| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960931
Identifier: 157960931
GI number: 157960931
Start: 1336417
End: 1337601
Strand: Direct
Name: 157960931
Synonym: Spea_1103
Alternate gene names: NA
Gene position: 1336417-1337601 (Clockwise)
Preceding gene: 157960930
Following gene: 157960932
Centisome position: 25.83
GC content: 44.64
Gene sequence:
>1185_bases ATGACAACAATAATAGATAAACCCCGAGTAAGTATAGCTAGTGTGGCAGCTGAATCGGTTTCTAAGCCGGCAGCAAAACC TAGACTTAAGTCATTAGATGCACTGCGTGGCTTTGATATGTTTTGGATCTTAGGTGGTGAAGCCATATTTGCAGCTTTGC TGCTATTAACAGGCTGGGCTGGTTTTAACTGGTTTGATAGCCAGATGCATCATAGTACTTGGCATGGCTTTACTTTCTAC GATCTAATTTTCCCGCTGTTTATTTTCCTCTCCGGCGTTGCACTAGGCCTGTCACCCAAGCGTTTAGACAAGCTACCATT GCCTCAGCGGATGCCGCTATACCAGCATGCAATTAAACGACTGTTACTATTACTGCTATTTGGGGTTATCTATAACCATG GCTGGGGGACGGGAGCACCATTCGCGCTGGGAGATATTCGTTATGCCAGCGTGCTAGGTAGAATTGCCTTTGCATGGTTT TTCTGCGCCTTGTTAGTGTGGCATACCAGTCTAAGAACCCAGATAGTTACTGCCATCCTTGTATTAGTCGGTTACGCCGT CCTGCAAACTTTCCCTTTTATGACGTTAGGTAATAGCGGCGCTTTTAGCCAGACAGGCTCAATTAACGCCGCTGTAGATA GCTTGTTGTTACCGGGCATAACTTATCAGAATGCAGCGGTCGACCCAGAGGGAATACTCTCGACTGTTCCTGCCGTTGTA AATGGCTTATTTGGTGTGTTTGTGGGGCACTTTATTGTAAAGCCACAGGTTAAAGGGGAGTGGTTTAAAGTCGCGATATT GGCACTGTCAGGCTTAGGTTTATTGGTATTAGGTTGGGCGGTTTCGCCATGGAATCCCGTGAATAAAACCCTGTGGACCA GTAGCTTTACCTTAGTGACTTCAGGTTGGAGCATACTTTTCTTAGCCTTGTTCTACACCATTATAGATGTTTTAAAAGTG CAGAAGTGGGCATTTTTCTTCACGGTTATTGGCTGTAACTCTATCGTTATCTACATAGCGACTAGCATAGTCAATTGGAA GTACGCCGCAACGAGTCTATTTGGTGGTGTCATTTCAAGTCTACCAAATCATGTTCAGGCACTTGGCAGCGTAACTTCTC TGTTGTTGGTGCAATGGTTAGTTTTGTACTGGATGTATAAGCGCAATATCTTCATTAAGGTTTAA
Upstream 100 bases:
>100_bases TTAACTTAAACTGAGCCTCTGTAGTAAGTAATAACTTCAAATACTGCAGAGGCTTTGCTTTATGTAGACGGCGATAAAAG CGATAACAAGGGCTGTTTAG
Downstream 100 bases:
>100_bases GTTGGTCTGTTTACAATAGGATTTGATTAAGCTCTTCGAGTCAAAGTCGTATAGTGGGAACAATTGCGCTCAATTGAGCC GTAGAAGCAATAAATGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MTTIIDKPRVSIASVAAESVSKPAAKPRLKSLDALRGFDMFWILGGEAIFAALLLLTGWAGFNWFDSQMHHSTWHGFTFY DLIFPLFIFLSGVALGLSPKRLDKLPLPQRMPLYQHAIKRLLLLLLFGVIYNHGWGTGAPFALGDIRYASVLGRIAFAWF FCALLVWHTSLRTQIVTAILVLVGYAVLQTFPFMTLGNSGAFSQTGSINAAVDSLLLPGITYQNAAVDPEGILSTVPAVV NGLFGVFVGHFIVKPQVKGEWFKVAILALSGLGLLVLGWAVSPWNPVNKTLWTSSFTLVTSGWSILFLALFYTIIDVLKV QKWAFFFTVIGCNSIVIYIATSIVNWKYAATSLFGGVISSLPNHVQALGSVTSLLLVQWLVLYWMYKRNIFIKV
Sequences:
>Translated_394_residues MTTIIDKPRVSIASVAAESVSKPAAKPRLKSLDALRGFDMFWILGGEAIFAALLLLTGWAGFNWFDSQMHHSTWHGFTFY DLIFPLFIFLSGVALGLSPKRLDKLPLPQRMPLYQHAIKRLLLLLLFGVIYNHGWGTGAPFALGDIRYASVLGRIAFAWF FCALLVWHTSLRTQIVTAILVLVGYAVLQTFPFMTLGNSGAFSQTGSINAAVDSLLLPGITYQNAAVDPEGILSTVPAVV NGLFGVFVGHFIVKPQVKGEWFKVAILALSGLGLLVLGWAVSPWNPVNKTLWTSSFTLVTSGWSILFLALFYTIIDVLKV QKWAFFFTVIGCNSIVIYIATSIVNWKYAATSLFGGVISSLPNHVQALGSVTSLLLVQWLVLYWMYKRNIFIKV >Mature_393_residues TTIIDKPRVSIASVAAESVSKPAAKPRLKSLDALRGFDMFWILGGEAIFAALLLLTGWAGFNWFDSQMHHSTWHGFTFYD LIFPLFIFLSGVALGLSPKRLDKLPLPQRMPLYQHAIKRLLLLLLFGVIYNHGWGTGAPFALGDIRYASVLGRIAFAWFF CALLVWHTSLRTQIVTAILVLVGYAVLQTFPFMTLGNSGAFSQTGSINAAVDSLLLPGITYQNAAVDPEGILSTVPAVVN GLFGVFVGHFIVKPQVKGEWFKVAILALSGLGLLVLGWAVSPWNPVNKTLWTSSFTLVTSGWSILFLALFYTIIDVLKVQ KWAFFFTVIGCNSIVIYIATSIVNWKYAATSLFGGVISSLPNHVQALGSVTSLLLVQWLVLYWMYKRNIFIKV
Specific function: Unknown
COG id: COG4299
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI150378452, Length=420, Percent_Identity=24.047619047619, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI24639786, Length=393, Percent_Identity=25.9541984732824, Blast_Score=89, Evalue=8e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43473; Mature: 43342
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIIDKPRVSIASVAAESVSKPAAKPRLKSLDALRGFDMFWILGGEAIFAALLLLTGWA CCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCC GFNWFDSQMHHSTWHGFTFYDLIFPLFIFLSGVALGLSPKRLDKLPLPQRMPLYQHAIKR CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHH LLLLLLFGVIYNHGWGTGAPFALGDIRYASVLGRIAFAWFFCALLVWHTSLRTQIVTAIL HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLVGYAVLQTFPFMTLGNSGAFSQTGSINAAVDSLLLPGITYQNAAVDPEGILSTVPAVV HHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH NGLFGVFVGHFIVKPQVKGEWFKVAILALSGLGLLVLGWAVSPWNPVNKTLWTSSFTLVT HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHCCCHHEEC SGWSILFLALFYTIIDVLKVQKWAFFFTVIGCNSIVIYIATSIVNWKYAATSLFGGVISS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LPNHVQALGSVTSLLLVQWLVLYWMYKRNIFIKV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC >Mature Secondary Structure TTIIDKPRVSIASVAAESVSKPAAKPRLKSLDALRGFDMFWILGGEAIFAALLLLTGWA CCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCC GFNWFDSQMHHSTWHGFTFYDLIFPLFIFLSGVALGLSPKRLDKLPLPQRMPLYQHAIKR CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHH LLLLLLFGVIYNHGWGTGAPFALGDIRYASVLGRIAFAWFFCALLVWHTSLRTQIVTAIL HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLVGYAVLQTFPFMTLGNSGAFSQTGSINAAVDSLLLPGITYQNAAVDPEGILSTVPAVV HHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH NGLFGVFVGHFIVKPQVKGEWFKVAILALSGLGLLVLGWAVSPWNPVNKTLWTSSFTLVT HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHCCCHHEEC SGWSILFLALFYTIIDVLKVQKWAFFFTVIGCNSIVIYIATSIVNWKYAATSLFGGVISS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LPNHVQALGSVTSLLLVQWLVLYWMYKRNIFIKV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA