| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yggN [C]
Identifier: 157960940
GI number: 157960940
Start: 1346968
End: 1347783
Strand: Direct
Name: yggN [C]
Synonym: Spea_1112
Alternate gene names: 157960940
Gene position: 1346968-1347783 (Clockwise)
Preceding gene: 157960939
Following gene: 157960941
Centisome position: 26.03
GC content: 44.24
Gene sequence:
>816_bases ATGAAAAAATTACTTACCTCAGTTGGGATCTCTGCAGTGTTGCTTTCGGCAACTAGCCTACAAATAGTTTCTGCTCATAG CGACCATGATATGACCAATGAGTGTGAAGTCTCATTGAATTACGATGTTACCGTAGAGCCTAAGAAGCTTATCGTGAGCG AGGTTGGTGACGAGAAGTACCGCATTGAAATGGATAAGCTGTTTGTTAATGGCAAGCAAGTTTCACTCAATAGTGAACAG CAAGCATTAATTAGCCAGTATTCGCAAGAGGTTTCAACGCAGGTTCCAGAAGTCATAGCACTGGTTAATGATGCCGTAGA GATGGCATCAACGGCAGTGAGCTTAGCCTTGACGCCACTATTAGGTGATAGCGCCGGCGCTAAAATTGACGAGATGATGG CAGGTCTTGAGGAGCGTATCGAGACTGTGGCTTACCAGAATGGCGATAAGTTTTACTTAGGTTCGACCGAGTCTTCTTTA GAAGATGCTTTTGGCGAAGAGTTTGAGCAAGAGATGGAAGAGTTAGTACAAAACTCTCTAGGCAGCATGATGATGACTCT GGGTGCACAGATGATGTCTGGTGACGGTGATAGCTTCGAACAGAAGATGGACTCATTCTCACATAAAATGGATTCAATCG GCGAAGAAATAGAGCTGCAGATGGATCAACAAGCCGAAGATTTAGAAGCGCGTGGCGAGAAACTATGTGAAAGATTTAAA ACCTTAGTGGTGCTAGAGCAGCAATTGCGCAGTGAAATTCCTGAGCTTGCTAATTATCCCCTAGTTGAAACAGCAAACAC GACTTTGCAGGAGTAA
Upstream 100 bases:
>100_bases CTTAATTCTTTTAAAACAGTAGCTTGTGTGTTTTGGCATAGTCTGTGCTTTATCTCAGTCAATATAAAGATTTAGATAAT AGCGATAAAGGATTGAAGCG
Downstream 100 bases:
>100_bases ATACAGTTTCACTGGACTCTTTGGCTGATCAAACATAATCAGTACTTCTGTTGCTTCTGACTGTCTTGCAACCCCCCTGC ATCCCACCTTTATGCAGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKKLLTSVGISAVLLSATSLQIVSAHSDHDMTNECEVSLNYDVTVEPKKLIVSEVGDEKYRIEMDKLFVNGKQVSLNSEQ QALISQYSQEVSTQVPEVIALVNDAVEMASTAVSLALTPLLGDSAGAKIDEMMAGLEERIETVAYQNGDKFYLGSTESSL EDAFGEEFEQEMEELVQNSLGSMMMTLGAQMMSGDGDSFEQKMDSFSHKMDSIGEEIELQMDQQAEDLEARGEKLCERFK TLVVLEQQLRSEIPELANYPLVETANTTLQE
Sequences:
>Translated_271_residues MKKLLTSVGISAVLLSATSLQIVSAHSDHDMTNECEVSLNYDVTVEPKKLIVSEVGDEKYRIEMDKLFVNGKQVSLNSEQ QALISQYSQEVSTQVPEVIALVNDAVEMASTAVSLALTPLLGDSAGAKIDEMMAGLEERIETVAYQNGDKFYLGSTESSL EDAFGEEFEQEMEELVQNSLGSMMMTLGAQMMSGDGDSFEQKMDSFSHKMDSIGEEIELQMDQQAEDLEARGEKLCERFK TLVVLEQQLRSEIPELANYPLVETANTTLQE >Mature_271_residues MKKLLTSVGISAVLLSATSLQIVSAHSDHDMTNECEVSLNYDVTVEPKKLIVSEVGDEKYRIEMDKLFVNGKQVSLNSEQ QALISQYSQEVSTQVPEVIALVNDAVEMASTAVSLALTPLLGDSAGAKIDEMMAGLEERIETVAYQNGDKFYLGSTESSL EDAFGEEFEQEMEELVQNSLGSMMMTLGAQMMSGDGDSFEQKMDSFSHKMDSIGEEIELQMDQQAEDLEARGEKLCERFK TLVVLEQQLRSEIPELANYPLVETANTTLQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29934; Mature: 29934
Theoretical pI: Translated: 3.89; Mature: 3.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLTSVGISAVLLSATSLQIVSAHSDHDMTNECEVSLNYDVTVEPKKLIVSEVGDEKY CHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEECCCEEECHHHHHHHHCCCCHH RIEMDKLFVNGKQVSLNSEQQALISQYSQEVSTQVPEVIALVNDAVEMASTAVSLALTPL EEEHHHHEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGDSAGAKIDEMMAGLEERIETVAYQNGDKFYLGSTESSLEDAFGEEFEQEMEELVQNSL HCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH GSMMMTLGAQMMSGDGDSFEQKMDSFSHKMDSIGEEIELQMDQQAEDLEARGEKLCERFK HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHH TLVVLEQQLRSEIPELANYPLVETANTTLQE HHHHHHHHHHHHHHHHHCCCCEECCCHHCCC >Mature Secondary Structure MKKLLTSVGISAVLLSATSLQIVSAHSDHDMTNECEVSLNYDVTVEPKKLIVSEVGDEKY CHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEECCCEEECHHHHHHHHCCCCHH RIEMDKLFVNGKQVSLNSEQQALISQYSQEVSTQVPEVIALVNDAVEMASTAVSLALTPL EEEHHHHEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGDSAGAKIDEMMAGLEERIETVAYQNGDKFYLGSTESSLEDAFGEEFEQEMEELVQNSL HCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH GSMMMTLGAQMMSGDGDSFEQKMDSFSHKMDSIGEEIELQMDQQAEDLEARGEKLCERFK HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHH TLVVLEQQLRSEIPELANYPLVETANTTLQE HHHHHHHHHHHHHHHHHCCCCEECCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA