Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157961078

Identifier: 157961078

GI number: 157961078

Start: 1523743

End: 1524276

Strand: Direct

Name: 157961078

Synonym: Spea_1250

Alternate gene names: NA

Gene position: 1523743-1524276 (Clockwise)

Preceding gene: 157961076

Following gene: 157961079

Centisome position: 29.45

GC content: 41.39

Gene sequence:

>534_bases
ATGAGCCGTATTCTTCCAGTATCAAATCCACCAGGTGATGTAGCGACGACGTTAGCAGCAATCAAAAGTAAGTTAGGAAT
GGTACCTAACCTTTATGCGACCATTGGTCATTCATCCACGGTGCTTAATGCGTACCTTGCATTTAGTGATGCTTTATCCA
AAGGACGTTTAAGCGCGAAACAGCGAGAGTTAATCGCTTTGGCGATAGCTCAGGTAAATCAGTGTCAGTATTGCTTATCT
GCTCATACCCTTATTGCTGGTAATACTGGATTAGCAAAACATCATATCAAGGAAGCAAGACAAGCTAAGGCTGATAACGC
GTTGGATCAAGCACTGATTACCTTAGCCGTAGATTTGGTTGAGCAGCGTGGAGAGCTCACTACAGAACAATTAGATATAG
CTAATGAAAATGGAGTTGATAGCGAGTTGATCTTTGAGGTGCTAGGCCTAGTGACGGCTAATATATTTACCAATTATGCA
AATCATTTAGCACAAACAGATATTGATTTTCCAGAAGTAAGCCTTACGGTTTGA

Upstream 100 bases:

>100_bases
TGAGACTCTGGGTATGTATATCGAGATTAATAGTGATAAATCGTATTACTGATAGTGTCAATATCAATATCGTAAATTCA
CTTAATCAAAGGAGCTCAGC

Downstream 100 bases:

>100_bases
TATTGAAAGGAGCCATTTATGCAGCAGGAAAGAGGTTATTTAGTCGGTCTAGCAGGTGTTGTACTTACGCTATTATGGAT
TGGTGTATTTAAGTTTACTC

Product: alkylhydroperoxidase

Products: NA

Alternate protein names: Alkylhydroperoxidase Like Protein AhpD Family; Alkylhydroperoxidase AhpD Core; Peroxidase-Related; Carboxymuconolactone Decarboxylase; 4-Carboxymuconolactone Decarboxylase; Alkylhydroperoxidase AhpD Family Core Domain Protein; Carboxymuconolactone Decarboxylase Family Protein; Alkylhydroperoxidase AhpD; Alkylhydroperoxidase-Like Protein AhpD Family; Alpha/Beta Hydrolase; 24 KDa Macrophage-Induced Protein; Carboxymuconolactone Decarboxylase Family; Alkylhydroperoxidase-Like Protein; Mip Protein; MIP-(Macrophage Infectivity Potentiator)-Like Protein; AhpD-Like Alkylhydroperoxidase; Macrophage Infectivity Potentiator-Related Protein; Antioxydant Protein; Peroxidase; Alkylhydroperoxidase AhpD Family Protein; Alkylhydroperoxidase AhpD Family Core Domain Protein MED; Peroxidase-Like Protein; Alkylhydroperoxidase Like Protein AhpD Family Protein

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSRILPVSNPPGDVATTLAAIKSKLGMVPNLYATIGHSSTVLNAYLAFSDALSKGRLSAKQRELIALAIAQVNQCQYCLS
AHTLIAGNTGLAKHHIKEARQAKADNALDQALITLAVDLVEQRGELTTEQLDIANENGVDSELIFEVLGLVTANIFTNYA
NHLAQTDIDFPEVSLTV

Sequences:

>Translated_177_residues
MSRILPVSNPPGDVATTLAAIKSKLGMVPNLYATIGHSSTVLNAYLAFSDALSKGRLSAKQRELIALAIAQVNQCQYCLS
AHTLIAGNTGLAKHHIKEARQAKADNALDQALITLAVDLVEQRGELTTEQLDIANENGVDSELIFEVLGLVTANIFTNYA
NHLAQTDIDFPEVSLTV
>Mature_176_residues
SRILPVSNPPGDVATTLAAIKSKLGMVPNLYATIGHSSTVLNAYLAFSDALSKGRLSAKQRELIALAIAQVNQCQYCLSA
HTLIAGNTGLAKHHIKEARQAKADNALDQALITLAVDLVEQRGELTTEQLDIANENGVDSELIFEVLGLVTANIFTNYAN
HLAQTDIDFPEVSLTV

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18939; Mature: 18808

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRILPVSNPPGDVATTLAAIKSKLGMVPNLYATIGHSSTVLNAYLAFSDALSKGRLSAK
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
QRELIALAIAQVNQCQYCLSAHTLIAGNTGLAKHHIKEARQAKADNALDQALITLAVDLV
HHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQRGELTTEQLDIANENGVDSELIFEVLGLVTANIFTNYANHLAQTDIDFPEVSLTV
HHCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
>Mature Secondary Structure 
SRILPVSNPPGDVATTLAAIKSKLGMVPNLYATIGHSSTVLNAYLAFSDALSKGRLSAK
CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
QRELIALAIAQVNQCQYCLSAHTLIAGNTGLAKHHIKEARQAKADNALDQALITLAVDLV
HHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQRGELTTEQLDIANENGVDSELIFEVLGLVTANIFTNYANHLAQTDIDFPEVSLTV
HHCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA