| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is erpA [H]
Identifier: 157960813
GI number: 157960813
Start: 1198653
End: 1199003
Strand: Direct
Name: erpA [H]
Synonym: Spea_0985
Alternate gene names: 157960813
Gene position: 1198653-1199003 (Clockwise)
Preceding gene: 157960812
Following gene: 157960820
Centisome position: 23.16
GC content: 45.3
Gene sequence:
>351_bases ATGACTGAACAAGCTGAAGATGCTTTGCCAATCCGTTTCACCGATGCGGCGGCTTCAAAAGTAAAAACCTTGCTCGAAGA GGAAGAAAATGACGCACTTAAGTTACGTGTTTATGTAACGGGTGGCGGATGCTCAGGTTTCCAGTATGGCTTTACTTTCG ATGAGAAGGTCAACGAAGGTGACTTTACTGTAGAGAAGCAAGGTGTTCAGTTGGTTGTTGATCCAATGAGCCTACAGTAC CTTGTTGGTGGCGAAGTGGATTACACTTCAGGCCTAGAAGGTTCACGCTTCTTCGTTAAGAATCCAAATGCAACGACCAC ATGTGGTTGTGGTGCAAGCTTCTCTGTTTAA
Upstream 100 bases:
>100_bases CAAGATCTACTTGTGGATGAAAAAGAGCAGGGCATATTACTTGAACAAAACACTCAGGTATTAGATAATTCTGCACAGCA AACAGAAGTAAGAGGTAGTA
Downstream 100 bases:
>100_bases CCTTTGTTGAGTTAAATAGAGTAAAAAAGCCGTCGAATGACGGCTTTTTTGTGTCTGTTCATTCAAGATAAGAGTTTAAC GCATGATGTTGAGGTTGAAC
Product: iron-sulfur cluster insertion protein ErpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MTEQAEDALPIRFTDAAASKVKTLLEEEENDALKLRVYVTGGGCSGFQYGFTFDEKVNEGDFTVEKQGVQLVVDPMSLQY LVGGEVDYTSGLEGSRFFVKNPNATTTCGCGASFSV
Sequences:
>Translated_116_residues MTEQAEDALPIRFTDAAASKVKTLLEEEENDALKLRVYVTGGGCSGFQYGFTFDEKVNEGDFTVEKQGVQLVVDPMSLQY LVGGEVDYTSGLEGSRFFVKNPNATTTCGCGASFSV >Mature_115_residues TEQAEDALPIRFTDAAASKVKTLLEEEENDALKLRVYVTGGGCSGFQYGFTFDEKVNEGDFTVEKQGVQLVVDPMSLQYL VGGEVDYTSGLEGSRFFVKNPNATTTCGCGASFSV
Specific function: Required for insertion of 4Fe-4S clusters for at least ispG [H]
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
Organism=Homo sapiens, GI160420328, Length=107, Percent_Identity=45.7943925233645, Blast_Score=83, Evalue=5e-17, Organism=Homo sapiens, GI52426768, Length=106, Percent_Identity=31.1320754716981, Blast_Score=63, Evalue=6e-11, Organism=Escherichia coli, GI1786351, Length=109, Percent_Identity=77.9816513761468, Blast_Score=185, Evalue=7e-49, Organism=Escherichia coli, GI1788877, Length=110, Percent_Identity=40, Blast_Score=69, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71998452, Length=121, Percent_Identity=39.6694214876033, Blast_Score=84, Evalue=2e-17, Organism=Caenorhabditis elegans, GI193209025, Length=106, Percent_Identity=34.9056603773585, Blast_Score=77, Evalue=1e-15, Organism=Caenorhabditis elegans, GI25146411, Length=106, Percent_Identity=34.9056603773585, Blast_Score=77, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6323001, Length=106, Percent_Identity=34.9056603773585, Blast_Score=72, Evalue=2e-14, Organism=Drosophila melanogaster, GI24649697, Length=83, Percent_Identity=48.1927710843374, Blast_Score=77, Evalue=2e-15, Organism=Drosophila melanogaster, GI24642263, Length=112, Percent_Identity=34.8214285714286, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 12524; Mature: 12393
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQAEDALPIRFTDAAASKVKTLLEEEENDALKLRVYVTGGGCSGFQYGFTFDEKVNEG CCCCCCCCCCEEECCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCEECCCCCCC DFTVEKQGVQLVVDPMSLQYLVGGEVDYTSGLEGSRFFVKNPNATTTCGCGASFSV CEEEECCCCEEEECCCEEEEEECCCEECCCCCCCCEEEEECCCCCEEECCCCCCCC >Mature Secondary Structure TEQAEDALPIRFTDAAASKVKTLLEEEENDALKLRVYVTGGGCSGFQYGFTFDEKVNEG CCCCCCCCCEEECCHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCEECCCCCCC DFTVEKQGVQLVVDPMSLQYLVGGEVDYTSGLEGSRFFVKNPNATTTCGCGASFSV CEEEECCCCEEEECCCEEEEEECCCEECCCCCCCCEEEEECCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA