| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961651
Identifier: 157961651
GI number: 157961651
Start: 2225993
End: 2226382
Strand: Direct
Name: 157961651
Synonym: Spea_1827
Alternate gene names: NA
Gene position: 2225993-2226382 (Clockwise)
Preceding gene: 157961650
Following gene: 157961652
Centisome position: 43.02
GC content: 46.41
Gene sequence:
>390_bases ATGAAAAAGCTTTTATTGGGACTCGTTACCGCTGTGATGATTACGGCGTGCGCTCCACATACTGCTGGCGTTATGGCGGG GTCGAATGGGGAGGTGCGTGTAGATAACAACAGTTTTGGCAAAGAGGTACAAGTTAGCAATATCATGGCGCGTCCCGAAG GTGGTTTTTTACGTGGTACAGGCACCATTGCCAGTCAAGTATCAACCGACTTAAGATTGCAGTATAAGTTTACCTGGTTT GATCTCAATGGCATGACTATTGACGATGAAGGAGTCAGCTGGAAGTCGATTAAGTTACACGGTAAACAGCAGATGCAGGT GAGCGCCGTCGCGCCTAATGCTACAGCCACTCGTTTCGAACTTTATGTTCGCAAAGCATTTTCTAATTAA
Upstream 100 bases:
>100_bases AACATCTTATTGCAACTGCGAGGGCACACTTTTTAATCGATTAATCAAATGTTTAATTGTATAACTCGTATTAGCTATTA GCTCAAAATAGGGGACAATC
Downstream 100 bases:
>100_bases GATAATGTCAGTGTTAACTTAAGTCACCAACGTAAAAAAACGTCAGCTAAGCTGACGTTTTTTTATGCATAGCGTTCATA TTTCTTAAGAAGACTGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MKKLLLGLVTAVMITACAPHTAGVMAGSNGEVRVDNNSFGKEVQVSNIMARPEGGFLRGTGTIASQVSTDLRLQYKFTWF DLNGMTIDDEGVSWKSIKLHGKQQMQVSAVAPNATATRFELYVRKAFSN
Sequences:
>Translated_129_residues MKKLLLGLVTAVMITACAPHTAGVMAGSNGEVRVDNNSFGKEVQVSNIMARPEGGFLRGTGTIASQVSTDLRLQYKFTWF DLNGMTIDDEGVSWKSIKLHGKQQMQVSAVAPNATATRFELYVRKAFSN >Mature_129_residues MKKLLLGLVTAVMITACAPHTAGVMAGSNGEVRVDNNSFGKEVQVSNIMARPEGGFLRGTGTIASQVSTDLRLQYKFTWF DLNGMTIDDEGVSWKSIKLHGKQQMQVSAVAPNATATRFELYVRKAFSN
Specific function: Unknown
COG id: COG5633
COG function: function code R; Predicted periplasmic lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14026; Mature: 14026
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLLGLVTAVMITACAPHTAGVMAGSNGEVRVDNNSFGKEVQVSNIMARPEGGFLRGT CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCCCCEEEEEEEEECCCCCEEEEC GTIASQVSTDLRLQYKFTWFDLNGMTIDDEGVSWKSIKLHGKQQMQVSAVAPNATATRFE CCHHHHCCCCEEEEEEEEEEECCCEEECCCCCCEEEEEECCCCCEEEEEECCCCCHHHHH LYVRKAFSN EEEEEHHCC >Mature Secondary Structure MKKLLLGLVTAVMITACAPHTAGVMAGSNGEVRVDNNSFGKEVQVSNIMARPEGGFLRGT CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCCCCCCEEEEEEEEECCCCCEEEEC GTIASQVSTDLRLQYKFTWFDLNGMTIDDEGVSWKSIKLHGKQQMQVSAVAPNATATRFE CCHHHHCCCCEEEEEEEEEEECCCEEECCCCCCEEEEEECCCCCEEEEEECCCCCHHHHH LYVRKAFSN EEEEEHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA