Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962238

Identifier: 157962238

GI number: 157962238

Start: 2947930

End: 2948946

Strand: Direct

Name: 157962238

Synonym: Spea_2417

Alternate gene names: NA

Gene position: 2947930-2948946 (Clockwise)

Preceding gene: 157962237

Following gene: 157962239

Centisome position: 56.97

GC content: 46.02

Gene sequence:

>1017_bases
ATGCAAAACCAGACTAAGATAAAAACCAAGCTCAACCGACAGTGGCAAACTTGGATCTCACGCCGATTACCCGCAAGAGA
GCAGATAACCCTCAGTCACAAGAGTATTTTCATTTTACCAACAGGCTTTGGTCTGGCTTGGCTCGTCCTGCTGGTTGTAT
TGTTTTTGTTTGGCACCAACTACCAAAATAATCTGGTCATGGGGTTAAGCTTCTTGCTGTTAAGCATTTTCAACACCTGC
ATCATCTATAGCTATAAAAATCTCGCCGGATTAAGCCTCTCTAGCAGTAAAGCAAATAATACTGTTGCAGGCCAAGCTAT
CTATTTCCCGATCAATCTATCTTGTCCGAATCGAGCCTACGAAGTTCAGCTTAACTTTCAAAATCAACCTCTAGAAGTCG
TCAAAAAAGTAAGCGAACACCAGACACAAGCATTGGTCACCTATAACAAAGCCCATCGCGGCATCAATCATCCAGGCCGA
GTAAAAATCGAAACACGCTATCCTCTAGGGCTTTTTCGGGCTTGGTCACATATCGACCTCGCGCAGGCCCAGCTAGTCTA
TGCCGAGCCAGTTATCGACCCTAACCCAGTTTATTTAAATTCAGACCATACAAGCGAGCAGCAAGATACGGGTAAATATG
TGGCAGGAATTGATGAGTATAAAGGTTTACGAGAATACGTTCTTGGCGAGTCATTAAAGCAGGTTGCCTGGAAACAATGG
GCGCAGGGACGAGGCATGTTGACCAAAGAGTTCGAAGAGCCCCAAGGGGCACCTATGTGGTTATCATTAGATCCTAAGTC
CAATGATATCGAACTGGCCTTGAGCCATCTTGCCTGGCATACCGAGCAACTAAGTGCTAAGAGACAAGTTTTTGGTTTAA
AGATTGGTGGGAGTACTATCCACCCCTCTCATGGCGAGCACCACAGAAACAAGGTCCAGACGCAACTCGCCTTATATCCG
AGTTCAAGCCCACACCCAAATCCAAGCCCAAAGTATGCCCCTAAGGCTGGCCTATGA

Upstream 100 bases:

>100_bases
TCTCAATAAAGTCAACCCAATACTTTAGTTATCCAGGCTAAACGTTTCTAGGCTGGGCCCCTTAAGCTGATTTAAACCAG
CACTAGAGTGACAGGAGATT

Downstream 100 bases:

>100_bases
CACAGAAAGAGCGCCAGAGTATTTCCCGCCATACCTTGATGTGGCTACTACTTGCCAATATTGCCATTTTATCTCCGCTC
TATGAGCAGGTCACGCTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MQNQTKIKTKLNRQWQTWISRRLPAREQITLSHKSIFILPTGFGLAWLVLLVVLFLFGTNYQNNLVMGLSFLLLSIFNTC
IIYSYKNLAGLSLSSSKANNTVAGQAIYFPINLSCPNRAYEVQLNFQNQPLEVVKKVSEHQTQALVTYNKAHRGINHPGR
VKIETRYPLGLFRAWSHIDLAQAQLVYAEPVIDPNPVYLNSDHTSEQQDTGKYVAGIDEYKGLREYVLGESLKQVAWKQW
AQGRGMLTKEFEEPQGAPMWLSLDPKSNDIELALSHLAWHTEQLSAKRQVFGLKIGGSTIHPSHGEHHRNKVQTQLALYP
SSSPHPNPSPKYAPKAGL

Sequences:

>Translated_338_residues
MQNQTKIKTKLNRQWQTWISRRLPAREQITLSHKSIFILPTGFGLAWLVLLVVLFLFGTNYQNNLVMGLSFLLLSIFNTC
IIYSYKNLAGLSLSSSKANNTVAGQAIYFPINLSCPNRAYEVQLNFQNQPLEVVKKVSEHQTQALVTYNKAHRGINHPGR
VKIETRYPLGLFRAWSHIDLAQAQLVYAEPVIDPNPVYLNSDHTSEQQDTGKYVAGIDEYKGLREYVLGESLKQVAWKQW
AQGRGMLTKEFEEPQGAPMWLSLDPKSNDIELALSHLAWHTEQLSAKRQVFGLKIGGSTIHPSHGEHHRNKVQTQLALYP
SSSPHPNPSPKYAPKAGL
>Mature_338_residues
MQNQTKIKTKLNRQWQTWISRRLPAREQITLSHKSIFILPTGFGLAWLVLLVVLFLFGTNYQNNLVMGLSFLLLSIFNTC
IIYSYKNLAGLSLSSSKANNTVAGQAIYFPINLSCPNRAYEVQLNFQNQPLEVVKKVSEHQTQALVTYNKAHRGINHPGR
VKIETRYPLGLFRAWSHIDLAQAQLVYAEPVIDPNPVYLNSDHTSEQQDTGKYVAGIDEYKGLREYVLGESLKQVAWKQW
AQGRGMLTKEFEEPQGAPMWLSLDPKSNDIELALSHLAWHTEQLSAKRQVFGLKIGGSTIHPSHGEHHRNKVQTQLALYP
SSSPHPNPSPKYAPKAGL

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38194; Mature: 38194

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNQTKIKTKLNRQWQTWISRRLPAREQITLSHKSIFILPTGFGLAWLVLLVVLFLFGTN
CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHHCCC
YQNNLVMGLSFLLLSIFNTCIIYSYKNLAGLSLSSSKANNTVAGQAIYFPINLSCPNRAY
CCCCHHHHHHHHHHHHHHHHHEEECCCCCCCEECCCCCCCCEECEEEEEEEEECCCCCEE
EVQLNFQNQPLEVVKKVSEHQTQALVTYNKAHRGINHPGRVKIETRYPLGLFRAWSHIDL
EEEEECCCCCHHHHHHHHHHHHHHEEEEHHHHCCCCCCCEEEEEEECCHHHHHHHCCCCH
AQAQLVYAEPVIDPNPVYLNSDHTSEQQDTGKYVAGIDEYKGLREYVLGESLKQVAWKQW
HHHEEEEECCCCCCCCEEECCCCCCCHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH
AQGRGMLTKEFEEPQGAPMWLSLDPKSNDIELALSHLAWHTEQLSAKRQVFGLKIGGSTI
HCCCCCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCEE
HPSHGEHHRNKVQTQLALYPSSSPHPNPSPKYAPKAGL
CCCCCHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQNQTKIKTKLNRQWQTWISRRLPAREQITLSHKSIFILPTGFGLAWLVLLVVLFLFGTN
CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHHCCC
YQNNLVMGLSFLLLSIFNTCIIYSYKNLAGLSLSSSKANNTVAGQAIYFPINLSCPNRAY
CCCCHHHHHHHHHHHHHHHHHEEECCCCCCCEECCCCCCCCEECEEEEEEEEECCCCCEE
EVQLNFQNQPLEVVKKVSEHQTQALVTYNKAHRGINHPGRVKIETRYPLGLFRAWSHIDL
EEEEECCCCCHHHHHHHHHHHHHHEEEEHHHHCCCCCCCEEEEEEECCHHHHHHHCCCCH
AQAQLVYAEPVIDPNPVYLNSDHTSEQQDTGKYVAGIDEYKGLREYVLGESLKQVAWKQW
HHHEEEEECCCCCCCCEEECCCCCCCHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH
AQGRGMLTKEFEEPQGAPMWLSLDPKSNDIELALSHLAWHTEQLSAKRQVFGLKIGGSTI
HCCCCCCHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCEE
HPSHGEHHRNKVQTQLALYPSSSPHPNPSPKYAPKAGL
CCCCCHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA