| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is thrA [H]
Identifier: 157960894
GI number: 157960894
Start: 1289165
End: 1291630
Strand: Direct
Name: thrA [H]
Synonym: Spea_1066
Alternate gene names: 157960894
Gene position: 1289165-1291630 (Clockwise)
Preceding gene: 157960891
Following gene: 157960895
Centisome position: 24.91
GC content: 47.49
Gene sequence:
>2466_bases ATGAAAGTTATGAAGTTTGGTGGTACCTCGCTTGCTAATTGGCAGCGTTTTAAAGGCGCAGCGGAGATTGTTAATCGCTC AGCAAGTTCTGAACCGACAGCAGTGGTTTTGTCCGCGCCAGCGACGGTAACAAATGGCCTGATTGAGATGGTTGAGGTTG CCATCAATGCCGGTGATTATCACGCCGTTCTTGCTAAGGTTGAAAAGGTCTTTAACGATTTATATGGCGCAGCTGCTGAG AGCTTAAACCCTGAGCAAAACGCAGTTCTAGCGGAGAAGCTTAAGTTACAGCTGAGTTTTTGGCAGAGTAAATTGCAGGG GATGAGCTTACTTGGCGAGTGCCCTGAAAGTGTCGAAGCGCAGATCTTGGTTGGCGGTGAGAAGCTGTCGTCTGCGTTAA TGGTCGAGGTGATGAAATCCTTTAACCATAGTGCCGACCTATTAGTGCCTGAGTCTTTACTGCTCGGCTATGGACCTCGT CTTGAATCTGCCGTCGATATTGAAGCCAGTAAACTTCGTTTTAACGCTGTGGATCTGTCTGCGGTAACAGTTTGGGTGAT GCCAGGCTTTACTGCCGGTGATTCCCAAGGCAATGTTGTAACACTTGGACGTAACGGATCCGATTATTCAGCTGCGGTAT TATCGGCTTGTATTGGCGCCAGTTGTTGTGAGATCTGGACCGATGTTGACGGTATCTATAATACTGACCCAAGAGTGGTT GCCGATGCGAAACTGCTGTCACAACTCAGTTATCAAGAGGCGATGGAGGTTTCATATTTTGGGGCGAAAGTTTTGCACCC TAAGACAGTGGCACCTATCGCGCAGTATCAGATCCCTTGTTATATCCGTAACACTTTTAATCCTGAGGCCGTGGGTACTC TAGTATCTGATAAGCCCGATGAAACAGGGCTTAATGTAAAAGCCATTTCTAACCTAGACGATCAAACTATGTTCGATGTC TCAGGTCCGGGTATGAAGGGTATGGTGGGTATGGCGAGCCGCACACTGGGAGCCATTTCTCGCTCAGGGGTTTCGGTGTC TTTGATCACCCAGAGTTCCTCTGAATATAGCATCAGCTTCTGTGTTGCCACTGAAGATGCCATTAAGGCCAAGTTCGCTT TAGAGCAAGAATTTGAGCTTGAGCTTAAAAGTGAGATTTTAGAGCCGATAGAGATGCGTCATAACTTAGCAATTGTCTCC TTAATTGGTGATGGCATGCGCACCCATAAAGGTGTGGCGGCTAAGTTCTTCCAAGCGCTTGCTCAAGCAACCGTTAATAT CGTGGCGATTGCTCAGGGCTCTTCAGAACGTTCAATCTCTGCGGTTGTAGAGCAGCGAAAAACTAAGCATGCTATCGCAG CCTGTCATCAATCTTTCTTCGATGTGCAGCACTACTTAGATGTATTCCTTGTCGGTTGCGGCAACGTGGGCGCAGGTTTG CTTGAGCAGATAAAGCTGCAACGTAGCATGTTAAAGGAGCAGCATATTGCTATTCGTGTCTGCGGCATCGTTAACTCTAA AAAGATGTTGCTAGACCCTCAAGGCATCGACTTAGGCAACTGGCAGGGCGTATTGGCCGATAGTGAACAAATTGCCGATC TTGATGCCATGCTCGTATGGGCAAAGGAGCAGCAATTACTCAACCCTGTGCTGGTAGACTGCACTTCGAGTGAATTGGTT TCAAATAAGTATCTTGATGTGATGAATGCAGGTCTGCACGTAGTGACGCCAAATAAGAAGGCCAATACTCGAGATATGGC TTATTACCAAGAACTGCGTAGAACAGCGCTTAAGCAGCGTCGTCAGTTCCTGTATGAAACCACGGTTGGCGCTGGATTGC CGGTTATCGACAACTTAAAGAAGTTACTGTTTGCCGGAGACAAACTGCTGCGTTTCAACGGTATTTTATCAGGAAGTCTG TCTTATATCTTCGGGATGCTAGATGAAGGCATGACGCTTTCACAAGCAACATCAATCGCCAGAGAGAAGTGTTTCACAGA GCCTGATCCTCGTGATGATTTAAGTGGTATGGATGTTGCGCGTAAGGTGCTGATCCTTGCTAGAGAGGTGGGGATGGAAC TTGAGCTGAGTGATATCTATGTCGAATCTGTGCTACCAGAATCATTCGATGCCTGTGGTGATGTTGAGCAGTTTATGGCA AATCTTCCAGCGGTAGACTCAAGCGTAGCTCAGCGAATTGAAGCGGCTAAGGCACAAGGCAAGGTATTGCGTTATGTCGG TCAGATCGATGACGAGGGTTGTAAAGTGAGAATAGCCGAAGTCGATGCAAGCGATCCGCTATACAGTGTTAAAGGCGGCG AGAACGCCCTAGCTTTCTATAGTCGTTACTACCAGCCAATTCCATTTGTGCTTAGAGGTTATGGCGCCGGTACCGATGTG ACAGCTGCTGGTGCATTTGCCGATATATTACGTACTTTAAATTGGACTCGTGAGGTGGGCGTATGA
Upstream 100 bases:
>100_bases GGGCTAAGCACAACCTGATATAAGTGAAATATCAAGCCCGCTCCCCCTAAAGGAGCGGGCTTTTTTGTTTCTTAAGGTGG CGCGGTAAAAGGAGTTTACG
Downstream 100 bases:
>100_bases GCGTAACCATTTATGCTCCAGCATCTATGGGCAATGTCGGAGTCGGTTTCGATCTGCTTGGTGCCGCTTTGGCACCAATA GATGGCAGCCTACTGGGCGA
Product: bifunctional aspartokinase I/homoserine dehydrogenase I
Products: NA
Alternate protein names: Aspartokinase I/homoserine dehydrogenase I; AKI-HDI; Aspartokinase; Homoserine dehydrogenase [H]
Number of amino acids: Translated: 821; Mature: 821
Protein sequence:
>821_residues MKVMKFGGTSLANWQRFKGAAEIVNRSASSEPTAVVLSAPATVTNGLIEMVEVAINAGDYHAVLAKVEKVFNDLYGAAAE SLNPEQNAVLAEKLKLQLSFWQSKLQGMSLLGECPESVEAQILVGGEKLSSALMVEVMKSFNHSADLLVPESLLLGYGPR LESAVDIEASKLRFNAVDLSAVTVWVMPGFTAGDSQGNVVTLGRNGSDYSAAVLSACIGASCCEIWTDVDGIYNTDPRVV ADAKLLSQLSYQEAMEVSYFGAKVLHPKTVAPIAQYQIPCYIRNTFNPEAVGTLVSDKPDETGLNVKAISNLDDQTMFDV SGPGMKGMVGMASRTLGAISRSGVSVSLITQSSSEYSISFCVATEDAIKAKFALEQEFELELKSEILEPIEMRHNLAIVS LIGDGMRTHKGVAAKFFQALAQATVNIVAIAQGSSERSISAVVEQRKTKHAIAACHQSFFDVQHYLDVFLVGCGNVGAGL LEQIKLQRSMLKEQHIAIRVCGIVNSKKMLLDPQGIDLGNWQGVLADSEQIADLDAMLVWAKEQQLLNPVLVDCTSSELV SNKYLDVMNAGLHVVTPNKKANTRDMAYYQELRRTALKQRRQFLYETTVGAGLPVIDNLKKLLFAGDKLLRFNGILSGSL SYIFGMLDEGMTLSQATSIAREKCFTEPDPRDDLSGMDVARKVLILAREVGMELELSDIYVESVLPESFDACGDVEQFMA NLPAVDSSVAQRIEAAKAQGKVLRYVGQIDDEGCKVRIAEVDASDPLYSVKGGENALAFYSRYYQPIPFVLRGYGAGTDV TAAGAFADILRTLNWTREVGV
Sequences:
>Translated_821_residues MKVMKFGGTSLANWQRFKGAAEIVNRSASSEPTAVVLSAPATVTNGLIEMVEVAINAGDYHAVLAKVEKVFNDLYGAAAE SLNPEQNAVLAEKLKLQLSFWQSKLQGMSLLGECPESVEAQILVGGEKLSSALMVEVMKSFNHSADLLVPESLLLGYGPR LESAVDIEASKLRFNAVDLSAVTVWVMPGFTAGDSQGNVVTLGRNGSDYSAAVLSACIGASCCEIWTDVDGIYNTDPRVV ADAKLLSQLSYQEAMEVSYFGAKVLHPKTVAPIAQYQIPCYIRNTFNPEAVGTLVSDKPDETGLNVKAISNLDDQTMFDV SGPGMKGMVGMASRTLGAISRSGVSVSLITQSSSEYSISFCVATEDAIKAKFALEQEFELELKSEILEPIEMRHNLAIVS LIGDGMRTHKGVAAKFFQALAQATVNIVAIAQGSSERSISAVVEQRKTKHAIAACHQSFFDVQHYLDVFLVGCGNVGAGL LEQIKLQRSMLKEQHIAIRVCGIVNSKKMLLDPQGIDLGNWQGVLADSEQIADLDAMLVWAKEQQLLNPVLVDCTSSELV SNKYLDVMNAGLHVVTPNKKANTRDMAYYQELRRTALKQRRQFLYETTVGAGLPVIDNLKKLLFAGDKLLRFNGILSGSL SYIFGMLDEGMTLSQATSIAREKCFTEPDPRDDLSGMDVARKVLILAREVGMELELSDIYVESVLPESFDACGDVEQFMA NLPAVDSSVAQRIEAAKAQGKVLRYVGQIDDEGCKVRIAEVDASDPLYSVKGGENALAFYSRYYQPIPFVLRGYGAGTDV TAAGAFADILRTLNWTREVGV >Mature_821_residues MKVMKFGGTSLANWQRFKGAAEIVNRSASSEPTAVVLSAPATVTNGLIEMVEVAINAGDYHAVLAKVEKVFNDLYGAAAE SLNPEQNAVLAEKLKLQLSFWQSKLQGMSLLGECPESVEAQILVGGEKLSSALMVEVMKSFNHSADLLVPESLLLGYGPR LESAVDIEASKLRFNAVDLSAVTVWVMPGFTAGDSQGNVVTLGRNGSDYSAAVLSACIGASCCEIWTDVDGIYNTDPRVV ADAKLLSQLSYQEAMEVSYFGAKVLHPKTVAPIAQYQIPCYIRNTFNPEAVGTLVSDKPDETGLNVKAISNLDDQTMFDV SGPGMKGMVGMASRTLGAISRSGVSVSLITQSSSEYSISFCVATEDAIKAKFALEQEFELELKSEILEPIEMRHNLAIVS LIGDGMRTHKGVAAKFFQALAQATVNIVAIAQGSSERSISAVVEQRKTKHAIAACHQSFFDVQHYLDVFLVGCGNVGAGL LEQIKLQRSMLKEQHIAIRVCGIVNSKKMLLDPQGIDLGNWQGVLADSEQIADLDAMLVWAKEQQLLNPVLVDCTSSELV SNKYLDVMNAGLHVVTPNKKANTRDMAYYQELRRTALKQRRQFLYETTVGAGLPVIDNLKKLLFAGDKLLRFNGILSGSL SYIFGMLDEGMTLSQATSIAREKCFTEPDPRDDLSGMDVARKVLILAREVGMELELSDIYVESVLPESFDACGDVEQFMA NLPAVDSSVAQRIEAAKAQGKVLRYVGQIDDEGCKVRIAEVDASDPLYSVKGGENALAFYSRYYQPIPFVLRGYGAGTDV TAAGAFADILRTLNWTREVGV
Specific function: Catalyzes 2 nonconsecutive reactions in the common biosynthetic pathway leading from Asp to diaminopimelate and Lys, to Met, and to Thr and Ile. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ACT domains [H]
Homologues:
Organism=Escherichia coli, GI1786183, Length=821, Percent_Identity=57.1254567600487, Blast_Score=925, Evalue=0.0, Organism=Escherichia coli, GI1790376, Length=822, Percent_Identity=30.7785888077859, Blast_Score=339, Evalue=5e-94, Organism=Escherichia coli, GI1790455, Length=467, Percent_Identity=29.5503211991435, Blast_Score=160, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6322599, Length=336, Percent_Identity=33.0357142857143, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6320893, Length=498, Percent_Identity=25.5020080321285, Blast_Score=135, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR001048 - InterPro: IPR005106 - InterPro: IPR001341 - InterPro: IPR018042 - InterPro: IPR011147 - InterPro: IPR001342 - InterPro: IPR019811 - InterPro: IPR016040 [H]
Pfam domain/function: PF00696 AA_kinase; PF01842 ACT; PF00742 Homoserine_dh; PF03447 NAD_binding_3 [H]
EC number: =2.7.2.4; =1.1.1.3 [H]
Molecular weight: Translated: 88945; Mature: 88945
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVMKFGGTSLANWQRFKGAAEIVNRSASSEPTAVVLSAPATVTNGLIEMVEVAINAGDY CCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCH HAVLAKVEKVFNDLYGAAAESLNPEQNAVLAEKLKLQLSFWQSKLQGMSLLGECPESVEA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE QILVGGEKLSSALMVEVMKSFNHSADLLVPESLLLGYGPRLESAVDIEASKLRFNAVDLS EEEECHHHHHHHHHHHHHHHCCCCCCEECCHHHHHCCCCCCCCCCCCCHHHEEEEEEEEE AVTVWVMPGFTAGDSQGNVVTLGRNGSDYSAAVLSACIGASCCEIWTDVDGIYNTDPRVV EEEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCHH ADAKLLSQLSYQEAMEVSYFGAKVLHPKTVAPIAQYQIPCYIRNTFNPEAVGTLVSDKPD HHHHHHHHHHHHHHHHHHHCCCEECCCCHHCCHHHEECCEEEECCCCHHHHHHHHCCCCC ETGLNVKAISNLDDQTMFDVSGPGMKGMVGMASRTLGAISRSGVSVSLITQSSSEYSISF CCCCCEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEE CVATEDAIKAKFALEQEFELELKSEILEPIEMRHNLAIVSLIGDGMRTHKGVAAKFFQAL EEECCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHH AQATVNIVAIAQGSSERSISAVVEQRKTKHAIAACHQSFFDVQHYLDVFLVGCGNVGAGL HHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHH LEQIKLQRSMLKEQHIAIRVCGIVNSKKMLLDPQGIDLGNWQGVLADSEQIADLDAMLVW HHHHHHHHHHHHHHCEEEEEEEECCCCCEEECCCCCCCCCCCCEECCCHHHHHHHHHEEE AKEQQLLNPVLVDCTSSELVSNKYLDVMNAGLHVVTPNKKANTRDMAYYQELRRTALKQR HHHHHHCCHHEEECCCHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH RQFLYETTVGAGLPVIDNLKKLLFAGDKLLRFNGILSGSLSYIFGMLDEGMTLSQATSIA HHHHHHHHCCCCCCHHHHHHHHHHCCCHHEEECCCHHHHHHHHHHHHHCCCCHHHHHHHH REKCFTEPDPRDDLSGMDVARKVLILAREVGMELELSDIYVESVLPESFDACGDVEQFMA HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCHHHHHCCCHHHHHH NLPAVDSSVAQRIEAAKAQGKVLRYVGQIDDEGCKVRIAEVDASDPLYSVKGGENALAFY HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECCCCHHHHHH SRYYQPIPFVLRGYGAGTDVTAAGAFADILRTLNWTREVGV HHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure MKVMKFGGTSLANWQRFKGAAEIVNRSASSEPTAVVLSAPATVTNGLIEMVEVAINAGDY CCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCH HAVLAKVEKVFNDLYGAAAESLNPEQNAVLAEKLKLQLSFWQSKLQGMSLLGECPESVEA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE QILVGGEKLSSALMVEVMKSFNHSADLLVPESLLLGYGPRLESAVDIEASKLRFNAVDLS EEEECHHHHHHHHHHHHHHHCCCCCCEECCHHHHHCCCCCCCCCCCCCHHHEEEEEEEEE AVTVWVMPGFTAGDSQGNVVTLGRNGSDYSAAVLSACIGASCCEIWTDVDGIYNTDPRVV EEEEEEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCHH ADAKLLSQLSYQEAMEVSYFGAKVLHPKTVAPIAQYQIPCYIRNTFNPEAVGTLVSDKPD HHHHHHHHHHHHHHHHHHHCCCEECCCCHHCCHHHEECCEEEECCCCHHHHHHHHCCCCC ETGLNVKAISNLDDQTMFDVSGPGMKGMVGMASRTLGAISRSGVSVSLITQSSSEYSISF CCCCCEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEE CVATEDAIKAKFALEQEFELELKSEILEPIEMRHNLAIVSLIGDGMRTHKGVAAKFFQAL EEECCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHH AQATVNIVAIAQGSSERSISAVVEQRKTKHAIAACHQSFFDVQHYLDVFLVGCGNVGAGL HHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHH LEQIKLQRSMLKEQHIAIRVCGIVNSKKMLLDPQGIDLGNWQGVLADSEQIADLDAMLVW HHHHHHHHHHHHHHCEEEEEEEECCCCCEEECCCCCCCCCCCCEECCCHHHHHHHHHEEE AKEQQLLNPVLVDCTSSELVSNKYLDVMNAGLHVVTPNKKANTRDMAYYQELRRTALKQR HHHHHHCCHHEEECCCHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHHHHH RQFLYETTVGAGLPVIDNLKKLLFAGDKLLRFNGILSGSLSYIFGMLDEGMTLSQATSIA HHHHHHHHCCCCCCHHHHHHHHHHCCCHHEEECCCHHHHHHHHHHHHHCCCCHHHHHHHH REKCFTEPDPRDDLSGMDVARKVLILAREVGMELELSDIYVESVLPESFDACGDVEQFMA HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCHHHHHCCCHHHHHH NLPAVDSSVAQRIEAAKAQGKVLRYVGQIDDEGCKVRIAEVDASDPLYSVKGGENALAFY HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECCCCHHHHHH SRYYQPIPFVLRGYGAGTDVTAAGAFADILRTLNWTREVGV HHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7003595; 1630901; 7610040; 9278503; 6277952; 2410621; 387092; 6298218; 390305 [H]