Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is thrB [H]

Identifier: 157960895

GI number: 157960895

Start: 1291627

End: 1292562

Strand: Direct

Name: thrB [H]

Synonym: Spea_1067

Alternate gene names: 157960895

Gene position: 1291627-1292562 (Clockwise)

Preceding gene: 157960894

Following gene: 157960896

Centisome position: 24.96

GC content: 47.22

Gene sequence:

>936_bases
ATGAGCGTAACCATTTATGCTCCAGCATCTATGGGCAATGTCGGAGTCGGTTTCGATCTGCTTGGTGCCGCTTTGGCACC
AATAGATGGCAGCCTACTGGGCGATACCGTCAAAGTTGAATCTGCCGAGCAGGGGCTTTCACTCGTTCTTGCTGGCCACT
GGGCAGGCAAGCTGCCGCAAGATGAGCGAGACAATATTGTTTATCAATGTGCAGAGTTTTTCTTAAGTCATTTAGATAAA
GATGTAGGCCTTAAGTTGACCCTAGAGAAGAACTTACCTGTAGGCAGTGGGCTAGGTTCTAGCGCGAGTTCAGTGGTTGC
GGCTTTAGCGGCCCTGAACGACTTCTTCGATAAACCTTTCTCTGAGCAAGATTTACTGCGTTTAATGGGTGAGTTTGAAG
GCAAGATCAGTGGTTCAATCCATTATGACAATGTCGCGCCTTGTTACTTAGGTGGTATGCAGCTGATGCTAGATACTCCT
AAAACAGTTTGTGAAGCGATCCCTGACTTTAAACAATGGTATTGGGTGGTGGCCTATCCAGGGATCTCGCTATCGACTTC
TAGAATGCGTCAGTTGATGCCAAGCGAGTTTGATAAGCAGACCACGATTGATTTTGGCCGTTATCTCAGTGCGTTTGTGC
ATGCTTCATATAAGCAAGATGCTGAGCTAGCGATTTCAGTATTGAAGGATGTATTGGCCGAGCCTTATCGCGCGCCGGAA
ATTCCCAATTATCAAAAGGCAAAGTCTGCTTTAGCCGAATTGGGCATGTTAACCACAGGGATCTCTGGCAGCGGACCGAC
GCTGTTTAGTATTACCGATGATCTCGATGTGGCCAAACAAGCGCAGCAATGGCTAGATGCGAACTATGTTGAGCCCGGTA
AAGGCTTCTCTCATATATGCAGAATTGATAATCAAGGGACTCGTCGAGTCGATTAA

Upstream 100 bases:

>100_bases
CATTTGTGCTTAGAGGTTATGGCGCCGGTACCGATGTGACAGCTGCTGGTGCATTTGCCGATATATTACGTACTTTAAAT
TGGACTCGTGAGGTGGGCGT

Downstream 100 bases:

>100_bases
ACGTCTTAACTAGACCTAATAACAGAATTTAAGGAAGTCGTCATGGAGCTGTATAACCTAAAACACCCATCACAGGTGGT
GAGTTTTACCCAAGCGGTCA

Product: homoserine kinase

Products: NA

Alternate protein names: HK; HSK [H]

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MSVTIYAPASMGNVGVGFDLLGAALAPIDGSLLGDTVKVESAEQGLSLVLAGHWAGKLPQDERDNIVYQCAEFFLSHLDK
DVGLKLTLEKNLPVGSGLGSSASSVVAALAALNDFFDKPFSEQDLLRLMGEFEGKISGSIHYDNVAPCYLGGMQLMLDTP
KTVCEAIPDFKQWYWVVAYPGISLSTSRMRQLMPSEFDKQTTIDFGRYLSAFVHASYKQDAELAISVLKDVLAEPYRAPE
IPNYQKAKSALAELGMLTTGISGSGPTLFSITDDLDVAKQAQQWLDANYVEPGKGFSHICRIDNQGTRRVD

Sequences:

>Translated_311_residues
MSVTIYAPASMGNVGVGFDLLGAALAPIDGSLLGDTVKVESAEQGLSLVLAGHWAGKLPQDERDNIVYQCAEFFLSHLDK
DVGLKLTLEKNLPVGSGLGSSASSVVAALAALNDFFDKPFSEQDLLRLMGEFEGKISGSIHYDNVAPCYLGGMQLMLDTP
KTVCEAIPDFKQWYWVVAYPGISLSTSRMRQLMPSEFDKQTTIDFGRYLSAFVHASYKQDAELAISVLKDVLAEPYRAPE
IPNYQKAKSALAELGMLTTGISGSGPTLFSITDDLDVAKQAQQWLDANYVEPGKGFSHICRIDNQGTRRVD
>Mature_310_residues
SVTIYAPASMGNVGVGFDLLGAALAPIDGSLLGDTVKVESAEQGLSLVLAGHWAGKLPQDERDNIVYQCAEFFLSHLDKD
VGLKLTLEKNLPVGSGLGSSASSVVAALAALNDFFDKPFSEQDLLRLMGEFEGKISGSIHYDNVAPCYLGGMQLMLDTPK
TVCEAIPDFKQWYWVVAYPGISLSTSRMRQLMPSEFDKQTTIDFGRYLSAFVHASYKQDAELAISVLKDVLAEPYRAPEI
PNYQKAKSALAELGMLTTGISGSGPTLFSITDDLDVAKQAQQWLDANYVEPGKGFSHICRIDNQGTRRVD

Specific function: Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate [H]

COG id: COG0083

COG function: function code E; Homoserine kinase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GHMP kinase family. Homoserine kinase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786184, Length=309, Percent_Identity=52.4271844660194, Blast_Score=355, Evalue=3e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006204
- InterPro:   IPR013750
- InterPro:   IPR006203
- InterPro:   IPR000870
- InterPro:   IPR020568
- InterPro:   IPR014721 [H]

Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N [H]

EC number: =2.7.1.39 [H]

Molecular weight: Translated: 33743; Mature: 33611

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS00627 GHMP_KINASES_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTIYAPASMGNVGVGFDLLGAALAPIDGSLLGDTVKVESAEQGLSLVLAGHWAGKLPQ
CEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCHHCCCEEEEEECCCCCCCC
DERDNIVYQCAEFFLSHLDKDVGLKLTLEKNLPVGSGLGSSASSVVAALAALNDFFDKPF
CCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
SEQDLLRLMGEFEGKISGSIHYDNVAPCYLGGMQLMLDTPKTVCEAIPDFKQWYWVVAYP
CHHHHHHHHHHHCCCCCCEEEECCCCCHHHCCCCEEECCHHHHHHHCCCHHHEEEEEEEC
GISLSTSRMRQLMPSEFDKQTTIDFGRYLSAFVHASYKQDAELAISVLKDVLAEPYRAPE
CCCCCHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
IPNYQKAKSALAELGMLTTGISGSGPTLFSITDDLDVAKQAQQWLDANYVEPGKGFSHIC
CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHE
RIDNQGTRRVD
ECCCCCCCCCC
>Mature Secondary Structure 
SVTIYAPASMGNVGVGFDLLGAALAPIDGSLLGDTVKVESAEQGLSLVLAGHWAGKLPQ
EEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECCHHCCCEEEEEECCCCCCCC
DERDNIVYQCAEFFLSHLDKDVGLKLTLEKNLPVGSGLGSSASSVVAALAALNDFFDKPF
CCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
SEQDLLRLMGEFEGKISGSIHYDNVAPCYLGGMQLMLDTPKTVCEAIPDFKQWYWVVAYP
CHHHHHHHHHHHCCCCCCEEEECCCCCHHHCCCCEEECCHHHHHHHCCCHHHEEEEEEEC
GISLSTSRMRQLMPSEFDKQTTIDFGRYLSAFVHASYKQDAELAISVLKDVLAEPYRAPE
CCCCCHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
IPNYQKAKSALAELGMLTTGISGSGPTLFSITDDLDVAKQAQQWLDANYVEPGKGFSHIC
CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCHHHHE
RIDNQGTRRVD
ECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]