Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157961700

Identifier: 157961700

GI number: 157961700

Start: 2287728

End: 2288087

Strand: Direct

Name: 157961700

Synonym: Spea_1876

Alternate gene names: NA

Gene position: 2287728-2288087 (Clockwise)

Preceding gene: 157961699

Following gene: 157961703

Centisome position: 44.21

GC content: 41.67

Gene sequence:

>360_bases
ATGAATAACTCTACTTTACAAGGTTACGTGGCGAGCCTATACACTCAGTACGCGAAGGATCTTAAATTAGGTGAGCATTA
TGTTTCAGATAAGCGCTTGCAAGAGTTTGTTAGCGAGCTAGAAATTAGCGGTATTTTGTTAGCACAGTTTAACTGGGATG
AATGGTATCAAAATAGCCATTTAGTGGACCGCCCTGAGTATATCGCCGATGCATCATTCTATGAATGTCAGTTACTGTTA
ACGGCAATGGCGCGCCTCGATAGGTTCAGTCCTGGCATATTAAGTAATATGCGATGCCAAGGGGTATTAATTGCCATTCT
AGAGCGCTTTCAAACCCTTTATTATAAGCAAGCCGTTTGA

Upstream 100 bases:

>100_bases
TCAAAACTTGGTACAGCAAATGCAACCTTAACAGTATGGCCCATAGGGCTGCAATTGAAGTTAAAGGCACTCAGGTACCA
AGGTTAGCTGGAGGTTTAAG

Downstream 100 bases:

>100_bases
AAAGATAATGTTATGTGATGCTATAAATTGAAAGCAGCTAAACTGATTAGCTTAGGCAGAAGAGCTTAAACAAAAGAGCT
TAGACACAAGAACTTAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MNNSTLQGYVASLYTQYAKDLKLGEHYVSDKRLQEFVSELEISGILLAQFNWDEWYQNSHLVDRPEYIADASFYECQLLL
TAMARLDRFSPGILSNMRCQGVLIAILERFQTLYYKQAV

Sequences:

>Translated_119_residues
MNNSTLQGYVASLYTQYAKDLKLGEHYVSDKRLQEFVSELEISGILLAQFNWDEWYQNSHLVDRPEYIADASFYECQLLL
TAMARLDRFSPGILSNMRCQGVLIAILERFQTLYYKQAV
>Mature_119_residues
MNNSTLQGYVASLYTQYAKDLKLGEHYVSDKRLQEFVSELEISGILLAQFNWDEWYQNSHLVDRPEYIADASFYECQLLL
TAMARLDRFSPGILSNMRCQGVLIAILERFQTLYYKQAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13871; Mature: 13871

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSTLQGYVASLYTQYAKDLKLGEHYVSDKRLQEFVSELEISGILLAQFNWDEWYQNSH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHCCCC
LVDRPEYIADASFYECQLLLTAMARLDRFSPGILSNMRCQGVLIAILERFQTLYYKQAV
CCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNNSTLQGYVASLYTQYAKDLKLGEHYVSDKRLQEFVSELEISGILLAQFNWDEWYQNSH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHCCCC
LVDRPEYIADASFYECQLLLTAMARLDRFSPGILSNMRCQGVLIAILERFQTLYYKQAV
CCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA