| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961666
Identifier: 157961666
GI number: 157961666
Start: 2240933
End: 2241559
Strand: Direct
Name: 157961666
Synonym: Spea_1842
Alternate gene names: NA
Gene position: 2240933-2241559 (Clockwise)
Preceding gene: 157961665
Following gene: 157961667
Centisome position: 43.31
GC content: 45.3
Gene sequence:
>627_bases ATGACCAGTGCACTGGTGGTGCTGTTATTGAGTGCCTCCTTGGTTAGATCTGTGGCTGACGGAATATTGGAGTCCTTTCT TGAGGGGATCATAACCCTCACTTTTTTAGTTTGTATTGTTAGCTTAAAGGTCGATACAAACTGGAAGCGCTTCATGTCAG GCCTTATCTTTGTCTGGCTGTTGACGGCTATCGTAAAGCGGTTTGTTACCATTCCCCATATCGACCTCTTTATGCTGGCC TTAATGTTCGCTTTTTTTTGGGGCACCTTTAACTCTATCGCTCGGCAAATACTTTTCACGGGTTCAGTTAACGGTAACAA AGTCGTTGGCTCGATAGCACTTTTTCTGCTTCTTGGACTCATGTGGTCCTTGGTTTATCTGTTGATTTTAGCGTTATCGC CGGGAGCATTTTCAGGTATCGAACATAGCGCGTGGGGGCAAAATTTTTCGCAAATGGCGTATTTTAGCTTCGTCACGTTG ACGACATTAGGTTACGGCGATATCAGTCCTAATACGCCTTTTGCCCAAGTCGCAGTATATATGGAGGCCATTGCCGGAGT GTTTTACATGGCAATTGTCGTTGCAAGTTTGGTGAGCGCAGGATTGGCTCAAAAAGACACCCAATAG
Upstream 100 bases:
>100_bases GCTAAACCACTTCGCTCAATTTATTGCTGAGTAAAGATAACGGCTAAGGAATTGCCAGTTGACTGATAAAAGAATTAATA AACAGAATAATTTTTACTAT
Downstream 100 bases:
>100_bases GAACGTTAATATGGAAAACCCAATGCAACATACTCAAAGTAAATTGTTCGTCAATAATATGATGGAATCGGCGATTCGAA TAGGCTTGCTGTTTATGCTG
Product: Ion transport 2 domain-containing protein
Products: NA
Alternate protein names: Ion Transport 2 Domain Protein; Ion Channel Family Protein; Ion Transport Family Protein; Potassium Channel; Ion Channel; Voltage-Dependent Potassium Channel; Ion Channel Protein; K+ Channel Protein
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTSALVVLLLSASLVRSVADGILESFLEGIITLTFLVCIVSLKVDTNWKRFMSGLIFVWLLTAIVKRFVTIPHIDLFMLA LMFAFFWGTFNSIARQILFTGSVNGNKVVGSIALFLLLGLMWSLVYLLILALSPGAFSGIEHSAWGQNFSQMAYFSFVTL TTLGYGDISPNTPFAQVAVYMEAIAGVFYMAIVVASLVSAGLAQKDTQ
Sequences:
>Translated_208_residues MTSALVVLLLSASLVRSVADGILESFLEGIITLTFLVCIVSLKVDTNWKRFMSGLIFVWLLTAIVKRFVTIPHIDLFMLA LMFAFFWGTFNSIARQILFTGSVNGNKVVGSIALFLLLGLMWSLVYLLILALSPGAFSGIEHSAWGQNFSQMAYFSFVTL TTLGYGDISPNTPFAQVAVYMEAIAGVFYMAIVVASLVSAGLAQKDTQ >Mature_207_residues TSALVVLLLSASLVRSVADGILESFLEGIITLTFLVCIVSLKVDTNWKRFMSGLIFVWLLTAIVKRFVTIPHIDLFMLAL MFAFFWGTFNSIARQILFTGSVNGNKVVGSIALFLLLGLMWSLVYLLILALSPGAFSGIEHSAWGQNFSQMAYFSFVTLT TLGYGDISPNTPFAQVAVYMEAIAGVFYMAIVVASLVSAGLAQKDTQ
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22687; Mature: 22556
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSALVVLLLSASLVRSVADGILESFLEGIITLTFLVCIVSLKVDTNWKRFMSGLIFVWL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LTAIVKRFVTIPHIDLFMLALMFAFFWGTFNSIARQILFTGSVNGNKVVGSIALFLLLGL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH MWSLVYLLILALSPGAFSGIEHSAWGQNFSQMAYFSFVTLTTLGYGDISPNTPFAQVAVY HHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH MEAIAGVFYMAIVVASLVSAGLAQKDTQ HHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TSALVVLLLSASLVRSVADGILESFLEGIITLTFLVCIVSLKVDTNWKRFMSGLIFVWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LTAIVKRFVTIPHIDLFMLALMFAFFWGTFNSIARQILFTGSVNGNKVVGSIALFLLLGL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH MWSLVYLLILALSPGAFSGIEHSAWGQNFSQMAYFSFVTLTTLGYGDISPNTPFAQVAVY HHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH MEAIAGVFYMAIVVASLVSAGLAQKDTQ HHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA