Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157961650

Identifier: 157961650

GI number: 157961650

Start: 2225430

End: 2225936

Strand: Direct

Name: 157961650

Synonym: Spea_1826

Alternate gene names: NA

Gene position: 2225430-2225936 (Clockwise)

Preceding gene: 157961649

Following gene: 157961651

Centisome position: 43.01

GC content: 43.79

Gene sequence:

>507_bases
ATGACAATGCATGATGAGCCAAAATCTGCGGTGGGTATAGAGCAAGATGACTCTGCTCATGATGAAACCGGTAAGCTAGA
TGTAAAAAGCATCGTCAAAAAGGCAAAAGAGCTTAATGACTTCGGCCATTTGCTTGAGCACGTACCCTATGCCAAGTTTA
TCGGTATGGCGGTGGAGCGTTTTGGCGACGAATTGGTATTTAAGCTGCCAGCCAAAGATGACAACATAGGTAACCCAATA
TTACCTGCACTTCATGGTGGGGTGATTGCCGGCTTTATGGAGATGTCTGCAATTGTGCAATTAATGGTGTTTATGCAGAC
GAGCAAGGTACCTAAGGTAGTGGATTTTTCTATCGATTACTTAAGAGCGGGTTACCACAAAGACAGCTTTGCCGAGTGTA
AAATTACTCGTCAGGGGCGCCGAGTCGCTAATGTGAATATTAATTGTTGGCAAACCAATCGCAAACATCTTATTGCAACT
GCGAGGGCACACTTTTTAATCGATTAA

Upstream 100 bases:

>100_bases
TCCATTGATAATCCTATTGCTCATGCAGTTGGCTCGTTTATGCGGATCAGTCCTGAGATGGTCGGTGAAGAGTTTCGATT
GGCGTTAATGGGAGAAGCTG

Downstream 100 bases:

>100_bases
TCAAATGTTTAATTGTATAACTCGTATTAGCTATTAGCTCAAAATAGGGGACAATCATGAAAAAGCTTTTATTGGGACTC
GTTACCGCTGTGATGATTAC

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase Family Protein; Phenylacetic Acid Degradation-Related Protein; Thioesterase Superfamily; Phenylacetic Acid Degradation-Like Protein; Thioesterase Family Protein Domain Protein; Protein Possibly Involved In Aromatic Compounds Catabolism

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTMHDEPKSAVGIEQDDSAHDETGKLDVKSIVKKAKELNDFGHLLEHVPYAKFIGMAVERFGDELVFKLPAKDDNIGNPI
LPALHGGVIAGFMEMSAIVQLMVFMQTSKVPKVVDFSIDYLRAGYHKDSFAECKITRQGRRVANVNINCWQTNRKHLIAT
ARAHFLID

Sequences:

>Translated_168_residues
MTMHDEPKSAVGIEQDDSAHDETGKLDVKSIVKKAKELNDFGHLLEHVPYAKFIGMAVERFGDELVFKLPAKDDNIGNPI
LPALHGGVIAGFMEMSAIVQLMVFMQTSKVPKVVDFSIDYLRAGYHKDSFAECKITRQGRRVANVNINCWQTNRKHLIAT
ARAHFLID
>Mature_167_residues
TMHDEPKSAVGIEQDDSAHDETGKLDVKSIVKKAKELNDFGHLLEHVPYAKFIGMAVERFGDELVFKLPAKDDNIGNPIL
PALHGGVIAGFMEMSAIVQLMVFMQTSKVPKVVDFSIDYLRAGYHKDSFAECKITRQGRRVANVNINCWQTNRKHLIATA
RAHFLID

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18822; Mature: 18691

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMHDEPKSAVGIEQDDSAHDETGKLDVKSIVKKAKELNDFGHLLEHVPYAKFIGMAVER
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
FGDELVFKLPAKDDNIGNPILPALHGGVIAGFMEMSAIVQLMVFMQTSKVPKVVDFSIDY
CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH
LRAGYHKDSFAECKITRQGRRVANVNINCWQTNRKHLIATARAHFLID
HHHCCCCCCHHHEEEECCCCEEEEEEEEEEECCCCEEEEEHHHHEECC
>Mature Secondary Structure 
TMHDEPKSAVGIEQDDSAHDETGKLDVKSIVKKAKELNDFGHLLEHVPYAKFIGMAVER
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
FGDELVFKLPAKDDNIGNPILPALHGGVIAGFMEMSAIVQLMVFMQTSKVPKVVDFSIDY
CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHH
LRAGYHKDSFAECKITRQGRRVANVNINCWQTNRKHLIATARAHFLID
HHHCCCCCCHHHEEEECCCCEEEEEEEEEEECCCCEEEEEHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA