Click here to switch to the map view.

The map label for this gene is ykgB [C]

Identifier: 157961079

GI number: 157961079

Start: 1524295

End: 1524732

Strand: Direct

Name: ykgB [C]

Synonym: Spea_1251

Alternate gene names: 157961079

Gene position: 1524295-1524732 (Clockwise)

Preceding gene: 157961078

Following gene: 157961081

Centisome position: 29.46

GC content: 38.36

Gene sequence:

>438_bases
ATGCAGCAGGAAAGAGGTTATTTAGTCGGTCTAGCAGGTGTTGTACTTACGCTATTATGGATTGGTGTATTTAAGTTTAC
TCCGACAGAGGCGGAAGCAATTAGGCCACTAGTTGAAAGCCACCCGTTAATGAACTGGATGTTCAGTATTTTAAGTGTCC
AAGGGGTGTCAAACCTAATTGGGGTTACTGAAATTATTGTCGCAATAGGTATGGTTGTTGGTATTTGGAAGCCGAAAATT
GGTTATTGGAGTGGCCTAGCTGCAATAGTTATCTTTATTACGACATTGAGCTTCCTTTTCACTTTACCCGGAGTTTGGAA
AATAGTTGATGGTGTACCTGTAACAGAGTTTTTCATATTTAAAGATGTCGTTTTCTTAGGTATTGCTTGGTTTAGTGTTG
AACGAAGTCGAGAACTTATGAATAAAGATAATAACTAA

Upstream 100 bases:

>100_bases
GACGGCTAATATATTTACCAATTATGCAAATCATTTAGCACAAACAGATATTGATTTTCCAGAAGTAAGCCTTACGGTTT
GATATTGAAAGGAGCCATTT

Downstream 100 bases:

>100_bases
GTCAAGGGTTTTATTAGGCGTCATTATATTATGGCGCCTTTGTTTTGATTTTAAAGCAAAGAGGTTGAGTGGCCCTTTGT
ATATATCATTTCTGTATGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MQQERGYLVGLAGVVLTLLWIGVFKFTPTEAEAIRPLVESHPLMNWMFSILSVQGVSNLIGVTEIIVAIGMVVGIWKPKI
GYWSGLAAIVIFITTLSFLFTLPGVWKIVDGVPVTEFFIFKDVVFLGIAWFSVERSRELMNKDNN

Sequences:

>Translated_145_residues
MQQERGYLVGLAGVVLTLLWIGVFKFTPTEAEAIRPLVESHPLMNWMFSILSVQGVSNLIGVTEIIVAIGMVVGIWKPKI
GYWSGLAAIVIFITTLSFLFTLPGVWKIVDGVPVTEFFIFKDVVFLGIAWFSVERSRELMNKDNN
>Mature_145_residues
MQQERGYLVGLAGVVLTLLWIGVFKFTPTEAEAIRPLVESHPLMNWMFSILSVQGVSNLIGVTEIIVAIGMVVGIWKPKI
GYWSGLAAIVIFITTLSFLFTLPGVWKIVDGVPVTEFFIFKDVVFLGIAWFSVERSRELMNKDNN

Specific function: Unknown

COG id: COG3059

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16207; Mature: 16207

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQERGYLVGLAGVVLTLLWIGVFKFTPTEAEAIRPLVESHPLMNWMFSILSVQGVSNLI
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GVTEIIVAIGMVVGIWKPKIGYWSGLAAIVIFITTLSFLFTLPGVWKIVDGVPVTEFFIF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHH
KDVVFLGIAWFSVERSRELMNKDNN
HHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQQERGYLVGLAGVVLTLLWIGVFKFTPTEAEAIRPLVESHPLMNWMFSILSVQGVSNLI
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GVTEIIVAIGMVVGIWKPKIGYWSGLAAIVIFITTLSFLFTLPGVWKIVDGVPVTEFFIF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHH
KDVVFLGIAWFSVERSRELMNKDNN
HHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA