Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157961575
Identifier: 157961575
GI number: 157961575
Start: 2129017
End: 2129367
Strand: Direct
Name: 157961575
Synonym: Spea_1751
Alternate gene names: NA
Gene position: 2129017-2129367 (Clockwise)
Preceding gene: 157961573
Following gene: 157961576
Centisome position: 41.14
GC content: 40.17
Gene sequence:
>351_bases ATGTCTAGTCAAGAAACGTTCAAAGCATTTACTTCACAAGTTGAATCTGTCGTTAACCCATTTTACAGCTTCAATCAATT GGTCAGCAAAAACATAGAAACGCTTTCAAAGATCCAGCTAGAAAGTGTTCAAGCTTACAGTACGCTTGGAAATGAGACTC TGCAAAGCTTAGCGAATATTAAGCAGCCTCAAGATCTTGCATCACATAGTACAAAACAGATGGAAGTGATGAGCAAGTTC AGTCAACAGTTGCTTAAAGATGGACAAAAGCTGTCTCAGCTCAGCCAAGACTTCAAAACAGCTGCTGACGAATTGGCTGC ATCTTCTATTCCTGCGACAAAAAGTGCGTAA
Upstream 100 bases:
>100_bases GGCGGCAGGGGCTGTAATCAGTGTTTAACAAACAGTGGCACAAAGCTACTGCCACAAGGCGTTACTTAATTCGGAACTAA ACCAACACAAGGGAATTTAC
Downstream 100 bases:
>100_bases AGGGTAATAGTGTGGCGTGCTGCTTGGCTAAGAACTGCACGAGCAAAAGTGCGTCACCTTTTTATTAGTTTTAATTTGCC ACTAAGGACGCCATCATGGA
Product: phasin family protein
Products: NA
Alternate protein names: PHA Granule-Associated Protein
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MSSQETFKAFTSQVESVVNPFYSFNQLVSKNIETLSKIQLESVQAYSTLGNETLQSLANIKQPQDLASHSTKQMEVMSKF SQQLLKDGQKLSQLSQDFKTAADELAASSIPATKSA
Sequences:
>Translated_116_residues MSSQETFKAFTSQVESVVNPFYSFNQLVSKNIETLSKIQLESVQAYSTLGNETLQSLANIKQPQDLASHSTKQMEVMSKF SQQLLKDGQKLSQLSQDFKTAADELAASSIPATKSA >Mature_115_residues SSQETFKAFTSQVESVVNPFYSFNQLVSKNIETLSKIQLESVQAYSTLGNETLQSLANIKQPQDLASHSTKQMEVMSKFS QQLLKDGQKLSQLSQDFKTAADELAASSIPATKSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12753; Mature: 12622
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSQETFKAFTSQVESVVNPFYSFNQLVSKNIETLSKIQLESVQAYSTLGNETLQSLANI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KQPQDLASHSTKQMEVMSKFSQQLLKDGQKLSQLSQDFKTAADELAASSIPATKSA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SSQETFKAFTSQVESVVNPFYSFNQLVSKNIETLSKIQLESVQAYSTLGNETLQSLANI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KQPQDLASHSTKQMEVMSKFSQQLLKDGQKLSQLSQDFKTAADELAASSIPATKSA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA