTAGAGTGACAGGAGATTATGCAAAA CCAGACTAAGATAAAAACCA
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MHNDNINAVLQQLDTVLLGKPHQIKLALTCILAKGHLLIEDLPGMGKTSLSQGLAQTLGLSYQRIQFTSDMLPADILGVS IFDKEQSQFTFHPGPIFRQMILADEINRASPKTQSALLEAMAEQQITVDGKTLPLPQPFFVIATQNPCEQSGTFPLPESQ LDRFMMRIAIGYPAPKAELAMLKGQDSTSSERVLPQCLTQLTLQELQTLTQEVSASDSLLQYILALVNASRAESQGSGLS PRASKAILQAAKAWAMIHGRKYLVPEDVQAIFPHVAEHRIRQFSHQQGEALSAKILNKVNPIL
Sequences:
>Translated_303_residues MHNDNINAVLQQLDTVLLGKPHQIKLALTCILAKGHLLIEDLPGMGKTSLSQGLAQTLGLSYQRIQFTSDMLPADILGVS IFDKEQSQFTFHPGPIFRQMILADEINRASPKTQSALLEAMAEQQITVDGKTLPLPQPFFVIATQNPCEQSGTFPLPESQ LDRFMMRIAIGYPAPKAELAMLKGQDSTSSERVLPQCLTQLTLQELQTLTQEVSASDSLLQYILALVNASRAESQGSGLS PRASKAILQAAKAWAMIHGRKYLVPEDVQAIFPHVAEHRIRQFSHQQGEALSAKILNKVNPIL >Mature_303_residues MHNDNINAVLQQLDTVLLGKPHQIKLALTCILAKGHLLIEDLPGMGKTSLSQGLAQTLGLSYQRIQFTSDMLPADILGVS IFDKEQSQFTFHPGPIFRQMILADEINRASPKTQSALLEAMAEQQITVDGKTLPLPQPFFVIATQNPCEQSGTFPLPESQ LDRFMMRIAIGYPAPKAELAMLKGQDSTSSERVLPQCLTQLTLQELQTLTQEVSASDSLLQYILALVNASRAESQGSGLS PRASKAILQAAKAWAMIHGRKYLVPEDVQAIFPHVAEHRIRQFSHQQGEALSAKILNKVNPIL
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the moxR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011703 - InterPro: IPR016366 [H]
Pfam domain/function: PF07726 AAA_3 [H]
EC number: NA
Molecular weight: Translated: 33296; Mature: 33296
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNDNINAVLQQLDTVLLGKPHQIKLALTCILAKGHLLIEDLPGMGKTSLSQGLAQTLGL CCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCC SYQRIQFTSDMLPADILGVSIFDKEQSQFTFHPGPIFRQMILADEINRASPKTQSALLEA CHHHHHHHHHCCCHHHHCCCEECCCCCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHH MAEQQITVDGKTLPLPQPFFVIATQNPCEQSGTFPLPESQLDRFMMRIAIGYPAPKAELA HHHCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH MLKGQDSTSSERVLPQCLTQLTLQELQTLTQEVSASDSLLQYILALVNASRAESQGSGLS EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC PRASKAILQAAKAWAMIHGRKYLVPEDVQAIFPHVAEHRIRQFSHQQGEALSAKILNKVN HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC PIL CCC >Mature Secondary Structure MHNDNINAVLQQLDTVLLGKPHQIKLALTCILAKGHLLIEDLPGMGKTSLSQGLAQTLGL CCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCC SYQRIQFTSDMLPADILGVSIFDKEQSQFTFHPGPIFRQMILADEINRASPKTQSALLEA CHHHHHHHHHCCCHHHHCCCEECCCCCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHH MAEQQITVDGKTLPLPQPFFVIATQNPCEQSGTFPLPESQLDRFMMRIAIGYPAPKAELA HHHCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHH MLKGQDSTSSERVLPQCLTQLTLQELQTLTQEVSASDSLLQYILALVNASRAESQGSGLS EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC PRASKAILQAAKAWAMIHGRKYLVPEDVQAIFPHVAEHRIRQFSHQQGEALSAKILNKVN HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC PIL CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969499; 9384377 [H]