| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960812
Identifier: 157960812
GI number: 157960812
Start: 1197857
End: 1198660
Strand: Direct
Name: 157960812
Synonym: Spea_0984
Alternate gene names: NA
Gene position: 1197857-1198660 (Clockwise)
Preceding gene: 157960804
Following gene: 157960813
Centisome position: 23.15
GC content: 44.15
Gene sequence:
>804_bases ATGCCAAATTATCATCGTTGGGCCGATCGCTTGCAAGTGATTGAACGACAAATTAGACCTTCGAGTGTCTATTTATTACT TTTACTCATAGTCGCCTTTGCGTTAGGCGCACTCATTTACGATGTGGCAAAGGCTCGTTACCTGCCAAAAGTGGAGGCAA AAGTCGATAACAGCGAGCGCTATGTACAAGAGTTGCACCAGCAAGCGCAGACTTTGGCGGCGCGTAATATTGAGTTGGCA TTAGAACGCGAAGCCAATAGTGACATGCAGGCGATGTTTGTTGAGCAGAATGCAAAACAGAAAGAGTTAGAGCGTGAACT GGCATTTTATCGCAGCGTAATGGCTCCTGAAAATATCGCCGATGGCGTGGCAATTAATGGCTTAGAACTAGAGCCAAGCC TTGAGCCGCGCCAATATCGTATCAAGCTAGTATTGACACAGTTAGAGAAGCGTAAGCGCTCTTTAGCGGGTCGCAGTGAA ATCACATTCGTTGGTTTGCAAGACGGCAAAACGGTTAGCCTTAAGCTATCAGATTTGACTGATGCCTCGTTTAAATTCAA ATTTAGGTATTTTCAGGTATTAGAGGGCGAATTTACATTGCCTGAGGGCTTTAGCTTGTCTAGAGTGAAGGCCAAAGTGA TAGTGCCTACGAGTCGTTGGACTAAAGGTTCGCAAACTGAACAGGAATATAGTGCACAAGATCTACTTGTGGATGAAAAA GAGCAGGGCATATTACTTGAACAAAACACTCAGGTATTAGATAATTCTGCACAGCAAACAGAAGTAAGAGGTAGTAATGA CTGA
Upstream 100 bases:
>100_bases TCGCTTCTTAACAATTGCTGGATGCACAGGAATTTCCAAAATTTATGTTTGTCACATTGATTTCAAAATGTGAGATTTTT TATTAAGGGGCTGTTACTTA
Downstream 100 bases:
>100_bases ACAAGCTGAAGATGCTTTGCCAATCCGTTTCACCGATGCGGCGGCTTCAAAAGTAAAAACCTTGCTCGAAGAGGAAGAAA ATGACGCACTTAAGTTACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MPNYHRWADRLQVIERQIRPSSVYLLLLLIVAFALGALIYDVAKARYLPKVEAKVDNSERYVQELHQQAQTLAARNIELA LEREANSDMQAMFVEQNAKQKELERELAFYRSVMAPENIADGVAINGLELEPSLEPRQYRIKLVLTQLEKRKRSLAGRSE ITFVGLQDGKTVSLKLSDLTDASFKFKFRYFQVLEGEFTLPEGFSLSRVKAKVIVPTSRWTKGSQTEQEYSAQDLLVDEK EQGILLEQNTQVLDNSAQQTEVRGSND
Sequences:
>Translated_267_residues MPNYHRWADRLQVIERQIRPSSVYLLLLLIVAFALGALIYDVAKARYLPKVEAKVDNSERYVQELHQQAQTLAARNIELA LEREANSDMQAMFVEQNAKQKELERELAFYRSVMAPENIADGVAINGLELEPSLEPRQYRIKLVLTQLEKRKRSLAGRSE ITFVGLQDGKTVSLKLSDLTDASFKFKFRYFQVLEGEFTLPEGFSLSRVKAKVIVPTSRWTKGSQTEQEYSAQDLLVDEK EQGILLEQNTQVLDNSAQQTEVRGSND >Mature_266_residues PNYHRWADRLQVIERQIRPSSVYLLLLLIVAFALGALIYDVAKARYLPKVEAKVDNSERYVQELHQQAQTLAARNIELAL EREANSDMQAMFVEQNAKQKELERELAFYRSVMAPENIADGVAINGLELEPSLEPRQYRIKLVLTQLEKRKRSLAGRSEI TFVGLQDGKTVSLKLSDLTDASFKFKFRYFQVLEGEFTLPEGFSLSRVKAKVIVPTSRWTKGSQTEQEYSAQDLLVDEKE QGILLEQNTQVLDNSAQQTEVRGSND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30512; Mature: 30381
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNYHRWADRLQVIERQIRPSSVYLLLLLIVAFALGALIYDVAKARYLPKVEAKVDNSER CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHH YVQELHQQAQTLAARNIELALEREANSDMQAMFVEQNAKQKELERELAFYRSVMAPENIA HHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC DGVAINGLELEPSLEPRQYRIKLVLTQLEKRKRSLAGRSEITFVGLQDGKTVSLKLSDLT CCEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCC DASFKFKFRYFQVLEGEFTLPEGFSLSRVKAKVIVPTSRWTKGSQTEQEYSAQDLLVDEK CCCEEEEEEEEEEECCCCCCCCCCCHHHEEEEEEECCCCCCCCCCCHHHHHHHHHEECCC EQGILLEQNTQVLDNSAQQTEVRGSND CCCEEEECCCHHHCCCCHHCCCCCCCC >Mature Secondary Structure PNYHRWADRLQVIERQIRPSSVYLLLLLIVAFALGALIYDVAKARYLPKVEAKVDNSER CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHH YVQELHQQAQTLAARNIELALEREANSDMQAMFVEQNAKQKELERELAFYRSVMAPENIA HHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC DGVAINGLELEPSLEPRQYRIKLVLTQLEKRKRSLAGRSEITFVGLQDGKTVSLKLSDLT CCEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCC DASFKFKFRYFQVLEGEFTLPEGFSLSRVKAKVIVPTSRWTKGSQTEQEYSAQDLLVDEK CCCEEEEEEEEEEECCCCCCCCCCCHHHEEEEEEECCCCCCCCCCCHHHHHHHHHEECCC EQGILLEQNTQVLDNSAQQTEVRGSND CCCEEEECCCHHHCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA