BacMap

Definition	Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession	NC_009901
Length	5,174,581

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The map label for this gene is gabD [H]

Identifier: 157960779

GI number: 157960779

Start: 1160248

End: 1161696

Strand: Direct

Name: gabD [H]

Synonym: Spea_0951

Alternate gene names: 157960779

Gene position: 1160248-1161696 (Clockwise)

Preceding gene: 157960778

Following gene: 157960780

Centisome position: 22.42

GC content: 51.48

Gene sequence:

>1449_bases
GTGCAGTTAAATGATATGAGTTTACTACGCCAGCAATGTTATATAGATGGTCAGTGGCTTGAAGCCATCAGTGGTGAAAA
GGTTGAGATAGCCGATCCCGCCACCCATAGAGTGATTGGCAGTGTGCCTGTGATGGGCACCACTGAAACTAAAGCCGCCA
TCAGCGCAGCCGAGAAGGCATTACCCGCTTGGCGGGCGTTAACCGCAAAAGAGCGTGGTGCCAAGCTAAATCGTTGGTTT
GAGCTATTGCTTGAGCATCAAGACGACTTAGCACTGATGATGACAACAGAGCAGGGCAAACCATTAGCGGAAGCCAAAGG
CGAAGTCGCCTATGCGGCGTCGTTTATCGAGTGGTTTGCCGAAGAAGCCAAGCGTGTCTATGGCGATACCATCCCTGGCC
ATCAAGGTGATAAACGTTTGATGGTGATTAAGCAAAGCGTTGGTGTTACCGCAGCTATTACGCCTTGGAACTTCCCTGCA
GCGATGATCACTCGTAAAGCCGCACCTGCGTTAGCCGCAGGTTGCACCATGGTGGTAAAACCTGCACCGCAAACTCCCTT
CACTGCATTAGCTCTGGCAGAGCTTGCCGAGCGCGCAGGCATTCCTAAAGGCGTCTTTAGTGTTGTCACAGGTGATGCCA
TTGGCATTGGTAACGAGCTTTGTAGCAATCCAGTGGTTCGTAAGCTCTCTTTCACCGGATCGACACCTGTTGGCATTAAG
CTGATGCAGCAGTGCGCGCCGACCCTTAAGAAGATGTCACTGGAGCTGGGCGGTAATGCCCCCTTTATCGTGTTTAATGA
TGCCGATATCGACGCCGCCGTTGAAGGTGCAATGATTGCTAAATACCGCAATGCTGGACAGACCTGTGTCTGCGCCAACC
GCATCTATGTTCAGGATGCAGTTTACGATGAGTTTGCCGAAAAACTGGCTGCTGCGGTTGCTAAGCTCAAGGTGGGTGTA
GGTACTGAGGAGGGCGTTACCACTGGGCCACTCATAAATGCCGACGCCGTTGCCAAAGTACAGCGTCACCTGGATGATGC
CTTATCGAAAGGCGCGACGCTGCTTGCGGGCGGTAAGCTGGCAAGTGCTGGTGGTAACTTCTTCGAGCCAACGATTTTAA
CTAGTGTCGATAAAAGCATGTTAGTGGCTAAAGAGGAAACCTTTGGGCCGCTGGCACCGCTATTTAAGTTCTCTGATGTA
GATGATGTGATTGCGCAGGCCAATGACACTGAGTTCGGTTTAGCTGCTTACTTCTATGGCCGCGATATCTCGTTGGTGTG
GAAGGTATCAGAAGCGCTGGAATACGGCATGGTCGGCGTTAATACCGGCCTTATCTCTACAGAGGTCGCGCCATTTGGCG
GCATAAAAGCCTCGGGGCTAGGCCGTGAAGGCTCAAAGTTTGGCATCGAAGAGTACTTAGAGATGAAGTACATCTGCATG
TCAGTTTAA

Upstream 100 bases:

>100_bases
GACAAGTTAGGTGTGTAACCTTATCGAGAGTATAGGGAAACCAATCACGTTTACAGCAGTCGAAAGGCGATAAGCGTTTA
AGCAAATTAAGGAGTCACCC

Downstream 100 bases:

>100_bases
TAGGATTAAGTTCATAAGTAGTTAGTTAAAAGGAATTCATTATGACAACCAATGAGTCACTTATGGTGCGACGCCAAGCC
GCTGTAGCCAATGGCGTAGG

Product: succinic semialdehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MQLNDMSLLRQQCYIDGQWLEAISGEKVEIADPATHRVIGSVPVMGTTETKAAISAAEKALPAWRALTAKERGAKLNRWF
ELLLEHQDDLALMMTTEQGKPLAEAKGEVAYAASFIEWFAEEAKRVYGDTIPGHQGDKRLMVIKQSVGVTAAITPWNFPA
AMITRKAAPALAAGCTMVVKPAPQTPFTALALAELAERAGIPKGVFSVVTGDAIGIGNELCSNPVVRKLSFTGSTPVGIK
LMQQCAPTLKKMSLELGGNAPFIVFNDADIDAAVEGAMIAKYRNAGQTCVCANRIYVQDAVYDEFAEKLAAAVAKLKVGV
GTEEGVTTGPLINADAVAKVQRHLDDALSKGATLLAGGKLASAGGNFFEPTILTSVDKSMLVAKEETFGPLAPLFKFSDV
DDVIAQANDTEFGLAAYFYGRDISLVWKVSEALEYGMVGVNTGLISTEVAPFGGIKASGLGREGSKFGIEEYLEMKYICM
SV

Sequences:

>Translated_482_residues
MQLNDMSLLRQQCYIDGQWLEAISGEKVEIADPATHRVIGSVPVMGTTETKAAISAAEKALPAWRALTAKERGAKLNRWF
ELLLEHQDDLALMMTTEQGKPLAEAKGEVAYAASFIEWFAEEAKRVYGDTIPGHQGDKRLMVIKQSVGVTAAITPWNFPA
AMITRKAAPALAAGCTMVVKPAPQTPFTALALAELAERAGIPKGVFSVVTGDAIGIGNELCSNPVVRKLSFTGSTPVGIK
LMQQCAPTLKKMSLELGGNAPFIVFNDADIDAAVEGAMIAKYRNAGQTCVCANRIYVQDAVYDEFAEKLAAAVAKLKVGV
GTEEGVTTGPLINADAVAKVQRHLDDALSKGATLLAGGKLASAGGNFFEPTILTSVDKSMLVAKEETFGPLAPLFKFSDV
DDVIAQANDTEFGLAAYFYGRDISLVWKVSEALEYGMVGVNTGLISTEVAPFGGIKASGLGREGSKFGIEEYLEMKYICM
SV
>Mature_482_residues
MQLNDMSLLRQQCYIDGQWLEAISGEKVEIADPATHRVIGSVPVMGTTETKAAISAAEKALPAWRALTAKERGAKLNRWF
ELLLEHQDDLALMMTTEQGKPLAEAKGEVAYAASFIEWFAEEAKRVYGDTIPGHQGDKRLMVIKQSVGVTAAITPWNFPA
AMITRKAAPALAAGCTMVVKPAPQTPFTALALAELAERAGIPKGVFSVVTGDAIGIGNELCSNPVVRKLSFTGSTPVGIK
LMQQCAPTLKKMSLELGGNAPFIVFNDADIDAAVEGAMIAKYRNAGQTCVCANRIYVQDAVYDEFAEKLAAAVAKLKVGV
GTEEGVTTGPLINADAVAKVQRHLDDALSKGATLLAGGKLASAGGNFFEPTILTSVDKSMLVAKEETFGPLAPLFKFSDV
DDVIAQANDTEFGLAAYFYGRDISLVWKVSEALEYGMVGVNTGLISTEVAPFGGIKASGLGREGSKFGIEEYLEMKYICM
SV

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=477, Percent_Identity=54.0880503144654, Blast_Score=508, Evalue=1e-144,
Organism=Homo sapiens, GI25777721, Length=490, Percent_Identity=52.4489795918367, Blast_Score=498, Evalue=1e-141,
Organism=Homo sapiens, GI238814322, Length=484, Percent_Identity=37.603305785124, Blast_Score=323, Evalue=2e-88,
Organism=Homo sapiens, GI21614513, Length=477, Percent_Identity=38.1551362683438, Blast_Score=317, Evalue=1e-86,
Organism=Homo sapiens, GI25777730, Length=478, Percent_Identity=37.8661087866109, Blast_Score=305, Evalue=8e-83,
Organism=Homo sapiens, GI21361176, Length=486, Percent_Identity=36.4197530864198, Blast_Score=301, Evalue=7e-82,
Organism=Homo sapiens, GI12007648, Length=480, Percent_Identity=34.7916666666667, Blast_Score=299, Evalue=5e-81,
Organism=Homo sapiens, GI115387104, Length=487, Percent_Identity=35.523613963039, Blast_Score=296, Evalue=2e-80,
Organism=Homo sapiens, GI153266822, Length=486, Percent_Identity=36.0082304526749, Blast_Score=296, Evalue=3e-80,
Organism=Homo sapiens, GI25777724, Length=484, Percent_Identity=34.9173553719008, Blast_Score=291, Evalue=1e-78,
Organism=Homo sapiens, GI25777732, Length=483, Percent_Identity=35.6107660455487, Blast_Score=290, Evalue=3e-78,
Organism=Homo sapiens, GI25777728, Length=419, Percent_Identity=36.9928400954654, Blast_Score=271, Evalue=1e-72,
Organism=Homo sapiens, GI25777726, Length=484, Percent_Identity=31.8181818181818, Blast_Score=252, Evalue=5e-67,
Organism=Homo sapiens, GI25952152, Length=473, Percent_Identity=32.3467230443975, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI11095441, Length=475, Percent_Identity=29.0526315789474, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI188035924, Length=466, Percent_Identity=29.3991416309013, Blast_Score=201, Evalue=9e-52,
Organism=Homo sapiens, GI310128103, Length=466, Percent_Identity=29.3991416309013, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI310128093, Length=464, Percent_Identity=29.7413793103448, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI301500698, Length=279, Percent_Identity=36.2007168458781, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI310128091, Length=386, Percent_Identity=31.0880829015544, Blast_Score=185, Evalue=9e-47,
Organism=Homo sapiens, GI310128089, Length=330, Percent_Identity=31.2121212121212, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI310128097, Length=256, Percent_Identity=33.203125, Blast_Score=146, Evalue=5e-35,
Organism=Homo sapiens, GI223972651, Length=462, Percent_Identity=27.2727272727273, Blast_Score=145, Evalue=6e-35,
Organism=Homo sapiens, GI310128095, Length=309, Percent_Identity=30.42071197411, Blast_Score=138, Evalue=9e-33,
Organism=Homo sapiens, GI25777736, Length=383, Percent_Identity=28.9817232375979, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI25777734, Length=383, Percent_Identity=28.9817232375979, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI238859541, Length=383, Percent_Identity=28.9817232375979, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI206597441, Length=427, Percent_Identity=27.4004683840749, Blast_Score=132, Evalue=7e-31,
Organism=Homo sapiens, GI206597439, Length=427, Percent_Identity=27.4004683840749, Blast_Score=132, Evalue=7e-31,
Organism=Homo sapiens, GI22907049, Length=427, Percent_Identity=27.4004683840749, Blast_Score=132, Evalue=7e-31,
Organism=Homo sapiens, GI73466520, Length=335, Percent_Identity=28.6567164179104, Blast_Score=132, Evalue=1e-30,
Organism=Homo sapiens, GI4557303, Length=335, Percent_Identity=28.6567164179104, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI73695881, Length=335, Percent_Identity=28.3582089552239, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI73695879, Length=335, Percent_Identity=28.3582089552239, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI4502043, Length=334, Percent_Identity=27.8443113772455, Blast_Score=122, Evalue=8e-28,
Organism=Homo sapiens, GI238814371, Length=334, Percent_Identity=27.8443113772455, Blast_Score=122, Evalue=8e-28,
Organism=Homo sapiens, GI71773324, Length=360, Percent_Identity=27.2222222222222, Blast_Score=122, Evalue=1e-27,
Organism=Homo sapiens, GI310128087, Length=284, Percent_Identity=28.8732394366197, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI223972653, Length=462, Percent_Identity=24.025974025974, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI310128099, Length=235, Percent_Identity=27.6595744680851, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI310128101, Length=226, Percent_Identity=27.8761061946903, Blast_Score=74, Evalue=4e-13,
Organism=Escherichia coli, GI1789015, Length=482, Percent_Identity=71.5767634854772, Blast_Score=731, Evalue=0.0,
Organism=Escherichia coli, GI1787684, Length=474, Percent_Identity=35.8649789029536, Blast_Score=328, Evalue=4e-91,
Organism=Escherichia coli, GI87081896, Length=482, Percent_Identity=36.5145228215768, Blast_Score=289, Evalue=3e-79,
Organism=Escherichia coli, GI1787715, Length=476, Percent_Identity=34.6638655462185, Blast_Score=268, Evalue=4e-73,
Organism=Escherichia coli, GI1786504, Length=477, Percent_Identity=34.1719077568134, Blast_Score=265, Evalue=4e-72,
Organism=Escherichia coli, GI1787558, Length=483, Percent_Identity=32.9192546583851, Blast_Score=258, Evalue=5e-70,
Organism=Escherichia coli, GI87081926, Length=447, Percent_Identity=32.8859060402685, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI87082295, Length=491, Percent_Identity=30.9572301425662, Blast_Score=227, Evalue=2e-60,
Organism=Escherichia coli, GI1788042, Length=460, Percent_Identity=30.8695652173913, Blast_Score=172, Evalue=3e-44,
Organism=Escherichia coli, GI1787250, Length=467, Percent_Identity=27.8372591006424, Blast_Score=163, Evalue=2e-41,
Organism=Escherichia coli, GI1787653, Length=363, Percent_Identity=28.099173553719, Blast_Score=96, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17534119, Length=473, Percent_Identity=47.3572938689218, Blast_Score=421, Evalue=1e-118,
Organism=Caenorhabditis elegans, GI133930964, Length=490, Percent_Identity=37.7551020408163, Blast_Score=330, Evalue=1e-90,
Organism=Caenorhabditis elegans, GI17562198, Length=476, Percent_Identity=35.5042016806723, Blast_Score=290, Evalue=1e-78,
Organism=Caenorhabditis elegans, GI25143876, Length=470, Percent_Identity=36.3829787234043, Blast_Score=287, Evalue=8e-78,
Organism=Caenorhabditis elegans, GI25143874, Length=470, Percent_Identity=36.3829787234043, Blast_Score=287, Evalue=8e-78,
Organism=Caenorhabditis elegans, GI25144435, Length=485, Percent_Identity=34.2268041237113, Blast_Score=282, Evalue=3e-76,
Organism=Caenorhabditis elegans, GI32564736, Length=418, Percent_Identity=35.4066985645933, Blast_Score=256, Evalue=1e-68,
Organism=Caenorhabditis elegans, GI71995606, Length=479, Percent_Identity=33.4029227557411, Blast_Score=250, Evalue=1e-66,
Organism=Caenorhabditis elegans, GI17551164, Length=471, Percent_Identity=31.4225053078556, Blast_Score=224, Evalue=7e-59,
Organism=Caenorhabditis elegans, GI71995613, Length=412, Percent_Identity=33.495145631068, Blast_Score=223, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI115534176, Length=467, Percent_Identity=31.9057815845824, Blast_Score=215, Evalue=4e-56,
Organism=Caenorhabditis elegans, GI71986308, Length=475, Percent_Identity=29.0526315789474, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17564084, Length=343, Percent_Identity=30.3206997084548, Blast_Score=144, Evalue=8e-35,
Organism=Caenorhabditis elegans, GI17534447, Length=463, Percent_Identity=27.8617710583153, Blast_Score=142, Evalue=5e-34,
Organism=Caenorhabditis elegans, GI25146394, Length=340, Percent_Identity=31.4705882352941, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI25146391, Length=340, Percent_Identity=31.4705882352941, Blast_Score=137, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI32566756, Length=340, Percent_Identity=31.4705882352941, Blast_Score=137, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI32564151, Length=416, Percent_Identity=27.6442307692308, Blast_Score=135, Evalue=5e-32,
Organism=Caenorhabditis elegans, GI115532534, Length=396, Percent_Identity=27.7777777777778, Blast_Score=134, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI71990744, Length=300, Percent_Identity=27.3333333333333, Blast_Score=89, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6319478, Length=481, Percent_Identity=51.1434511434511, Blast_Score=497, Evalue=1e-141,
Organism=Saccharomyces cerevisiae, GI6320917, Length=470, Percent_Identity=35.9574468085106, Blast_Score=303, Evalue=5e-83,
Organism=Saccharomyces cerevisiae, GI6324950, Length=466, Percent_Identity=34.549356223176, Blast_Score=293, Evalue=3e-80,
Organism=Saccharomyces cerevisiae, GI6325196, Length=469, Percent_Identity=33.6886993603412, Blast_Score=265, Evalue=1e-71,
Organism=Saccharomyces cerevisiae, GI6323822, Length=485, Percent_Identity=32.5773195876289, Blast_Score=258, Evalue=2e-69,
Organism=Saccharomyces cerevisiae, GI6323821, Length=485, Percent_Identity=32.1649484536082, Blast_Score=257, Evalue=3e-69,
Organism=Saccharomyces cerevisiae, GI6321828, Length=478, Percent_Identity=26.1506276150628, Blast_Score=165, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6321826, Length=461, Percent_Identity=23.644251626898, Blast_Score=100, Evalue=9e-22,
Organism=Saccharomyces cerevisiae, GI6323757, Length=347, Percent_Identity=26.2247838616715, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281362580, Length=479, Percent_Identity=50.7306889352818, Blast_Score=488, Evalue=1e-138,
Organism=Drosophila melanogaster, GI62472918, Length=479, Percent_Identity=50.7306889352818, Blast_Score=488, Evalue=1e-138,
Organism=Drosophila melanogaster, GI62472926, Length=479, Percent_Identity=50.7306889352818, Blast_Score=488, Evalue=1e-138,
Organism=Drosophila melanogaster, GI62472936, Length=479, Percent_Identity=50.7306889352818, Blast_Score=488, Evalue=1e-138,
Organism=Drosophila melanogaster, GI21356737, Length=479, Percent_Identity=50.7306889352818, Blast_Score=488, Evalue=1e-138,
Organism=Drosophila melanogaster, GI24650465, Length=475, Percent_Identity=39.3684210526316, Blast_Score=328, Evalue=4e-90,
Organism=Drosophila melanogaster, GI24585660, Length=480, Percent_Identity=34.5833333333333, Blast_Score=296, Evalue=2e-80,
Organism=Drosophila melanogaster, GI20129399, Length=482, Percent_Identity=36.9294605809129, Blast_Score=296, Evalue=3e-80,
Organism=Drosophila melanogaster, GI24638878, Length=475, Percent_Identity=28.8421052631579, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI24638876, Length=475, Percent_Identity=28.8421052631579, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI24666674, Length=475, Percent_Identity=28.6315789473684, Blast_Score=184, Evalue=9e-47,
Organism=Drosophila melanogaster, GI45552499, Length=436, Percent_Identity=25.4587155963303, Blast_Score=122, Evalue=4e-28,
Organism=Drosophila melanogaster, GI281360303, Length=436, Percent_Identity=25.4587155963303, Blast_Score=122, Evalue=5e-28,
Organism=Drosophila melanogaster, GI24668425, Length=429, Percent_Identity=24.7086247086247, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24668417, Length=429, Percent_Identity=24.7086247086247, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24668413, Length=429, Percent_Identity=24.7086247086247, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI281360299, Length=436, Percent_Identity=25.2293577981651, Blast_Score=118, Evalue=7e-27,
Organism=Drosophila melanogaster, GI281360297, Length=436, Percent_Identity=25.2293577981651, Blast_Score=118, Evalue=7e-27,
Organism=Drosophila melanogaster, GI281360295, Length=436, Percent_Identity=25.2293577981651, Blast_Score=118, Evalue=7e-27,
Organism=Drosophila melanogaster, GI24586250, Length=436, Percent_Identity=25.2293577981651, Blast_Score=118, Evalue=7e-27,
Organism=Drosophila melanogaster, GI281360301, Length=339, Percent_Identity=28.6135693215339, Blast_Score=118, Evalue=9e-27,
Organism=Drosophila melanogaster, GI28571806, Length=384, Percent_Identity=23.4375, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28571802, Length=384, Percent_Identity=23.4375, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28571800, Length=384, Percent_Identity=23.4375, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28571798, Length=384, Percent_Identity=23.4375, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28571796, Length=384, Percent_Identity=23.4375, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28571794, Length=384, Percent_Identity=23.4375, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28574525, Length=452, Percent_Identity=20.7964601769912, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 51302; Mature: 51302

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLNDMSLLRQQCYIDGQWLEAISGEKVEIADPATHRVIGSVPVMGTTETKAAISAAEKA
CCCCHHHHHHHHHCCCCHHHHHCCCCEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHH
LPAWRALTAKERGAKLNRWFELLLEHQDDLALMMTTEQGKPLAEAKGEVAYAASFIEWFA
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHHH
EEAKRVYGDTIPGHQGDKRLMVIKQSVGVTAAITPWNFPAAMITRKAAPALAAGCTMVVK
HHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCHHHHHHHCCCHHHHCCEEEEE
PAPQTPFTALALAELAERAGIPKGVFSVVTGDAIGIGNELCSNPVVRKLSFTGSTPVGIK
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHCCCHHEEEECCCCCCHHHH
LMQQCAPTLKKMSLELGGNAPFIVFNDADIDAAVEGAMIAKYRNAGQTCVCANRIYVQDA
HHHHHHHHHHHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECEEEEHHH
VYDEFAEKLAAAVAKLKVGVGTEEGVTTGPLINADAVAKVQRHLDDALSKGATLLAGGKL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCEE
ASAGGNFFEPTILTSVDKSMLVAKEETFGPLAPLFKFSDVDDVIAQANDTEFGLAAYFYG
ECCCCCCCCCHHHHHCCHHHEEECCCCCCCHHHHHHCCCHHHHHHCCCCCCCCEEEEEEC
RDISLVWKVSEALEYGMVGVNTGLISTEVAPFGGIKASGLGREGSKFGIEEYLEMKYICM
CCEEEEEEEHHHHHHCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
SV
CC
>Mature Secondary Structure
MQLNDMSLLRQQCYIDGQWLEAISGEKVEIADPATHRVIGSVPVMGTTETKAAISAAEKA
CCCCHHHHHHHHHCCCCHHHHHCCCCEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHH
LPAWRALTAKERGAKLNRWFELLLEHQDDLALMMTTEQGKPLAEAKGEVAYAASFIEWFA
HHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHCCCHHHHHHHHHHHH
EEAKRVYGDTIPGHQGDKRLMVIKQSVGVTAAITPWNFPAAMITRKAAPALAAGCTMVVK
HHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCHHHHHHHCCCHHHHCCEEEEE
PAPQTPFTALALAELAERAGIPKGVFSVVTGDAIGIGNELCSNPVVRKLSFTGSTPVGIK
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHCCCHHEEEECCCCCCHHHH
LMQQCAPTLKKMSLELGGNAPFIVFNDADIDAAVEGAMIAKYRNAGQTCVCANRIYVQDA
HHHHHHHHHHHHHHEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECEEEEHHH
VYDEFAEKLAAAVAKLKVGVGTEEGVTTGPLINADAVAKVQRHLDDALSKGATLLAGGKL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCEE
ASAGGNFFEPTILTSVDKSMLVAKEETFGPLAPLFKFSDVDDVIAQANDTEFGLAAYFYG
ECCCCCCCCCHHHHHCCHHHEEECCCCCCCHHHHHHCCCHHHHHHCCCCCCCCEEEEEEC
RDISLVWKVSEALEYGMVGVNTGLISTEVAPFGGIKASGLGREGSKFGIEEYLEMKYICM
CCEEEEEEEHHHHHHCCEEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
SV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]