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The map label for this gene is viuA [H]

Identifier: 157961652

GI number: 157961652

Start: 2226691

End: 2228829

Strand: Direct

Name: viuA [H]

Synonym: Spea_1828

Alternate gene names: 157961652

Gene position: 2226691-2228829 (Clockwise)

Preceding gene: 157961651

Following gene: 157961653

Centisome position: 43.03

GC content: 45.68

Gene sequence:

>2139_bases
ATGTTAACTCTAAAAACTTATTCGCCAGTCGCCCTCGCGATTATTGCTGCTATTTCCTCTCCCAATGCACTTGCTAATGA
GCTGGGTTCACCTGTGAGCGATGACATCGAAGTCATGGTGGTCACTTCCGACTTTCGCGGCAGCGCACTCGAAAAAATGC
CATCGAGTGTCACAGTTATCGATCAGCAGCAAATTGAAGATGAGGGAGCGCAGCACTTCGAAGATATCCTCAATAATATC
GCCAACTTTAACTGGTCTGGTGGTAGCTCTCGGCCTAAGTATTTCCAAATTCGTGGTGTCGGCGAGCAGGAAGAGTACCA
AGGCGCACCAAATTCTTCAGTAGGCTTTGTGGTTGATGATATCGATCTGTCTGGTTTAGGCATGGTGTCTAGCATGTATG
ACTTGCAACAAGTTGAAGTGCTACGAGGGCCTCAGGGGACACGTTATGGGGCTAATGCACTAGCGGGTCTTATCTATCTG
AAGAGCAATGATCCAACGGATGTTTTTGAAAATGGGGCAGAGGTGTCATTGGGTGATGACAATCTACAAACCTTCAGTGG
TTTCAGCTCTGGTCCGTTAACCGATTCTGGCAATCTGCTTTATCGTGTCTCACTGCAGCAACATCAACAAGATGGCTACC
GAGACAATCTTTATCTTGACCGTAGCGACACCAATAACCGCGATGAATTTACCGGCCGCGCAAAACTTCGTTGGTACGCA
ACCGATGACTTAGCAATTGATTTAACCTTGCTGCATGCCAACTACGACAATGGTTATGACGCCTGGACATTAGACAATAA
TGGCTTCGATACCTTAACCGATGCTCCGGGTGAGGATAAACAGCGCACTACGGGCTCTTCACTTAAGTTTACCTATACAG
GTGCACAGAATTTCGAGCTGACCTCTCTCACATCATTTGCAAATTCTGATACTCGTCATAATTACGATGGTGACTGGGCA
AATCCTGATTATTGGGAAAGTCGAGATTGCGGTGGTGTGCCTTGTGAATATGAATATAACTGGGATAAGAAAGGCGAAAG
AAAGACTGTAACTCAAGAGTTTAGATTATCTTCTACCGAATCGGGTCGCATTTTTGCCGATAGTACCGACTGGCTAATTG
GCGTTTATGGCATGGATCTGCAAGAGGATAACGAAACCATAGACAGTTACAGTCAGTTATCCGCCGAGTATGAGGCGCGA
AATTACGCCGTGTTTGCTCAATTAGACTCTGATTTAGGCGCAAGTTATGCACTTTCCGTCGGTCTGCGTGCCGAGCGTAG
AGACAGTGATTATAGTGACTCAGCAGGCGACAGTTTTGATCCAAGTGAAACCATGTGGGGCGGCCATATTGCCCTTAGCA
AGGCGTTAGCTGAAAACCATGAGTCATACATACGTGTGGCACGTGGCTATAAAGCCGGTGGCTTTAACATGTCGCTACCG
ATTGAGTTAGCTGACAAGAAAGAATACGACACAGAGATCCTTTACAACTATGAGATAGGTTTGAAGTCTACTTGGCTAGA
TGGTCAGGCAAGCACTAACTTAGCGCTATTCTATATGGATAGACAAGATCAGCAGGTGGCGGCGTCACAGCAATCAACTG
TGCCGGGTGAAGAGGGTAACTTTATTCTGTTTACCGAAAATGCAGGTAGCTCACATAACTATGGGGCTGAATTAGAGGGT
AATTGGTACGCGACCGATAACCTGAATTTATACGGCAGTGTCGGCTGGCTTGAAACCGAATATGGTGATTACCAGTACGA
AGATAAGTATGGCACCCTGGTTGATCTATCTGGTCGAGAACTTGCGCACTCACCTAACTTTACCTTCAGCCTAGGGGCAA
CTTACCGTAGTGACAACGGCTGGTTTGCAAACCTTAACACTAGCGGTAAGAGTGATTTTTACTACTCAGACAGTAATGAA
TCTAAATCTGATGCGTATCAGATTTTTAATGCCAAATTGGGTTACGAGGCTGACATCTGGTCTGTTTACCTGTGGGGGCG
TAATTTATTTGATGAAAAATACGGTGTTCGCGGTTTCTACTTCGGTAATGAACCCGATTTAGATTGGGCCGATAAGCAAT
ATATACGTTATGGCGATCCGCGCCAGATTGGTATGACGTTTAACGTTAAGTTTTTGTAA

Upstream 100 bases:

>100_bases
GAACCTGATCCGGCTAATACCGGCGTAGGAATGGGCCACAATTCATTTTCCGATCGCTTCTTTACGTTGCCGGATCTCAA
ATTTTTAATTTTGAGGTCCT

Downstream 100 bases:

>100_bases
GACAGGATATTTAATCTAAACAACATTGAGCCGCACCCGAGTGCGGCTGAGGTCAATAAAATGAAATTAACAGCAGAAAT
TAGTTGCTACCCACTACAAG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 712; Mature: 712

Protein sequence:

>712_residues
MLTLKTYSPVALAIIAAISSPNALANELGSPVSDDIEVMVVTSDFRGSALEKMPSSVTVIDQQQIEDEGAQHFEDILNNI
ANFNWSGGSSRPKYFQIRGVGEQEEYQGAPNSSVGFVVDDIDLSGLGMVSSMYDLQQVEVLRGPQGTRYGANALAGLIYL
KSNDPTDVFENGAEVSLGDDNLQTFSGFSSGPLTDSGNLLYRVSLQQHQQDGYRDNLYLDRSDTNNRDEFTGRAKLRWYA
TDDLAIDLTLLHANYDNGYDAWTLDNNGFDTLTDAPGEDKQRTTGSSLKFTYTGAQNFELTSLTSFANSDTRHNYDGDWA
NPDYWESRDCGGVPCEYEYNWDKKGERKTVTQEFRLSSTESGRIFADSTDWLIGVYGMDLQEDNETIDSYSQLSAEYEAR
NYAVFAQLDSDLGASYALSVGLRAERRDSDYSDSAGDSFDPSETMWGGHIALSKALAENHESYIRVARGYKAGGFNMSLP
IELADKKEYDTEILYNYEIGLKSTWLDGQASTNLALFYMDRQDQQVAASQQSTVPGEEGNFILFTENAGSSHNYGAELEG
NWYATDNLNLYGSVGWLETEYGDYQYEDKYGTLVDLSGRELAHSPNFTFSLGATYRSDNGWFANLNTSGKSDFYYSDSNE
SKSDAYQIFNAKLGYEADIWSVYLWGRNLFDEKYGVRGFYFGNEPDLDWADKQYIRYGDPRQIGMTFNVKFL

Sequences:

>Translated_712_residues
MLTLKTYSPVALAIIAAISSPNALANELGSPVSDDIEVMVVTSDFRGSALEKMPSSVTVIDQQQIEDEGAQHFEDILNNI
ANFNWSGGSSRPKYFQIRGVGEQEEYQGAPNSSVGFVVDDIDLSGLGMVSSMYDLQQVEVLRGPQGTRYGANALAGLIYL
KSNDPTDVFENGAEVSLGDDNLQTFSGFSSGPLTDSGNLLYRVSLQQHQQDGYRDNLYLDRSDTNNRDEFTGRAKLRWYA
TDDLAIDLTLLHANYDNGYDAWTLDNNGFDTLTDAPGEDKQRTTGSSLKFTYTGAQNFELTSLTSFANSDTRHNYDGDWA
NPDYWESRDCGGVPCEYEYNWDKKGERKTVTQEFRLSSTESGRIFADSTDWLIGVYGMDLQEDNETIDSYSQLSAEYEAR
NYAVFAQLDSDLGASYALSVGLRAERRDSDYSDSAGDSFDPSETMWGGHIALSKALAENHESYIRVARGYKAGGFNMSLP
IELADKKEYDTEILYNYEIGLKSTWLDGQASTNLALFYMDRQDQQVAASQQSTVPGEEGNFILFTENAGSSHNYGAELEG
NWYATDNLNLYGSVGWLETEYGDYQYEDKYGTLVDLSGRELAHSPNFTFSLGATYRSDNGWFANLNTSGKSDFYYSDSNE
SKSDAYQIFNAKLGYEADIWSVYLWGRNLFDEKYGVRGFYFGNEPDLDWADKQYIRYGDPRQIGMTFNVKFL
>Mature_712_residues
MLTLKTYSPVALAIIAAISSPNALANELGSPVSDDIEVMVVTSDFRGSALEKMPSSVTVIDQQQIEDEGAQHFEDILNNI
ANFNWSGGSSRPKYFQIRGVGEQEEYQGAPNSSVGFVVDDIDLSGLGMVSSMYDLQQVEVLRGPQGTRYGANALAGLIYL
KSNDPTDVFENGAEVSLGDDNLQTFSGFSSGPLTDSGNLLYRVSLQQHQQDGYRDNLYLDRSDTNNRDEFTGRAKLRWYA
TDDLAIDLTLLHANYDNGYDAWTLDNNGFDTLTDAPGEDKQRTTGSSLKFTYTGAQNFELTSLTSFANSDTRHNYDGDWA
NPDYWESRDCGGVPCEYEYNWDKKGERKTVTQEFRLSSTESGRIFADSTDWLIGVYGMDLQEDNETIDSYSQLSAEYEAR
NYAVFAQLDSDLGASYALSVGLRAERRDSDYSDSAGDSFDPSETMWGGHIALSKALAENHESYIRVARGYKAGGFNMSLP
IELADKKEYDTEILYNYEIGLKSTWLDGQASTNLALFYMDRQDQQVAASQQSTVPGEEGNFILFTENAGSSHNYGAELEG
NWYATDNLNLYGSVGWLETEYGDYQYEDKYGTLVDLSGRELAHSPNFTFSLGATYRSDNGWFANLNTSGKSDFYYSDSNE
SKSDAYQIFNAKLGYEADIWSVYLWGRNLFDEKYGVRGFYFGNEPDLDWADKQYIRYGDPRQIGMTFNVKFL

Specific function: Receptor for ferric vibriobactin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1788478, Length=246, Percent_Identity=25.609756097561, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug [H]

EC number: NA

Molecular weight: Translated: 79662; Mature: 79662

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLKTYSPVALAIIAAISSPNALANELGSPVSDDIEVMVVTSDFRGSALEKMPSSVTVI
CEEEECCCCHHEEHHHHHCCCHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHCCCCEEEE
DQQQIEDEGAQHFEDILNNIANFNWSGGSSRPKYFQIRGVGEQEEYQGAPNSSVGFVVDD
EHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCEEEEEC
IDLSGLGMVSSMYDLQQVEVLRGPQGTRYGANALAGLIYLKSNDPTDVFENGAEVSLGDD
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHCCCEEEECCC
NLQTFSGFSSGPLTDSGNLLYRVSLQQHQQDGYRDNLYLDRSDTNNRDEFTGRAKLRWYA
CCHHHCCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEE
TDDLAIDLTLLHANYDNGYDAWTLDNNGFDTLTDAPGEDKQRTTGSSLKFTYTGAQNFEL
CCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEE
TSLTSFANSDTRHNYDGDWANPDYWESRDCGGVPCEYEYNWDKKGERKTVTQEFRLSSTE
EEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCC
SGRIFADSTDWLIGVYGMDLQEDNETIDSYSQLSAEYEARNYAVFAQLDSDLGASYALSV
CCEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEE
GLRAERRDSDYSDSAGDSFDPSETMWGGHIALSKALAENHESYIRVARGYKAGGFNMSLP
CCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHEECCCCCCCCCEEEE
IELADKKEYDTEILYNYEIGLKSTWLDGQASTNLALFYMDRQDQQVAASQQSTVPGEEGN
EEECCCCCCCCEEEEEEEECCEEEECCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCC
FILFTENAGSSHNYGAELEGNWYATDNLNLYGSVGWLETEYGDYQYEDKYGTLVDLSGRE
EEEEECCCCCCCCCCCEECCCEEEECCCEEEEECCEEEECCCCEEEECCCCCEEECCCCH
LAHSPNFTFSLGATYRSDNGWFANLNTSGKSDFYYSDSNESKSDAYQIFNAKLGYEADIW
HCCCCCEEEEECCEEECCCCEEEEECCCCCCCEEECCCCCCCCHHHEEEECCCCCCCCEE
SVYLWGRNLFDEKYGVRGFYFGNEPDLDWADKQYIRYGDPRQIGMTFNVKFL
EEEEECCCHHHHCCCCEEEECCCCCCCCCCCCHHEECCCCCEEEEEEEEEEC
>Mature Secondary Structure
MLTLKTYSPVALAIIAAISSPNALANELGSPVSDDIEVMVVTSDFRGSALEKMPSSVTVI
CEEEECCCCHHEEHHHHHCCCHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHCCCCEEEE
DQQQIEDEGAQHFEDILNNIANFNWSGGSSRPKYFQIRGVGEQEEYQGAPNSSVGFVVDD
EHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCEEEEEC
IDLSGLGMVSSMYDLQQVEVLRGPQGTRYGANALAGLIYLKSNDPTDVFENGAEVSLGDD
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHCCCEEEECCC
NLQTFSGFSSGPLTDSGNLLYRVSLQQHQQDGYRDNLYLDRSDTNNRDEFTGRAKLRWYA
CCHHHCCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEE
TDDLAIDLTLLHANYDNGYDAWTLDNNGFDTLTDAPGEDKQRTTGSSLKFTYTGAQNFEL
CCCEEEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEE
TSLTSFANSDTRHNYDGDWANPDYWESRDCGGVPCEYEYNWDKKGERKTVTQEFRLSSTE
EEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHCCCCCC
SGRIFADSTDWLIGVYGMDLQEDNETIDSYSQLSAEYEARNYAVFAQLDSDLGASYALSV
CCEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEEE
GLRAERRDSDYSDSAGDSFDPSETMWGGHIALSKALAENHESYIRVARGYKAGGFNMSLP
CCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHEECCCCCCCCCEEEE
IELADKKEYDTEILYNYEIGLKSTWLDGQASTNLALFYMDRQDQQVAASQQSTVPGEEGN
EEECCCCCCCCEEEEEEEECCEEEECCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCC
FILFTENAGSSHNYGAELEGNWYATDNLNLYGSVGWLETEYGDYQYEDKYGTLVDLSGRE
EEEEECCCCCCCCCCCEECCCEEEECCCEEEEECCEEEECCCCEEEECCCCCEEECCCCH
LAHSPNFTFSLGATYRSDNGWFANLNTSGKSDFYYSDSNESKSDAYQIFNAKLGYEADIW
HCCCCCEEEEECCEEECCCCEEEEECCCCCCCEEECCCCCCCCHHHEEEECCCCCCCCEE
SVYLWGRNLFDEKYGVRGFYFGNEPDLDWADKQYIRYGDPRQIGMTFNVKFL
EEEEECCCHHHHCCCCEEEECCCCCCCCCCCCHHEECCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1317381 [H]