| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157961649
Identifier: 157961649
GI number: 157961649
Start: 2224937
End: 2225443
Strand: Direct
Name: 157961649
Synonym: Spea_1825
Alternate gene names: NA
Gene position: 2224937-2225443 (Clockwise)
Preceding gene: 157961648
Following gene: 157961650
Centisome position: 43.0
GC content: 46.15
Gene sequence:
>507_bases ATGAGTTTAACTAGTGAGCAGGGCTCATTAACAGGCATGGCGAGCCGGTTCGTTGAGCAGTTGACCCAATGCCGTAAACT TAAACTCAAAGTATTAGAAGCGAGTGGCAAAAAGGTGTTGATGGAGTTGCCTTATGACGCACAACTTGTCGGCTATCCTG ATACTGGCGTGATCCATGGTGGGGTGATCACCACCTTAATGGACACTGCAAGTGGTTGCGCCGTGGTGTGCTCTATTTTT GATAAGTTTCAATTATTAGAGATTTCTCCGACACTGGATCTACGTGTCGACTATATGAAGCCAGCCGAGCCCCACAAGCC TGTTTATGGTTTTGCCGAGTGTTATAAATTGTCTTCAAGTGTCGCCTTTACTCGCGCAATTGCTTATCAAGACTCCATTG ATAATCCTATTGCTCATGCAGTTGGCTCGTTTATGCGGATCAGTCCTGAGATGGTCGGTGAAGAGTTTCGATTGGCGTTA ATGGGAGAAGCTGATGACAATGCATGA
Upstream 100 bases:
>100_bases TGATCATGAACTGTAATCAGCACGCTGGACAGGAAGTGTTCCATATCCACATGCATTTACTCGGTGGTCAGCCATTAGGC CCAATGCTGAGCCCTGGTGC
Downstream 100 bases:
>100_bases TGAGCCAAAATCTGCGGTGGGTATAGAGCAAGATGACTCTGCTCATGATGAAACCGGTAAGCTAGATGTAAAAAGCATCG TCAAAAAGGCAAAAGAGCTT
Product: thioesterase superfamily protein
Products: NA
Alternate protein names: Thioesterase Family Protein; Phenylacetic Acid Degradation-Related Protein; Phenylacetic Acid Degradation-Like Protein; Thioesterase Superfamily; Thioesterase Family Protein Domain Protein; Conserved Domain Protein; Protein Possibly Involved In Aromatic Compounds Catabolism
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MSLTSEQGSLTGMASRFVEQLTQCRKLKLKVLEASGKKVLMELPYDAQLVGYPDTGVIHGGVITTLMDTASGCAVVCSIF DKFQLLEISPTLDLRVDYMKPAEPHKPVYGFAECYKLSSSVAFTRAIAYQDSIDNPIAHAVGSFMRISPEMVGEEFRLAL MGEADDNA
Sequences:
>Translated_168_residues MSLTSEQGSLTGMASRFVEQLTQCRKLKLKVLEASGKKVLMELPYDAQLVGYPDTGVIHGGVITTLMDTASGCAVVCSIF DKFQLLEISPTLDLRVDYMKPAEPHKPVYGFAECYKLSSSVAFTRAIAYQDSIDNPIAHAVGSFMRISPEMVGEEFRLAL MGEADDNA >Mature_167_residues SLTSEQGSLTGMASRFVEQLTQCRKLKLKVLEASGKKVLMELPYDAQLVGYPDTGVIHGGVITTLMDTASGCAVVCSIFD KFQLLEISPTLDLRVDYMKPAEPHKPVYGFAECYKLSSSVAFTRAIAYQDSIDNPIAHAVGSFMRISPEMVGEEFRLALM GEADDNA
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18334; Mature: 18203
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTSEQGSLTGMASRFVEQLTQCRKLKLKVLEASGKKVLMELPYDAQLVGYPDTGVIHG CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCEEEECCCCCEEEC GVITTLMDTASGCAVVCSIFDKFQLLEISPTLDLRVDYMKPAEPHKPVYGFAECYKLSSS HHHHHHHHCCCCHHHHHHHHCCEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHCH VAFTRAIAYQDSIDNPIAHAVGSFMRISPEMVGEEFRLALMGEADDNA HHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHCCCHHEEEEECCCCCCC >Mature Secondary Structure SLTSEQGSLTGMASRFVEQLTQCRKLKLKVLEASGKKVLMELPYDAQLVGYPDTGVIHG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCEEEECCCCCEEEC GVITTLMDTASGCAVVCSIFDKFQLLEISPTLDLRVDYMKPAEPHKPVYGFAECYKLSSS HHHHHHHHCCCCHHHHHHHHCCEEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHCH VAFTRAIAYQDSIDNPIAHAVGSFMRISPEMVGEEFRLALMGEADDNA HHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHCCCHHEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA