Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157960707

Identifier: 157960707

GI number: 157960707

Start: 1077908

End: 1078291

Strand: Reverse

Name: 157960707

Synonym: Spea_0879

Alternate gene names: NA

Gene position: 1078291-1077908 (Counterclockwise)

Preceding gene: 157960708

Following gene: 157960706

Centisome position: 20.84

GC content: 41.15

Gene sequence:

>384_bases
ATGCTTCTAGGCTCAATTGTGAGTGCATCTGCTGCTGCAATAGATAACGCAGAGGCTTTAGAGCCGAGCCTCAAACTGTC
CCCTGAGATCTGTATCACATCGGAAGATGGCCAGTCCTGTGATATTGAAGTCACTTTAGAATGGCAATTGTTAACAAATC
AAACAGTTTGCATCATTTCCGATTACAATGAATTAAAAAAATGGTGTAGTCCCTCACCAGATATTCACTCTTTAACCATT
AATATCAGAGCAGATCGTGATATTCAGTTTGTGATGATAGACAAAGATACCCACGAGACACTTGCAGGTGTAAAATTAAA
AGTTACACCCGCTTCTTCGCCTCAAGTTAGGCGACGATATCGCAACCCATGGAGCTTATTCTAA

Upstream 100 bases:

>100_bases
AGCCCACTTGTAGATAAAGATTACACAAGCACCTATTTTGTTGGCGCAGCGTATAGGTTCTAAGCGAGTGTTTTCAAAAT
TAAAACTGATACTTTGTTGG

Downstream 100 bases:

>100_bases
TGACCAACTCTCAATCTACGCATAGAGTTTTGTTAGTTGAAGATGATATTCGTTTGGCCAATTTGATTGTCGATTTCCTA
AAATCACATGGCATGCACGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MLLGSIVSASAAAIDNAEALEPSLKLSPEICITSEDGQSCDIEVTLEWQLLTNQTVCIISDYNELKKWCSPSPDIHSLTI
NIRADRDIQFVMIDKDTHETLAGVKLKVTPASSPQVRRRYRNPWSLF

Sequences:

>Translated_127_residues
MLLGSIVSASAAAIDNAEALEPSLKLSPEICITSEDGQSCDIEVTLEWQLLTNQTVCIISDYNELKKWCSPSPDIHSLTI
NIRADRDIQFVMIDKDTHETLAGVKLKVTPASSPQVRRRYRNPWSLF
>Mature_127_residues
MLLGSIVSASAAAIDNAEALEPSLKLSPEICITSEDGQSCDIEVTLEWQLLTNQTVCIISDYNELKKWCSPSPDIHSLTI
NIRADRDIQFVMIDKDTHETLAGVKLKVTPASSPQVRRRYRNPWSLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14174; Mature: 14174

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLGSIVSASAAAIDNAEALEPSLKLSPEICITSEDGQSCDIEVTLEWQLLTNQTVCIIS
CCCCCCCCCCHHCCCCCHHCCCCCCCCCCEEEECCCCCCEEEEEEEEEEEECCCEEEEEE
DYNELKKWCSPSPDIHSLTINIRADRDIQFVMIDKDTHETLAGVKLKVTPASSPQVRRRY
CCHHHHHHCCCCCCEEEEEEEEEECCCEEEEEEECCCCHHHCCEEEEEECCCCHHHHHHH
RNPWSLF
CCCCCCC
>Mature Secondary Structure
MLLGSIVSASAAAIDNAEALEPSLKLSPEICITSEDGQSCDIEVTLEWQLLTNQTVCIIS
CCCCCCCCCCHHCCCCCHHCCCCCCCCCCEEEECCCCCCEEEEEEEEEEEECCCEEEEEE
DYNELKKWCSPSPDIHSLTINIRADRDIQFVMIDKDTHETLAGVKLKVTPASSPQVRRRY
CCHHHHHHCCCCCCEEEEEEEEEECCCEEEEEEECCCCHHHCCEEEEEECCCCHHHHHHH
RNPWSLF
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA