Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
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Accession | NC_009901 |
Length | 5,174,581 |
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The map label for this gene is 157961081
Identifier: 157961081
GI number: 157961081
Start: 1525654
End: 1527147
Strand: Direct
Name: 157961081
Synonym: Spea_1253
Alternate gene names: NA
Gene position: 1525654-1527147 (Clockwise)
Preceding gene: 157961079
Following gene: 157961082
Centisome position: 29.48
GC content: 35.14
Gene sequence:
>1494_bases ATGTGCTATTTATATAGATTGTTGATACTAGTTGCATGGATGTGGTTGAGTATGAAGTTACTGAGAAGCATGACTGGAGC ATCGCCCGAAGCTAGGATGATCTTATTGCTATGGATAGCAATGAGGCGAGAGCTTTACGTGGCCTTGCCTTCAGAATATG CCAAGTATCTTGGTGTGAGTAAAAGAAGCCTAATGAAGGCCATTGATTACTTGCTATCAGAAGGATACATAGAAGAAGTG CCTGGCCTATCAAGGCGAAAGGGACGAAGGGGAGGAAGTGGATATGATATTTCTTATACATCATTACAGTGGTTCGAGGA ATCAAGAGCTGAGATATTCTTGAAGGATTATTTTGATAGTGCTTTATATTTGAATATGAATGGGAATAGTCAAAAGTTAA CCTTAGAGTCTCAGGTTTTACTTTTAGTACTAATATTTTTATCCGATCATTTTTCAAGAATTTACAATGTTGATTATGAG TATGTTAGTCAATTAACAGGGCTTAAGGTTAAAGTTATAAAGGACAATCTATCCACCCTTGTTAAACCATTAGTTGTTGG TTTTAATCCTAATGGACGTTTTTCGGTTGTTGAGCCAATATACAAACTAATTAAGCCTCCATGTTTCAATAGGAGATTCA ATTTTGAACCTTCGCTCTTAGGTTGTAACTATGAAAGTAGCTATTTTAACTTTAAGTTGGTGGTAAAGAACTTGTCAGCT ATTTATGATTGTTTAACAAAAGAACGGGTGGGGACAGTTTCATTAGAAAGGCACCGAGAATATGCTTTTAGAAAAATCAT GAATATAAATGATCGATATCTTCATAGTGACTTTGTAGGTTTTTTTCATTGTTGCTCTAAAATTGGGAGTTTTATTTACA ATGATGAAAAGCTTATGGAACACATTACTATTTGTCATAATATTTGTATAGAAAGGCATGCTTTATTAGAACTAACTGAT GAGCAGTTTACGAGGAATATTGTATCATTTCTTAAGAGTATATTTCCTTATGACGGAAGGGATGACTTTAAACTAGATAT GCTTAACAAAGAAGTCAGTATCTATGATGTGCATAAAAATAAGGTTGGATTTTTAAAACAATACAAAGACGTTAATAGCT TATCAAATATGGGGCTTTTTTATCATTTGTGGGCAGAGTCCATTCTGCCGTTTATCAAGAGTCTTTCGTCTCAATTAAGA GTGCTGTCTGAATCAAAGTCTTTGAAGGTGGAGGCTATAAGGTGTTTGCCTAAATCCAAAGCAATCATTACCCAAAAACT AGTTGTCGAGAGCGATGTGACAGTGGTGGAAAATGTTATAGAGGAAAAAGGATTTATGCAGCACTTAGCTGTTAATGGTG TTGTTGAGTTTTTTTGTGGCAACACAGGCTCAACTAAAGGCAAGTATTGTGTCTTCGGGAGGGATGTCTATGAAAATAAC TCCAGAGTAATTATTGGTGAGCAGGAGTATGAGATTGCTATTAAATATAACTAA
Upstream 100 bases:
>100_bases TATTATCCATGTTGGTAGCCATTTGGTTAATTCAACTAGTTGAAGAACTAGTTGATACTACATCAGGTTTAATGACTATG ACTAGGTTTTTGGCGGCTTA
Downstream 100 bases:
>100_bases CAACGATTTTATGTGCAGGGATCGCTTAGGCTAGTATGAGCTGGTATGTTTCGGTAATAGTATTATATACATAGCTCTTA AGTTATTACGTGTTGAGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MCYLYRLLILVAWMWLSMKLLRSMTGASPEARMILLLWIAMRRELYVALPSEYAKYLGVSKRSLMKAIDYLLSEGYIEEV PGLSRRKGRRGGSGYDISYTSLQWFEESRAEIFLKDYFDSALYLNMNGNSQKLTLESQVLLLVLIFLSDHFSRIYNVDYE YVSQLTGLKVKVIKDNLSTLVKPLVVGFNPNGRFSVVEPIYKLIKPPCFNRRFNFEPSLLGCNYESSYFNFKLVVKNLSA IYDCLTKERVGTVSLERHREYAFRKIMNINDRYLHSDFVGFFHCCSKIGSFIYNDEKLMEHITICHNICIERHALLELTD EQFTRNIVSFLKSIFPYDGRDDFKLDMLNKEVSIYDVHKNKVGFLKQYKDVNSLSNMGLFYHLWAESILPFIKSLSSQLR VLSESKSLKVEAIRCLPKSKAIITQKLVVESDVTVVENVIEEKGFMQHLAVNGVVEFFCGNTGSTKGKYCVFGRDVYENN SRVIIGEQEYEIAIKYN
Sequences:
>Translated_497_residues MCYLYRLLILVAWMWLSMKLLRSMTGASPEARMILLLWIAMRRELYVALPSEYAKYLGVSKRSLMKAIDYLLSEGYIEEV PGLSRRKGRRGGSGYDISYTSLQWFEESRAEIFLKDYFDSALYLNMNGNSQKLTLESQVLLLVLIFLSDHFSRIYNVDYE YVSQLTGLKVKVIKDNLSTLVKPLVVGFNPNGRFSVVEPIYKLIKPPCFNRRFNFEPSLLGCNYESSYFNFKLVVKNLSA IYDCLTKERVGTVSLERHREYAFRKIMNINDRYLHSDFVGFFHCCSKIGSFIYNDEKLMEHITICHNICIERHALLELTD EQFTRNIVSFLKSIFPYDGRDDFKLDMLNKEVSIYDVHKNKVGFLKQYKDVNSLSNMGLFYHLWAESILPFIKSLSSQLR VLSESKSLKVEAIRCLPKSKAIITQKLVVESDVTVVENVIEEKGFMQHLAVNGVVEFFCGNTGSTKGKYCVFGRDVYENN SRVIIGEQEYEIAIKYN >Mature_497_residues MCYLYRLLILVAWMWLSMKLLRSMTGASPEARMILLLWIAMRRELYVALPSEYAKYLGVSKRSLMKAIDYLLSEGYIEEV PGLSRRKGRRGGSGYDISYTSLQWFEESRAEIFLKDYFDSALYLNMNGNSQKLTLESQVLLLVLIFLSDHFSRIYNVDYE YVSQLTGLKVKVIKDNLSTLVKPLVVGFNPNGRFSVVEPIYKLIKPPCFNRRFNFEPSLLGCNYESSYFNFKLVVKNLSA IYDCLTKERVGTVSLERHREYAFRKIMNINDRYLHSDFVGFFHCCSKIGSFIYNDEKLMEHITICHNICIERHALLELTD EQFTRNIVSFLKSIFPYDGRDDFKLDMLNKEVSIYDVHKNKVGFLKQYKDVNSLSNMGLFYHLWAESILPFIKSLSSQLR VLSESKSLKVEAIRCLPKSKAIITQKLVVESDVTVVENVIEEKGFMQHLAVNGVVEFFCGNTGSTKGKYCVFGRDVYENN SRVIIGEQEYEIAIKYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57636; Mature: 57636
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCYLYRLLILVAWMWLSMKLLRSMTGASPEARMILLLWIAMRRELYVALPSEYAKYLGVS CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCHHHHHHHCCC KRSLMKAIDYLLSEGYIEEVPGLSRRKGRRGGSGYDISYTSLQWFEESRAEIFLKDYFDS HHHHHHHHHHHHCCCCHHHCCCCHHHCCCCCCCCCCEEEHHHHHHHHHHHHEEHHHHCCC ALYLNMNGNSQKLTLESQVLLLVLIFLSDHFSRIYNVDYEYVSQLTGLKVKVIKDNLSTL EEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEHHHHHHH VKPLVVGFNPNGRFSVVEPIYKLIKPPCFNRRFNFEPSLLGCNYESSYFNFKLVVKNLSA HHHHEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCEEHHHHHHHHHH IYDCLTKERVGTVSLERHREYAFRKIMNINDRYLHSDFVGFFHCCSKIGSFIYNDEKLME HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH HITICHNICIERHALLELTDEQFTRNIVSFLKSIFPYDGRDDFKLDMLNKEVSIYDVHKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCC KVGFLKQYKDVNSLSNMGLFYHLWAESILPFIKSLSSQLRVLSESKSLKVEAIRCLPKSK CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCH AIITQKLVVESDVTVVENVIEEKGFMQHLAVNGVVEFFCGNTGSTKGKYCVFGRDVYENN HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEECC SRVIIGEQEYEIAIKYN CEEEEECCCEEEEEEEC >Mature Secondary Structure MCYLYRLLILVAWMWLSMKLLRSMTGASPEARMILLLWIAMRRELYVALPSEYAKYLGVS CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCHHHHHHHCCC KRSLMKAIDYLLSEGYIEEVPGLSRRKGRRGGSGYDISYTSLQWFEESRAEIFLKDYFDS HHHHHHHHHHHHCCCCHHHCCCCHHHCCCCCCCCCCEEEHHHHHHHHHHHHEEHHHHCCC ALYLNMNGNSQKLTLESQVLLLVLIFLSDHFSRIYNVDYEYVSQLTGLKVKVIKDNLSTL EEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEHHHHHHH VKPLVVGFNPNGRFSVVEPIYKLIKPPCFNRRFNFEPSLLGCNYESSYFNFKLVVKNLSA HHHHEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCEEHHHHHHHHHH IYDCLTKERVGTVSLERHREYAFRKIMNINDRYLHSDFVGFFHCCSKIGSFIYNDEKLME HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH HITICHNICIERHALLELTDEQFTRNIVSFLKSIFPYDGRDDFKLDMLNKEVSIYDVHKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCC KVGFLKQYKDVNSLSNMGLFYHLWAESILPFIKSLSSQLRVLSESKSLKVEAIRCLPKSK CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCH AIITQKLVVESDVTVVENVIEEKGFMQHLAVNGVVEFFCGNTGSTKGKYCVFGRDVYENN HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEECC SRVIIGEQEYEIAIKYN CEEEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA