| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is glsA [H]
Identifier: 157960939
GI number: 157960939
Start: 1345820
End: 1346734
Strand: Direct
Name: glsA [H]
Synonym: Spea_1111
Alternate gene names: 157960939
Gene position: 1345820-1346734 (Clockwise)
Preceding gene: 157960938
Following gene: 157960940
Centisome position: 26.01
GC content: 46.12
Gene sequence:
>915_bases ATGCCTGAATTGGCATTACTTGAAGAGGTCATCGAAAAAGTTCGGCCTCTTCTAGGACAGGGGAAAGTAGCTGATTATAT TCCAGCGCTTGCCCAAGTCGATGCTAATAAGCTAGGTATTGCGGTGACAACCTCTGACGGTGTCACAATAGGGGCTGGAG ATTATCTCGAGCCCTTTTCAATTCAGAGTATCTCTAAGGTATTTAGTCTTACCTTAGCGCTGATGTTGTATGAAGAAGAT GAAATTTGGTCGAGAGTAGGTAAAGAACCCTCAGGCCATTCTTTTAACTCTTTAGTACAGGTTGAATTGGAAAAAGGCTT ACCTCGAAATCCATTTATCAACGCTGGCGCGCTGGTCATTGCCGACCTTTTGCAAAGTCGCCTAGGTGCTCCTAAGCACC GTATGCTTGAGATTGTTCGTCAGCTCAGTGAAAACCATCGCATAGGTTACGATAAAGTCGTTGCCGCGTCTGAGTATCAA CACAGTGCAAGAAATGCTGCGATTGCTTACTTGATGAAGTCCTTTGGTAATTTCAACAATGATGTCGATACTGTGCTGCA TAGCTATTTTCATTATTGTTCGCTGCGCATGAGCTGCGCAGATCTATCCCGTGCTATGTTTTACTTAGCAAACTCAGGTA AGAGCCTTGCTGGTAAGCAACTTATTACGCCTGTGCAAAATCGGCAGCTAAATGCCTTATTAGCCACATCTGGTCTTTAT GATGGTGCTGGTGAGTTCGCTTATCGTGTCGGTATGCCGGGTAAGAGCGGTGTCGGTGGTGGAATTATCGCGGTGATCCC TGGCGATATGTCTGTGTGCGTTTGGTCCCCAGAGCTTGATGCCAACGGCAACTCTTTAGCGGGCACTGCTGTGTTAGAGG CTTTGAGTCAGACTTTAGGTCGCTCAATTTTCTAG
Upstream 100 bases:
>100_bases AGTGTACTGAAGAAAACAGAGCCGCTGTTAAGGCGTTCTTTGATGCACAACCAGTATCAGATCTTGAAATTGGTGAGCTT TTCGATATCTGGTGGGGCTA
Downstream 100 bases:
>100_bases TATTACTGTTCGACTTTGTTATATCTGCATCGATATCAGTACCTACACCAGTTGTTTGTGATATTTGGCTAATAGTTAGT TTAATTGGCCAAATATCTTA
Product: glutaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MPELALLEEVIEKVRPLLGQGKVADYIPALAQVDANKLGIAVTTSDGVTIGAGDYLEPFSIQSISKVFSLTLALMLYEED EIWSRVGKEPSGHSFNSLVQVELEKGLPRNPFINAGALVIADLLQSRLGAPKHRMLEIVRQLSENHRIGYDKVVAASEYQ HSARNAAIAYLMKSFGNFNNDVDTVLHSYFHYCSLRMSCADLSRAMFYLANSGKSLAGKQLITPVQNRQLNALLATSGLY DGAGEFAYRVGMPGKSGVGGGIIAVIPGDMSVCVWSPELDANGNSLAGTAVLEALSQTLGRSIF
Sequences:
>Translated_304_residues MPELALLEEVIEKVRPLLGQGKVADYIPALAQVDANKLGIAVTTSDGVTIGAGDYLEPFSIQSISKVFSLTLALMLYEED EIWSRVGKEPSGHSFNSLVQVELEKGLPRNPFINAGALVIADLLQSRLGAPKHRMLEIVRQLSENHRIGYDKVVAASEYQ HSARNAAIAYLMKSFGNFNNDVDTVLHSYFHYCSLRMSCADLSRAMFYLANSGKSLAGKQLITPVQNRQLNALLATSGLY DGAGEFAYRVGMPGKSGVGGGIIAVIPGDMSVCVWSPELDANGNSLAGTAVLEALSQTLGRSIF >Mature_303_residues PELALLEEVIEKVRPLLGQGKVADYIPALAQVDANKLGIAVTTSDGVTIGAGDYLEPFSIQSISKVFSLTLALMLYEEDE IWSRVGKEPSGHSFNSLVQVELEKGLPRNPFINAGALVIADLLQSRLGAPKHRMLEIVRQLSENHRIGYDKVVAASEYQH SARNAAIAYLMKSFGNFNNDVDTVLHSYFHYCSLRMSCADLSRAMFYLANSGKSLAGKQLITPVQNRQLNALLATSGLYD GAGEFAYRVGMPGKSGVGGGIIAVIPGDMSVCVWSPELDANGNSLAGTAVLEALSQTLGRSIF
Specific function: Unknown
COG id: COG2066
COG function: function code E; Glutaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutaminase family [H]
Homologues:
Organism=Homo sapiens, GI156104878, Length=287, Percent_Identity=35.8885017421603, Blast_Score=176, Evalue=2e-44, Organism=Homo sapiens, GI20336214, Length=294, Percent_Identity=33.6734693877551, Blast_Score=162, Evalue=5e-40, Organism=Escherichia coli, GI1787804, Length=301, Percent_Identity=64.4518272425249, Blast_Score=417, Evalue=1e-118, Organism=Escherichia coli, GI1786693, Length=289, Percent_Identity=35.9861591695502, Blast_Score=169, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17532727, Length=302, Percent_Identity=33.4437086092715, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17507019, Length=294, Percent_Identity=36.3945578231293, Blast_Score=178, Evalue=4e-45, Organism=Caenorhabditis elegans, GI193204073, Length=305, Percent_Identity=33.1147540983607, Blast_Score=158, Evalue=4e-39, Organism=Caenorhabditis elegans, GI193204075, Length=307, Percent_Identity=32.8990228013029, Blast_Score=157, Evalue=8e-39, Organism=Drosophila melanogaster, GI281363241, Length=285, Percent_Identity=35.7894736842105, Blast_Score=169, Evalue=2e-42, Organism=Drosophila melanogaster, GI24653162, Length=285, Percent_Identity=35.7894736842105, Blast_Score=169, Evalue=2e-42, Organism=Drosophila melanogaster, GI24653158, Length=285, Percent_Identity=35.7894736842105, Blast_Score=169, Evalue=2e-42, Organism=Drosophila melanogaster, GI24653156, Length=285, Percent_Identity=35.7894736842105, Blast_Score=169, Evalue=2e-42, Organism=Drosophila melanogaster, GI24653164, Length=285, Percent_Identity=35.7894736842105, Blast_Score=169, Evalue=2e-42, Organism=Drosophila melanogaster, GI281363239, Length=285, Percent_Identity=35.7894736842105, Blast_Score=169, Evalue=2e-42, Organism=Drosophila melanogaster, GI24653166, Length=285, Percent_Identity=35.7894736842105, Blast_Score=169, Evalue=2e-42, Organism=Drosophila melanogaster, GI116008307, Length=285, Percent_Identity=35.7894736842105, Blast_Score=169, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR015868 [H]
Pfam domain/function: PF04960 Glutaminase [H]
EC number: =3.5.1.2 [H]
Molecular weight: Translated: 32724; Mature: 32593
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPELALLEEVIEKVRPLLGQGKVADYIPALAQVDANKLGIAVTTSDGVTIGAGDYLEPFS CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCCCCH IQSISKVFSLTLALMLYEEDEIWSRVGKEPSGHSFNSLVQVELEKGLPRNPFINAGALVI HHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHEEEEEHHCCCCCCCCCCCHHHHH ADLLQSRLGAPKHRMLEIVRQLSENHRIGYDKVVAASEYQHSARNAAIAYLMKSFGNFNN HHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DVDTVLHSYFHYCSLRMSCADLSRAMFYLANSGKSLAGKQLITPVQNRQLNALLATSGLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCHHCCCHHHHHHHHCCCC DGAGEFAYRVGMPGKSGVGGGIIAVIPGDMSVCVWSPELDANGNSLAGTAVLEALSQTLG CCCCCCEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHC RSIF CCCC >Mature Secondary Structure PELALLEEVIEKVRPLLGQGKVADYIPALAQVDANKLGIAVTTSDGVTIGAGDYLEPFS CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCCCCH IQSISKVFSLTLALMLYEEDEIWSRVGKEPSGHSFNSLVQVELEKGLPRNPFINAGALVI HHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCHHHEEEEEHHCCCCCCCCCCCHHHHH ADLLQSRLGAPKHRMLEIVRQLSENHRIGYDKVVAASEYQHSARNAAIAYLMKSFGNFNN HHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DVDTVLHSYFHYCSLRMSCADLSRAMFYLANSGKSLAGKQLITPVQNRQLNALLATSGLY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCHHCCCHHHHHHHHCCCC DGAGEFAYRVGMPGKSGVGGGIIAVIPGDMSVCVWSPELDANGNSLAGTAVLEALSQTLG CCCCCCEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHC RSIF CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA