| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is gluP [H]
Identifier: 157960932
GI number: 157960932
Start: 1337892
End: 1339205
Strand: Direct
Name: gluP [H]
Synonym: Spea_1104
Alternate gene names: 157960932
Gene position: 1337892-1339205 (Clockwise)
Preceding gene: 157960931
Following gene: 157960933
Centisome position: 25.86
GC content: 44.52
Gene sequence:
>1314_bases ATGACAGCAACGACTCAGGCTCAAGCTAGCCCCAAGAGCAGTTTACTGCCTATGACCATAATTGGTGTGTTATTTTTCAT CTTCGGATTTGTGACTTGGCTTAACGGCTCGCTGATCCCTTTCCTTAAAATTATTTGTGAGCTAAACGAATTCCAAGCCT TATTTGTGACGTTTGCTTTCTATATTGCCTATACGGTGATGGCGCTGCCGATGTCATCGATATTAAAGAAAACCGGCTAT AAGAATGGCATGGCAATTGGCCTAGCTATTATGGTGGTTGGTTCTTTGCTATTTATTCCTGCGGCACAAAGCGCAAATTA TACTCTGTTCTTAGGAGCCTTGTTTGTTCTCGGTACCGGTCTAACCATTCTACAAACCGCATCTAATCCTTATGTTGTGC ATATTGGCCCTAAAGAAAGCGCCGCGATGCGCATTAGTATCATGGGGCTTATTAATAAAGGTGCAGGCGTCATCGTACCT ATCTTATTTACTGCATTGGTACTTTCAGGTTTTGAAAACTTTACAGCAGATCATCTAGCTGCATTAAGTGAAGCTGAGCG ATTAGCACAAATTAGTGAATTGTCTTCAAGACTGGTTATGCCATATATCTATATGGCTGTCGCGCTGACTTTCCTCATTG GTTTAGTTAAGTTTTCATCGCTTCCAGAATTAGAGTTTGAAGCAGCTGAAGATCATCAGGAAAAGGGCAGCATTACCCAT TTCCCGCAGGTAGTTCTTGGCGCCGTAGCCCTGTTTGCCTATGTTGGCGTCGAGGTTATTGCTGGCGACACTATTGGTTT GTATGGCGAAAGCTTAGGTGTTCATAACTTTGCGTCGCTGACCTCTTATACCATGGTGTTTATGGTATTTGGCTACATTA TCGGCGTGACCTGTATTCCTAAGTTTATCAGCCAAGAGAAGGCGCTACTTGGCTCGGCGATAGCAGGTATTGCATGTATC ATTGGCGCAGCCTTAGGTTCGCGTGAAAGCACTATGATTGCCGATGTGCTTTGGGGTTGGAGTGGTATTCCTGTGATCCC AGACACAGTGACTTTTGTGGCTATGATGGGCCTCGCTCATGCACTTGTATGGCCATCAATCTGGCCATTAGCATTAGAAG GGTTAGGTAAGTATACGGCTCAAGGTTCTGCATTGCTTATTATGGGGATCTCGGGGGGCGCAATCTTACCTCTGGTATTT GGTAAGGTGGCATACTTTGCAGACAATACTCAGGTAGCTTATTGGGTTGGCCTACCTTGTTATCTATTCATCTTATTCTA CGCCCTAAAAGGCCATAAGATGCGTAGCTGGTAA
Upstream 100 bases:
>100_bases AGGCAGTCGTCTGCATAAGTTAACTGGTAACAATGAAGGATGGGGTAGCAGTTTAATCTGGTATCATAAAATTAATTACT ATAAGAAGCAGGTTTAATAC
Downstream 100 bases:
>100_bases CAATCGGTTATGAAGCTCCTGCCAAGCAAGAGCCGTTATAAAGGAGCCTAAGGGCTCCTTTTTTGTTTTAGAATTTAAAG CGGAAAAATCTAAGACGGTA
Product: glucose/galactose transporter
Products: Proton [Cytoplasm]; L-fucose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MTATTQAQASPKSSLLPMTIIGVLFFIFGFVTWLNGSLIPFLKIICELNEFQALFVTFAFYIAYTVMALPMSSILKKTGY KNGMAIGLAIMVVGSLLFIPAAQSANYTLFLGALFVLGTGLTILQTASNPYVVHIGPKESAAMRISIMGLINKGAGVIVP ILFTALVLSGFENFTADHLAALSEAERLAQISELSSRLVMPYIYMAVALTFLIGLVKFSSLPELEFEAAEDHQEKGSITH FPQVVLGAVALFAYVGVEVIAGDTIGLYGESLGVHNFASLTSYTMVFMVFGYIIGVTCIPKFISQEKALLGSAIAGIACI IGAALGSRESTMIADVLWGWSGIPVIPDTVTFVAMMGLAHALVWPSIWPLALEGLGKYTAQGSALLIMGISGGAILPLVF GKVAYFADNTQVAYWVGLPCYLFILFYALKGHKMRSW
Sequences:
>Translated_437_residues MTATTQAQASPKSSLLPMTIIGVLFFIFGFVTWLNGSLIPFLKIICELNEFQALFVTFAFYIAYTVMALPMSSILKKTGY KNGMAIGLAIMVVGSLLFIPAAQSANYTLFLGALFVLGTGLTILQTASNPYVVHIGPKESAAMRISIMGLINKGAGVIVP ILFTALVLSGFENFTADHLAALSEAERLAQISELSSRLVMPYIYMAVALTFLIGLVKFSSLPELEFEAAEDHQEKGSITH FPQVVLGAVALFAYVGVEVIAGDTIGLYGESLGVHNFASLTSYTMVFMVFGYIIGVTCIPKFISQEKALLGSAIAGIACI IGAALGSRESTMIADVLWGWSGIPVIPDTVTFVAMMGLAHALVWPSIWPLALEGLGKYTAQGSALLIMGISGGAILPLVF GKVAYFADNTQVAYWVGLPCYLFILFYALKGHKMRSW >Mature_436_residues TATTQAQASPKSSLLPMTIIGVLFFIFGFVTWLNGSLIPFLKIICELNEFQALFVTFAFYIAYTVMALPMSSILKKTGYK NGMAIGLAIMVVGSLLFIPAAQSANYTLFLGALFVLGTGLTILQTASNPYVVHIGPKESAAMRISIMGLINKGAGVIVPI LFTALVLSGFENFTADHLAALSEAERLAQISELSSRLVMPYIYMAVALTFLIGLVKFSSLPELEFEAAEDHQEKGSITHF PQVVLGAVALFAYVGVEVIAGDTIGLYGESLGVHNFASLTSYTMVFMVFGYIIGVTCIPKFISQEKALLGSAIAGIACII GAALGSRESTMIADVLWGWSGIPVIPDTVTFVAMMGLAHALVWPSIWPLALEGLGKYTAQGSALLIMGISGGAILPLVFG KVAYFADNTQVAYWVGLPCYLFILFYALKGHKMRSW
Specific function: Intake of glucose and galactose (Potential) [H]
COG id: COG0738
COG function: function code G; Fucose permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. FHS transporter (TC 2.A.1.7) family [H]
Homologues:
Organism=Escherichia coli, GI1789166, Length=450, Percent_Identity=28.2222222222222, Blast_Score=142, Evalue=5e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005964 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46818; Mature: 46687
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATTQAQASPKSSLLPMTIIGVLFFIFGFVTWLNGSLIPFLKIICELNEFQALFVTFAF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH YIAYTVMALPMSSILKKTGYKNGMAIGLAIMVVGSLLFIPAAQSANYTLFLGALFVLGTG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC LTILQTASNPYVVHIGPKESAAMRISIMGLINKGAGVIVPILFTALVLSGFENFTADHLA CCEEEECCCCEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCHHHCCHHHHH ALSEAERLAQISELSSRLVMPYIYMAVALTFLIGLVKFSSLPELEFEAAEDHQEKGSITH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCH FPQVVLGAVALFAYVGVEVIAGDTIGLYGESLGVHNFASLTSYTMVFMVFGYIIGVTCIP HHHHHHHHHHHHHHHHHHHEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KFISQEKALLGSAIAGIACIIGAALGSRESTMIADVLWGWSGIPVIPDTVTFVAMMGLAH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH ALVWPSIWPLALEGLGKYTAQGSALLIMGISGGAILPLVFGKVAYFADNTQVAYWVGLPC HHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHEECCCEEEEEECHHH YLFILFYALKGHKMRSW HHHHHHHHHCCCCCCCC >Mature Secondary Structure TATTQAQASPKSSLLPMTIIGVLFFIFGFVTWLNGSLIPFLKIICELNEFQALFVTFAF CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH YIAYTVMALPMSSILKKTGYKNGMAIGLAIMVVGSLLFIPAAQSANYTLFLGALFVLGTG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC LTILQTASNPYVVHIGPKESAAMRISIMGLINKGAGVIVPILFTALVLSGFENFTADHLA CCEEEECCCCEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCHHHCCHHHHH ALSEAERLAQISELSSRLVMPYIYMAVALTFLIGLVKFSSLPELEFEAAEDHQEKGSITH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCH FPQVVLGAVALFAYVGVEVIAGDTIGLYGESLGVHNFASLTSYTMVFMVFGYIIGVTCIP HHHHHHHHHHHHHHHHHHHEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KFISQEKALLGSAIAGIACIIGAALGSRESTMIADVLWGWSGIPVIPDTVTFVAMMGLAH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH ALVWPSIWPLALEGLGKYTAQGSALLIMGISGGAILPLVFGKVAYFADNTQVAYWVGLPC HHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHEECCCEEEEEECHHH YLFILFYALKGHKMRSW HHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-fucose [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-fucose [Periplasm] = Proton [Cytoplasm] + L-fucose [Cytoplasm] [C]
General reaction: Permease [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9168605 [H]