Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157962238
Identifier: 157962238
GI number: 157962238
Start: 2947930
End: 2948946
Strand: Direct
Name: 157962238
Synonym: Spea_2417
Alternate gene names: NA
Gene position: 2947930-2948946 (Clockwise)
Preceding gene: 157962237
Following gene: 157962239
Centisome position: 56.97
GC content: 46.02
Gene sequence:
>1017_bases ATGCAAAACCAGACTAAGATAAAAACCAAGCTCAACCGACAGTGGCAAACTTGGATCTCACGCCGATTACCCGCAAGAGA GCAGATAACCCTCAGTCACAAGAGTATTTTCATTTTACCAACAGGCTTTGGTCTGGCTTGGCTCGTCCTGCTGGTTGTAT TGTTTTTGTTTGGCACCAACTACCAAAATAATCTGGTCATGGGGTTAAGCTTCTTGCTGTTAAGCATTTTCAACACCTGC ATCATCTATAGCTATAAAAATCTCGCCGGATTAAGCCTCTCTAGCAGTAAAGCAAATAATACTGTTGCAGGCCAAGCTAT CTATTTCCCGATCAATCTATCTTGTCCGAATCGAGCCTACGAAGTTCAGCTTAACTTTCAAAATCAACCTCTAGAAGTCG TCAAAAAAGTAAGCGAACACCAGACACAAGCATTGGTCACCTATAACAAAGCCCATCGCGGCATCAATCATCCAGGCCGA GTAAAAATCGAAACACGCTATCCTCTAGGGCTTTTTCGGGCTTGGTCACATATCGACCTCGCGCAGGCCCAGCTAGTCTA TGCCGAGCCAGTTATCGACCCTAACCCAGTTTATTTAAATTCAGACCATACAAGCGAGCAGCAAGATACGGGTAAATATG TGGCAGGAATTGATGAGTATAAAGGTTTACGAGAATACGTTCTTGGCGAGTCATTAAAGCAGGTTGCCTGGAAACAATGG GCGCAGGGACGAGGCATGTTGACCAAAGAGTTCGAAGAGCCCCAAGGGGCACCTATGTGGTTATCATTAGATCCTAAGTC CAATGATATCGAACTGGCCTTGAGCCATCTTGCCTGGCATACCGAGCAACTAAGTGCTAAGAGACAAGTTTTTGGTTTAA AGATTGGTGGGAGTACTATCCACCCCTCTCATGGCGAGCACCACAGAAACAAGGTCCAGACGCAACTCGCCTTATATCCG AGTTCAAGCCCACACCCAAATCCAAGCCCAAAGTATGCCCCTAAGGCTGGCCTATGA
Upstream 100 bases:
>100_bases TCTCAATAAAGTCAACCCAATACTTTAGTTATCCAGGCTAAACGTTTCTAGGCTGGGCCCCTTAAGCTGATTTAAACCAG CACTAGAGTGACAGGAGATT
Downstream 100 bases:
>100_bases CACAGAAAGAGCGCCAGAGTATTTCCCGCCATACCTTGATGTGGCTACTACTTGCCAATATTGCCATTTTATCTCCGCTC TATGAGCAGGTCACGCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MQNQTKIKTKLNRQWQTWISRRLPAREQITLSHKSIFILPTGFGLAWLVLLVVLFLFGTNYQNNLVMGLSFLLLSIFNTC IIYSYKNLAGLSLSSSKANNTVAGQAIYFPINLSCPNRAYEVQLNFQNQPLEVVKKVSEHQTQALVTYNKAHRGINHPGR VKIETRYPLGLFRAWSHIDLAQAQLVYAEPVIDPNPVYLNSDHTSEQQDTGKYVAGIDEYKGLREYVLGESLKQVAWKQW AQGRGMLTKEFEEPQGAPMWLSLDPKSNDIELALSHLAWHTEQLSAKRQVFGLKIGGSTIHPSHGEHHRNKVQTQLALYP SSSPHPNPSPKYAPKAGL
Sequences:
>Translated_338_residues MQNQTKIKTKLNRQWQTWISRRLPAREQITLSHKSIFILPTGFGLAWLVLLVVLFLFGTNYQNNLVMGLSFLLLSIFNTC IIYSYKNLAGLSLSSSKANNTVAGQAIYFPINLSCPNRAYEVQLNFQNQPLEVVKKVSEHQTQALVTYNKAHRGINHPGR VKIETRYPLGLFRAWSHIDLAQAQLVYAEPVIDPNPVYLNSDHTSEQQDTGKYVAGIDEYKGLREYVLGESLKQVAWKQW AQGRGMLTKEFEEPQGAPMWLSLDPKSNDIELALSHLAWHTEQLSAKRQVFGLKIGGSTIHPSHGEHHRNKVQTQLALYP SSSPHPNPSPKYAPKAGL >Mature_338_residues MQNQTKIKTKLNRQWQTWISRRLPAREQITLSHKSIFILPTGFGLAWLVLLVVLFLFGTNYQNNLVMGLSFLLLSIFNTC IIYSYKNLAGLSLSSSKANNTVAGQAIYFPINLSCPNRAYEVQLNFQNQPLEVVKKVSEHQTQALVTYNKAHRGINHPGR VKIETRYPLGLFRAWSHIDLAQAQLVYAEPVIDPNPVYLNSDHTSEQQDTGKYVAGIDEYKGLREYVLGESLKQVAWKQW AQGRGMLTKEFEEPQGAPMWLSLDPKSNDIELALSHLAWHTEQLSAKRQVFGLKIGGSTIHPSHGEHHRNKVQTQLALYP SSSPHPNPSPKYAPKAGL
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38194; Mature: 38194
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNQTKIKTKLNRQWQTWISRRLPAREQITLSHKSIFILPTGFGLAWLVLLVVLFLFGTN CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHHCCC YQNNLVMGLSFLLLSIFNTCIIYSYKNLAGLSLSSSKANNTVAGQAIYFPINLSCPNRAY CCCCHHHHHHHHHHHHHHHHHEEECCCCCCCEECCCCCCCCEECEEEEEEEEECCCCCEE EVQLNFQNQPLEVVKKVSEHQTQALVTYNKAHRGINHPGRVKIETRYPLGLFRAWSHIDL EEEEECCCCCHHHHHHHHHHHHHHEEEEHHHHCCCCCCCEEEEEEECCHHHHHHHCCCCH AQAQLVYAEPVIDPNPVYLNSDHTSEQQDTGKYVAGIDEYKGLREYVLGESLKQVAWKQW HHHEEEEECCCCCCCCEEECCCCCCCHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH AQGRGMLTKEFEEPQGAPMWLSLDPKSNDIELALSHLAWHTEQLSAKRQVFGLKIGGSTI HCCCCCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCEE HPSHGEHHRNKVQTQLALYPSSSPHPNPSPKYAPKAGL CCCCCHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQNQTKIKTKLNRQWQTWISRRLPAREQITLSHKSIFILPTGFGLAWLVLLVVLFLFGTN CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHHCCC YQNNLVMGLSFLLLSIFNTCIIYSYKNLAGLSLSSSKANNTVAGQAIYFPINLSCPNRAY CCCCHHHHHHHHHHHHHHHHHEEECCCCCCCEECCCCCCCCEECEEEEEEEEECCCCCEE EVQLNFQNQPLEVVKKVSEHQTQALVTYNKAHRGINHPGRVKIETRYPLGLFRAWSHIDL EEEEECCCCCHHHHHHHHHHHHHHEEEEHHHHCCCCCCCEEEEEEECCHHHHHHHCCCCH AQAQLVYAEPVIDPNPVYLNSDHTSEQQDTGKYVAGIDEYKGLREYVLGESLKQVAWKQW HHHEEEEECCCCCCCCEEECCCCCCCHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH AQGRGMLTKEFEEPQGAPMWLSLDPKSNDIELALSHLAWHTEQLSAKRQVFGLKIGGSTI HCCCCCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCEE HPSHGEHHRNKVQTQLALYPSSSPHPNPSPKYAPKAGL CCCCCHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA