| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is rhlE [H]
Identifier: 157960731
GI number: 157960731
Start: 1103801
End: 1105090
Strand: Direct
Name: rhlE [H]
Synonym: Spea_0903
Alternate gene names: 157960731
Gene position: 1103801-1105090 (Clockwise)
Preceding gene: 157960728
Following gene: 157960732
Centisome position: 21.33
GC content: 48.53
Gene sequence:
>1290_bases ATGCAATTGCCGTTATTAGCCCACATTATGAAATTTTCCGACCTTAATCTTTGTGCCGAAATCCTATCTAAACTACCCAG TAAGCTGATTGTCGCCACCGACATCCAACGACTTGCTATCCCTCAAATTTTAGCGGGCAAAGATCTGCTAGCGCTAGCAC AAACCGGCAGTGGTAAAACTTATGCCTTTGGTTTGCCACTGCTACAAAGCAATATCAATGGTAATAGTGACTCGGGAGAG GTTAAGGCGCTGGTGTTAGTGCCCACTCGCGAACTGGCACTGCAAGTCGGTGAGGCGCTAGAGTCTGTGTCTGATAGCAC TGGGATAATCGTATTGTGCGGTGGTGTAGATAAGGAAGAGCAGGTTAAAACGCTGCAGCAGGCAAGATTACAGTTAAAGC CACAACTTGTGGTGGCAACGCCTGGCAGGTTATTAGATCTGTTACGTGAGCAACAACTCTCACTTGAGTCGGTAAAACAG CTAGTACTCGATGAAGCGGATAGGTTGATGGAGATGGGCTTTTGGCCTGATCTTGAGCGCATACTCGAGTTTATCCCAAG CAAACGACAGACCATGTTATTTTCGGCGACGCTGGCACCAGAGCTAAACGAAAAGGCGCTTGGCTTGTTACGCGCGCCAG TTAAGGTTGAGGCGCACGCGGCTAATAGCGTGGTGACTGATATTAGCGAATCGCTTTACTTGGTCAATAAAGGCGATAAA GCCCGGGCGTTAATCGCACTTATTCAAAAGAATCAATGGTCACAGGTACTGGTGTTTATCAATGCAAAAGATGACGCCGA TAAACTTGCTAAGCGGTTAGTAAAGGCGGGCATCAATGCCGCCGCTTTGCACGGCGATAAAGAGCAACTTGATAGGCAGC AAACATTAGCCGACTTTAAAGCGCTTAAATTACCGGTTTTGGTCACCACAGATCTATTGTCTCGCGGTATTCATGTCGAC GCCCTGCCAGTTGTAATCAATCTGGATTTACCTAATAGCGCCCCGGTATATGTACACCGTATTGGCCGTACAGCTCGAGC CGGTGATAAGGGGTTAGCGATCTCACTGGTGTGTCATGGCGAAGCCGATAGCTTAAAGGCGATTCAACAGCTAACCGAGC GAGAGCTAAAGCTTGAGGCTCTCGAGGGGTTCGAAGTAACCGATAAGCCGTCATCGGGCGACAGTAAACGTGCTCCCCGT GATAAGAAAGCCAATCGACGCAGCCAGAGTAAGCGCAGCGCTAAAGATTTTGCCCCTAAACAGGCTGCTAAAAAGCCAAG ACGAACATAA
Upstream 100 bases:
>100_bases AAGCCTTCGTGTATCACTTATTATGATGCTGACTTTGAGTATCCTCTAGCCCCAACGTAAACAGTTCATTTTACTAATAG CGCCGCTATCGCTACACTCC
Downstream 100 bases:
>100_bases TAATTGTGATCAACGAGTGTGATGGTGTTCTGGGCCTAATTGCGTTAACTGGCATGGATAACGGAGAGATTAGATGGATC AGATAGGTGCGATGAAAGCG
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MQLPLLAHIMKFSDLNLCAEILSKLPSKLIVATDIQRLAIPQILAGKDLLALAQTGSGKTYAFGLPLLQSNINGNSDSGE VKALVLVPTRELALQVGEALESVSDSTGIIVLCGGVDKEEQVKTLQQARLQLKPQLVVATPGRLLDLLREQQLSLESVKQ LVLDEADRLMEMGFWPDLERILEFIPSKRQTMLFSATLAPELNEKALGLLRAPVKVEAHAANSVVTDISESLYLVNKGDK ARALIALIQKNQWSQVLVFINAKDDADKLAKRLVKAGINAAALHGDKEQLDRQQTLADFKALKLPVLVTTDLLSRGIHVD ALPVVINLDLPNSAPVYVHRIGRTARAGDKGLAISLVCHGEADSLKAIQQLTERELKLEALEGFEVTDKPSSGDSKRAPR DKKANRRSQSKRSAKDFAPKQAAKKPRRT
Sequences:
>Translated_429_residues MQLPLLAHIMKFSDLNLCAEILSKLPSKLIVATDIQRLAIPQILAGKDLLALAQTGSGKTYAFGLPLLQSNINGNSDSGE VKALVLVPTRELALQVGEALESVSDSTGIIVLCGGVDKEEQVKTLQQARLQLKPQLVVATPGRLLDLLREQQLSLESVKQ LVLDEADRLMEMGFWPDLERILEFIPSKRQTMLFSATLAPELNEKALGLLRAPVKVEAHAANSVVTDISESLYLVNKGDK ARALIALIQKNQWSQVLVFINAKDDADKLAKRLVKAGINAAALHGDKEQLDRQQTLADFKALKLPVLVTTDLLSRGIHVD ALPVVINLDLPNSAPVYVHRIGRTARAGDKGLAISLVCHGEADSLKAIQQLTERELKLEALEGFEVTDKPSSGDSKRAPR DKKANRRSQSKRSAKDFAPKQAAKKPRRT >Mature_429_residues MQLPLLAHIMKFSDLNLCAEILSKLPSKLIVATDIQRLAIPQILAGKDLLALAQTGSGKTYAFGLPLLQSNINGNSDSGE VKALVLVPTRELALQVGEALESVSDSTGIIVLCGGVDKEEQVKTLQQARLQLKPQLVVATPGRLLDLLREQQLSLESVKQ LVLDEADRLMEMGFWPDLERILEFIPSKRQTMLFSATLAPELNEKALGLLRAPVKVEAHAANSVVTDISESLYLVNKGDK ARALIALIQKNQWSQVLVFINAKDDADKLAKRLVKAGINAAALHGDKEQLDRQQTLADFKALKLPVLVTTDLLSRGIHVD ALPVVINLDLPNSAPVYVHRIGRTARAGDKGLAISLVCHGEADSLKAIQQLTERELKLEALEGFEVTDKPSSGDSKRAPR DKKANRRSQSKRSAKDFAPKQAAKKPRRT
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI262118318, Length=363, Percent_Identity=35.2617079889807, Blast_Score=223, Evalue=2e-58, Organism=Homo sapiens, GI216548263, Length=365, Percent_Identity=35.6164383561644, Blast_Score=222, Evalue=4e-58, Organism=Homo sapiens, GI13518015, Length=365, Percent_Identity=35.6164383561644, Blast_Score=222, Evalue=4e-58, Organism=Homo sapiens, GI262231852, Length=365, Percent_Identity=35.6164383561644, Blast_Score=222, Evalue=5e-58, Organism=Homo sapiens, GI301171467, Length=373, Percent_Identity=37.8016085790885, Blast_Score=221, Evalue=1e-57, Organism=Homo sapiens, GI87196351, Length=373, Percent_Identity=37.8016085790885, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI301171475, Length=373, Percent_Identity=37.8016085790885, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI41327771, Length=373, Percent_Identity=35.1206434316354, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI169881239, Length=373, Percent_Identity=37.5335120643432, Blast_Score=218, Evalue=7e-57, Organism=Homo sapiens, GI13514809, Length=373, Percent_Identity=37.5335120643432, Blast_Score=218, Evalue=7e-57, Organism=Homo sapiens, GI31542656, Length=365, Percent_Identity=39.1780821917808, Blast_Score=217, Evalue=2e-56, Organism=Homo sapiens, GI20149629, Length=347, Percent_Identity=35.7348703170029, Blast_Score=216, Evalue=2e-56, Organism=Homo sapiens, GI41327773, Length=349, Percent_Identity=36.676217765043, Blast_Score=214, Evalue=2e-55, Organism=Homo sapiens, GI21071032, Length=363, Percent_Identity=36.0881542699724, Blast_Score=212, Evalue=7e-55, Organism=Homo sapiens, GI224593278, Length=366, Percent_Identity=35.5191256830601, Blast_Score=209, Evalue=3e-54, Organism=Homo sapiens, GI148613856, Length=361, Percent_Identity=34.6260387811634, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI38201710, Length=361, Percent_Identity=34.6260387811634, Blast_Score=209, Evalue=4e-54, Organism=Homo sapiens, GI222352149, Length=384, Percent_Identity=34.1145833333333, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI4758138, Length=358, Percent_Identity=34.3575418994413, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI51094101, Length=372, Percent_Identity=36.0215053763441, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI164419743, Length=372, Percent_Identity=36.0215053763441, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI45446747, Length=358, Percent_Identity=32.4022346368715, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI45446743, Length=358, Percent_Identity=32.4022346368715, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI164664518, Length=346, Percent_Identity=33.8150289017341, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI7661920, Length=345, Percent_Identity=31.5942028985507, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI55749865, Length=336, Percent_Identity=34.8214285714286, Blast_Score=189, Evalue=6e-48, Organism=Homo sapiens, GI41327776, Length=347, Percent_Identity=33.7175792507205, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI188035877, Length=333, Percent_Identity=35.4354354354354, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI21040371, Length=330, Percent_Identity=32.4242424242424, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI38569505, Length=378, Percent_Identity=34.6560846560847, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI38569503, Length=378, Percent_Identity=34.6560846560847, Blast_Score=179, Evalue=3e-45, Organism=Homo sapiens, GI41327779, Length=345, Percent_Identity=35.0724637681159, Blast_Score=178, Evalue=9e-45, Organism=Homo sapiens, GI4758112, Length=330, Percent_Identity=30.9090909090909, Blast_Score=175, Evalue=8e-44, Organism=Homo sapiens, GI18375623, Length=330, Percent_Identity=30.9090909090909, Blast_Score=175, Evalue=8e-44, Organism=Homo sapiens, GI13514831, Length=380, Percent_Identity=31.8421052631579, Blast_Score=172, Evalue=6e-43, Organism=Homo sapiens, GI4503529, Length=364, Percent_Identity=32.6923076923077, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI83700235, Length=365, Percent_Identity=32.3287671232877, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI38327634, Length=354, Percent_Identity=30.5084745762712, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI50659095, Length=384, Percent_Identity=29.4270833333333, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI256223453, Length=376, Percent_Identity=30.8510638297872, Blast_Score=151, Evalue=1e-36, Organism=Homo sapiens, GI13129006, Length=382, Percent_Identity=29.5811518324607, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI9506931, Length=397, Percent_Identity=29.4710327455919, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI164419732, Length=351, Percent_Identity=31.3390313390313, Blast_Score=139, Evalue=4e-33, Organism=Homo sapiens, GI9966805, Length=319, Percent_Identity=31.974921630094, Blast_Score=139, Evalue=6e-33, Organism=Homo sapiens, GI62241022, Length=336, Percent_Identity=32.4404761904762, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI6005743, Length=370, Percent_Identity=31.6216216216216, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI62241024, Length=348, Percent_Identity=31.8965517241379, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI8922886, Length=370, Percent_Identity=31.6216216216216, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI256773275, Length=387, Percent_Identity=31.266149870801, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI4826686, Length=344, Percent_Identity=30.2325581395349, Blast_Score=122, Evalue=8e-28, Organism=Homo sapiens, GI154759257, Length=362, Percent_Identity=29.2817679558011, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI17505907, Length=217, Percent_Identity=35.9447004608295, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI20336298, Length=217, Percent_Identity=35.9447004608295, Blast_Score=105, Evalue=7e-23, Organism=Escherichia coli, GI1787016, Length=382, Percent_Identity=42.6701570680628, Blast_Score=281, Evalue=7e-77, Organism=Escherichia coli, GI87082221, Length=374, Percent_Identity=40.3743315508021, Blast_Score=238, Evalue=4e-64, Organism=Escherichia coli, GI1787605, Length=376, Percent_Identity=39.0957446808511, Blast_Score=230, Evalue=2e-61, Organism=Escherichia coli, GI1790214, Length=415, Percent_Identity=32.7710843373494, Blast_Score=199, Evalue=2e-52, Organism=Escherichia coli, GI1788930, Length=371, Percent_Identity=34.5013477088949, Blast_Score=192, Evalue=5e-50, Organism=Caenorhabditis elegans, GI17555296, Length=340, Percent_Identity=36.7647058823529, Blast_Score=223, Evalue=1e-58, Organism=Caenorhabditis elegans, GI115533224, Length=421, Percent_Identity=34.2042755344418, Blast_Score=219, Evalue=2e-57, Organism=Caenorhabditis elegans, GI86570094, Length=335, Percent_Identity=36.7164179104478, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI32565321, Length=360, Percent_Identity=34.7222222222222, Blast_Score=204, Evalue=7e-53, Organism=Caenorhabditis elegans, GI71999646, Length=333, Percent_Identity=37.8378378378378, Blast_Score=204, Evalue=7e-53, Organism=Caenorhabditis elegans, GI71999644, Length=333, Percent_Identity=37.8378378378378, Blast_Score=203, Evalue=1e-52, Organism=Caenorhabditis elegans, GI71995724, Length=345, Percent_Identity=33.6231884057971, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17510559, Length=388, Percent_Identity=34.5360824742268, Blast_Score=202, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17507121, Length=345, Percent_Identity=33.3333333333333, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI17507945, Length=342, Percent_Identity=35.672514619883, Blast_Score=201, Evalue=5e-52, Organism=Caenorhabditis elegans, GI17552114, Length=338, Percent_Identity=34.0236686390533, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17510307, Length=345, Percent_Identity=36.231884057971, Blast_Score=196, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17510309, Length=344, Percent_Identity=36.046511627907, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI71995514, Length=344, Percent_Identity=36.046511627907, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI115532548, Length=380, Percent_Identity=34.2105263157895, Blast_Score=194, Evalue=9e-50, Organism=Caenorhabditis elegans, GI115532546, Length=379, Percent_Identity=33.245382585752, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI71987143, Length=376, Percent_Identity=31.3829787234043, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI71995718, Length=368, Percent_Identity=36.1413043478261, Blast_Score=187, Evalue=9e-48, Organism=Caenorhabditis elegans, GI17552642, Length=360, Percent_Identity=35.5555555555556, Blast_Score=186, Evalue=3e-47, Organism=Caenorhabditis elegans, GI17507881, Length=366, Percent_Identity=33.6065573770492, Blast_Score=177, Evalue=7e-45, Organism=Caenorhabditis elegans, GI17509811, Length=382, Percent_Identity=32.7225130890052, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17537549, Length=359, Percent_Identity=34.5403899721448, Blast_Score=175, Evalue=3e-44, Organism=Caenorhabditis elegans, GI71982858, Length=372, Percent_Identity=30.6451612903226, Blast_Score=171, Evalue=5e-43, Organism=Caenorhabditis elegans, GI193208216, Length=355, Percent_Identity=34.9295774647887, Blast_Score=171, Evalue=7e-43, Organism=Caenorhabditis elegans, GI17507877, Length=351, Percent_Identity=32.7635327635328, Blast_Score=171, Evalue=7e-43, Organism=Caenorhabditis elegans, GI17507879, Length=374, Percent_Identity=31.5508021390374, Blast_Score=163, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17505370, Length=332, Percent_Identity=32.5301204819277, Blast_Score=161, Evalue=5e-40, Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=30.6590257879656, Blast_Score=157, Evalue=9e-39, Organism=Caenorhabditis elegans, GI32564046, Length=371, Percent_Identity=30.9973045822102, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17507641, Length=371, Percent_Identity=30.9973045822102, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17556951, Length=335, Percent_Identity=29.5522388059701, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17508543, Length=415, Percent_Identity=28.9156626506024, Blast_Score=140, Evalue=9e-34, Organism=Caenorhabditis elegans, GI71990816, Length=358, Percent_Identity=30.7262569832402, Blast_Score=137, Evalue=9e-33, Organism=Caenorhabditis elegans, GI17553716, Length=337, Percent_Identity=27.0029673590504, Blast_Score=133, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17536099, Length=395, Percent_Identity=29.1139240506329, Blast_Score=122, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17536101, Length=395, Percent_Identity=29.1139240506329, Blast_Score=122, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17536103, Length=396, Percent_Identity=29.2929292929293, Blast_Score=119, Evalue=3e-27, Organism=Caenorhabditis elegans, GI25148203, Length=405, Percent_Identity=25.9259259259259, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71997889, Length=362, Percent_Identity=28.4530386740331, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI25148291, Length=337, Percent_Identity=27.893175074184, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71982862, Length=201, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71987152, Length=89, Percent_Identity=44.9438202247191, Blast_Score=85, Evalue=8e-17, Organism=Saccharomyces cerevisiae, GI6321360, Length=372, Percent_Identity=41.6666666666667, Blast_Score=238, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6321856, Length=405, Percent_Identity=36.0493827160494, Blast_Score=228, Evalue=2e-60, Organism=Saccharomyces cerevisiae, GI6324217, Length=335, Percent_Identity=37.3134328358209, Blast_Score=212, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6323021, Length=362, Percent_Identity=34.8066298342541, Blast_Score=207, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6325138, Length=357, Percent_Identity=35.8543417366947, Blast_Score=206, Evalue=5e-54, Organism=Saccharomyces cerevisiae, GI6324778, Length=400, Percent_Identity=33, Blast_Score=204, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6320224, Length=366, Percent_Identity=33.0601092896175, Blast_Score=199, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6320041, Length=362, Percent_Identity=33.1491712707182, Blast_Score=198, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6320173, Length=411, Percent_Identity=33.0900243309002, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6319714, Length=386, Percent_Identity=31.8652849740933, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6320449, Length=363, Percent_Identity=33.8842975206612, Blast_Score=174, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6323947, Length=363, Percent_Identity=32.2314049586777, Blast_Score=174, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6320119, Length=340, Percent_Identity=32.3529411764706, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6324620, Length=373, Percent_Identity=32.9758713136729, Blast_Score=171, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6321963, Length=380, Percent_Identity=33.4210526315789, Blast_Score=169, Evalue=7e-43, Organism=Saccharomyces cerevisiae, GI6321111, Length=370, Percent_Identity=30, Blast_Score=164, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6322427, Length=371, Percent_Identity=32.0754716981132, Blast_Score=158, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6322912, Length=379, Percent_Identity=29.8153034300792, Blast_Score=152, Evalue=7e-38, Organism=Saccharomyces cerevisiae, GI6322323, Length=379, Percent_Identity=29.8153034300792, Blast_Score=152, Evalue=7e-38, Organism=Saccharomyces cerevisiae, GI6319618, Length=395, Percent_Identity=29.873417721519, Blast_Score=151, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6321267, Length=414, Percent_Identity=31.6425120772947, Blast_Score=148, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6320400, Length=412, Percent_Identity=29.8543689320388, Blast_Score=147, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6322876, Length=434, Percent_Identity=29.4930875576037, Blast_Score=130, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6324366, Length=369, Percent_Identity=28.9972899728997, Blast_Score=123, Evalue=5e-29, Organism=Saccharomyces cerevisiae, GI6323306, Length=295, Percent_Identity=31.5254237288136, Blast_Score=108, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6321374, Length=443, Percent_Identity=23.2505643340858, Blast_Score=90, Evalue=8e-19, Organism=Drosophila melanogaster, GI24585582, Length=372, Percent_Identity=38.4408602150538, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24584994, Length=365, Percent_Identity=37.2602739726027, Blast_Score=223, Evalue=2e-58, Organism=Drosophila melanogaster, GI24642151, Length=333, Percent_Identity=36.9369369369369, Blast_Score=221, Evalue=7e-58, Organism=Drosophila melanogaster, GI24584399, Length=356, Percent_Identity=35.9550561797753, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI17985987, Length=376, Percent_Identity=34.5744680851064, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24662330, Length=335, Percent_Identity=36.1194029850746, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI28574962, Length=347, Percent_Identity=34.8703170028818, Blast_Score=200, Evalue=1e-51, Organism=Drosophila melanogaster, GI17977678, Length=364, Percent_Identity=34.6153846153846, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI21355075, Length=365, Percent_Identity=33.972602739726, Blast_Score=197, Evalue=9e-51, Organism=Drosophila melanogaster, GI24644479, Length=373, Percent_Identity=32.7077747989276, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI24644483, Length=373, Percent_Identity=32.7077747989276, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI281361218, Length=373, Percent_Identity=32.7077747989276, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI24644481, Length=373, Percent_Identity=32.7077747989276, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI24644487, Length=373, Percent_Identity=32.7077747989276, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI45551833, Length=373, Percent_Identity=32.7077747989276, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI24644485, Length=373, Percent_Identity=32.7077747989276, Blast_Score=196, Evalue=2e-50, Organism=Drosophila melanogaster, GI28575014, Length=352, Percent_Identity=34.9431818181818, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI21356161, Length=381, Percent_Identity=34.3832020997375, Blast_Score=194, Evalue=8e-50, Organism=Drosophila melanogaster, GI24645031, Length=369, Percent_Identity=31.4363143631436, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI18857967, Length=376, Percent_Identity=34.3085106382979, Blast_Score=192, Evalue=4e-49, Organism=Drosophila melanogaster, GI24583281, Length=345, Percent_Identity=34.4927536231884, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24583279, Length=345, Percent_Identity=34.4927536231884, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI17136814, Length=334, Percent_Identity=34.4311377245509, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI24666101, Length=343, Percent_Identity=33.8192419825073, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24582080, Length=365, Percent_Identity=32.0547945205479, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24582078, Length=365, Percent_Identity=32.0547945205479, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI17136248, Length=365, Percent_Identity=32.0547945205479, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24582075, Length=365, Percent_Identity=32.0547945205479, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI24581954, Length=356, Percent_Identity=30.3370786516854, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI24581952, Length=356, Percent_Identity=30.3370786516854, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI24581956, Length=356, Percent_Identity=30.3370786516854, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI17647335, Length=365, Percent_Identity=28.7671232876712, Blast_Score=161, Evalue=9e-40, Organism=Drosophila melanogaster, GI24642822, Length=385, Percent_Identity=33.2467532467532, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI281365720, Length=293, Percent_Identity=33.7883959044369, Blast_Score=155, Evalue=5e-38, Organism=Drosophila melanogaster, GI24643725, Length=396, Percent_Identity=30.050505050505, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI21355559, Length=350, Percent_Identity=34.2857142857143, Blast_Score=151, Evalue=7e-37, Organism=Drosophila melanogaster, GI28571808, Length=336, Percent_Identity=30.3571428571429, Blast_Score=151, Evalue=8e-37, Organism=Drosophila melanogaster, GI28571809, Length=336, Percent_Identity=30.3571428571429, Blast_Score=151, Evalue=8e-37, Organism=Drosophila melanogaster, GI20130173, Length=457, Percent_Identity=29.1028446389497, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI17136666, Length=406, Percent_Identity=29.5566502463054, Blast_Score=135, Evalue=7e-32, Organism=Drosophila melanogaster, GI24668515, Length=330, Percent_Identity=29.0909090909091, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI19920478, Length=353, Percent_Identity=29.1784702549575, Blast_Score=118, Evalue=7e-27, Organism=Drosophila melanogaster, GI28571338, Length=203, Percent_Identity=36.9458128078818, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI18859659, Length=203, Percent_Identity=36.9458128078818, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24640164, Length=313, Percent_Identity=22.6837060702875, Blast_Score=76, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 46821; Mature: 46821
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLPLLAHIMKFSDLNLCAEILSKLPSKLIVATDIQRLAIPQILAGKDLLALAQTGSGKT CCCHHHHHHHHHCCHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCE YAFGLPLLQSNINGNSDSGEVKALVLVPTRELALQVGEALESVSDSTGIIVLCGGVDKEE EEEECHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHH QVKTLQQARLQLKPQLVVATPGRLLDLLREQQLSLESVKQLVLDEADRLMEMGFWPDLER HHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHH ILEFIPSKRQTMLFSATLAPELNEKALGLLRAPVKVEAHAANSVVTDISESLYLVNKGDK HHHHCCCCCCEEEEEEECCCCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHCEEEEECCCH ARALIALIQKNQWSQVLVFINAKDDADKLAKRLVKAGINAAALHGDKEQLDRQQTLADFK HHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHH ALKLPVLVTTDLLSRGIHVDALPVVINLDLPNSAPVYVHRIGRTARAGDKGLAISLVCHG HHHCCCEEEHHHHHCCCCEEEEEEEEEECCCCCCCEEEEECCCHHCCCCCCCEEEEEECC EADSLKAIQQLTERELKLEALEGFEVTDKPSSGDSKRAPRDKKANRRSQSKRSAKDFAPK CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH QAAKKPRRT HHHCCCCCC >Mature Secondary Structure MQLPLLAHIMKFSDLNLCAEILSKLPSKLIVATDIQRLAIPQILAGKDLLALAQTGSGKT CCCHHHHHHHHHCCHHHHHHHHHHCCHHEEEHHHHHHHHHHHHHCCCCEEEEEECCCCCE YAFGLPLLQSNINGNSDSGEVKALVLVPTRELALQVGEALESVSDSTGIIVLCGGVDKEE EEEECHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHH QVKTLQQARLQLKPQLVVATPGRLLDLLREQQLSLESVKQLVLDEADRLMEMGFWPDLER HHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHH ILEFIPSKRQTMLFSATLAPELNEKALGLLRAPVKVEAHAANSVVTDISESLYLVNKGDK HHHHCCCCCCEEEEEEECCCCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHCEEEEECCCH ARALIALIQKNQWSQVLVFINAKDDADKLAKRLVKAGINAAALHGDKEQLDRQQTLADFK HHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHH ALKLPVLVTTDLLSRGIHVDALPVVINLDLPNSAPVYVHRIGRTARAGDKGLAISLVCHG HHHCCCEEEHHHHHCCCCEEEEEEEEEECCCCCCCEEEEECCCHHCCCCCCCEEEEEECC EADSLKAIQQLTERELKLEALEGFEVTDKPSSGDSKRAPRDKKANRRSQSKRSAKDFAPK CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH QAAKKPRRT HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]