Click here to switch to the map view.

The map label for this gene is yaaH [H]

Identifier: 157960718

GI number: 157960718

Start: 1086771

End: 1087370

Strand: Direct

Name: yaaH [H]

Synonym: Spea_0890

Alternate gene names: 157960718

Gene position: 1086771-1087370 (Clockwise)

Preceding gene: 157960717

Following gene: 157960722

Centisome position: 21.0

GC content: 44.5

Gene sequence:

>600_bases
ATGTCTACACAACTAGCTAATCCTGCTCCATTAGGTCTAATGGGATTCGGTATGACAACTGTCTTACTAAACATCCATAA
CGCAGGTTTTTTCCCAATTGACTCTATGATTTTGGCAATGGGAATTTTCTACGGCGGTATCGCTCAGGTTATCGTTGGTA
TCATGTGCTTTAAGCGTGGTGATACTTTCGGTACAACTGCATTTACTTCTTACGGTTTATTCTGGCTAACCCTAGTAGGC
CTGTTGGTTATGCCTAAGATGGGCTTTGCTGCAAGCCCAGCCACTTTCATGGGTTGGTACTTGCTACTATGGGGCATGTT
TACTGCTGCTCTTTTTGTTGGTTCACTACGTTACCCACGTGCTAAGCAAGTTGTGTTTGCATCGTTAACGATTCTATTCT
TCCTACTTGCTGCGCGTGATTTCACAGGTAGTGAGTTGATCGGCACTATCGCTGGCTACGAAGGTATTTTCTGTGGTTTA
AGCGCGATTTACTTTGCTATGGCACAAGTATTGAACGCTGAGTTTGGTCGCGTTATTTTACCAGTTGGTCCTGTTGCAGT
TGCAGCATACGAGCCAGCAGCAGAAAAACAAGCCGCTTAA

Upstream 100 bases:

>100_bases
ATGCTTCCACTAGAATGCGCGCGCTCAAATTAACTTAATTTAATAATGCGCTTTGTAATAGGGTGCATTTGTTAGTGAAT
ACTTCCTGTAGGGGAACTCA

Downstream 100 bases:

>100_bases
GTTACCCACCAATTATCACTATTTATCTCCGATAATGTGTAAATGAAGCGAAAAAAAAGCTGACCTACTAAGGTCAGCTT
TTTTGTATCTGTAATTGTGA

Product: GPR1/FUN34/yaaH family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MSTQLANPAPLGLMGFGMTTVLLNIHNAGFFPIDSMILAMGIFYGGIAQVIVGIMCFKRGDTFGTTAFTSYGLFWLTLVG
LLVMPKMGFAASPATFMGWYLLLWGMFTAALFVGSLRYPRAKQVVFASLTILFFLLAARDFTGSELIGTIAGYEGIFCGL
SAIYFAMAQVLNAEFGRVILPVGPVAVAAYEPAAEKQAA

Sequences:

>Translated_199_residues
MSTQLANPAPLGLMGFGMTTVLLNIHNAGFFPIDSMILAMGIFYGGIAQVIVGIMCFKRGDTFGTTAFTSYGLFWLTLVG
LLVMPKMGFAASPATFMGWYLLLWGMFTAALFVGSLRYPRAKQVVFASLTILFFLLAARDFTGSELIGTIAGYEGIFCGL
SAIYFAMAQVLNAEFGRVILPVGPVAVAAYEPAAEKQAA
>Mature_198_residues
STQLANPAPLGLMGFGMTTVLLNIHNAGFFPIDSMILAMGIFYGGIAQVIVGIMCFKRGDTFGTTAFTSYGLFWLTLVGL
LVMPKMGFAASPATFMGWYLLLWGMFTAALFVGSLRYPRAKQVVFASLTILFFLLAARDFTGSELIGTIAGYEGIFCGLS
AIYFAMAQVLNAEFGRVILPVGPVAVAAYEPAAEKQAA

Specific function: Unknown

COG id: COG1584

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GPR1/FUN34/yaaH family [H]

Homologues:

Organism=Escherichia coli, GI1786191, Length=184, Percent_Identity=59.7826086956522, Blast_Score=218, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6324329, Length=202, Percent_Identity=32.1782178217822, Blast_Score=80, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6319855, Length=123, Percent_Identity=35.7723577235772, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000791 [H]

Pfam domain/function: PF01184 Grp1_Fun34_YaaH [H]

EC number: NA

Molecular weight: Translated: 21276; Mature: 21144

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: PS01114 GPR1_FUN34_YAAH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTQLANPAPLGLMGFGMTTVLLNIHNAGFFPIDSMILAMGIFYGGIAQVIVGIMCFKRG
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DTFGTTAFTSYGLFWLTLVGLLVMPKMGFAASPATFMGWYLLLWGMFTAALFVGSLRYPR
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
AKQVVFASLTILFFLLAARDFTGSELIGTIAGYEGIFCGLSAIYFAMAQVLNAEFGRVIL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE
PVGPVAVAAYEPAAEKQAA
ECCCCHHEECCCCHHCCCC
>Mature Secondary Structure 
STQLANPAPLGLMGFGMTTVLLNIHNAGFFPIDSMILAMGIFYGGIAQVIVGIMCFKRG
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DTFGTTAFTSYGLFWLTLVGLLVMPKMGFAASPATFMGWYLLLWGMFTAALFVGSLRYPR
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
AKQVVFASLTILFFLLAARDFTGSELIGTIAGYEGIFCGLSAIYFAMAQVLNAEFGRVIL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE
PVGPVAVAAYEPAAEKQAA
ECCCCHHEECCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]