| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157960707
Identifier: 157960707
GI number: 157960707
Start: 1077908
End: 1078291
Strand: Reverse
Name: 157960707
Synonym: Spea_0879
Alternate gene names: NA
Gene position: 1078291-1077908 (Counterclockwise)
Preceding gene: 157960708
Following gene: 157960706
Centisome position: 20.84
GC content: 41.15
Gene sequence:
>384_bases ATGCTTCTAGGCTCAATTGTGAGTGCATCTGCTGCTGCAATAGATAACGCAGAGGCTTTAGAGCCGAGCCTCAAACTGTC CCCTGAGATCTGTATCACATCGGAAGATGGCCAGTCCTGTGATATTGAAGTCACTTTAGAATGGCAATTGTTAACAAATC AAACAGTTTGCATCATTTCCGATTACAATGAATTAAAAAAATGGTGTAGTCCCTCACCAGATATTCACTCTTTAACCATT AATATCAGAGCAGATCGTGATATTCAGTTTGTGATGATAGACAAAGATACCCACGAGACACTTGCAGGTGTAAAATTAAA AGTTACACCCGCTTCTTCGCCTCAAGTTAGGCGACGATATCGCAACCCATGGAGCTTATTCTAA
Upstream 100 bases:
>100_bases AGCCCACTTGTAGATAAAGATTACACAAGCACCTATTTTGTTGGCGCAGCGTATAGGTTCTAAGCGAGTGTTTTCAAAAT TAAAACTGATACTTTGTTGG
Downstream 100 bases:
>100_bases TGACCAACTCTCAATCTACGCATAGAGTTTTGTTAGTTGAAGATGATATTCGTTTGGCCAATTTGATTGTCGATTTCCTA AAATCACATGGCATGCACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MLLGSIVSASAAAIDNAEALEPSLKLSPEICITSEDGQSCDIEVTLEWQLLTNQTVCIISDYNELKKWCSPSPDIHSLTI NIRADRDIQFVMIDKDTHETLAGVKLKVTPASSPQVRRRYRNPWSLF
Sequences:
>Translated_127_residues MLLGSIVSASAAAIDNAEALEPSLKLSPEICITSEDGQSCDIEVTLEWQLLTNQTVCIISDYNELKKWCSPSPDIHSLTI NIRADRDIQFVMIDKDTHETLAGVKLKVTPASSPQVRRRYRNPWSLF >Mature_127_residues MLLGSIVSASAAAIDNAEALEPSLKLSPEICITSEDGQSCDIEVTLEWQLLTNQTVCIISDYNELKKWCSPSPDIHSLTI NIRADRDIQFVMIDKDTHETLAGVKLKVTPASSPQVRRRYRNPWSLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14174; Mature: 14174
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLGSIVSASAAAIDNAEALEPSLKLSPEICITSEDGQSCDIEVTLEWQLLTNQTVCIIS CCCCCCCCCCHHCCCCCHHCCCCCCCCCCEEEECCCCCCEEEEEEEEEEEECCCEEEEEE DYNELKKWCSPSPDIHSLTINIRADRDIQFVMIDKDTHETLAGVKLKVTPASSPQVRRRY CCHHHHHHCCCCCCEEEEEEEEEECCCEEEEEEECCCCHHHCCEEEEEECCCCHHHHHHH RNPWSLF CCCCCCC >Mature Secondary Structure MLLGSIVSASAAAIDNAEALEPSLKLSPEICITSEDGQSCDIEVTLEWQLLTNQTVCIIS CCCCCCCCCCHHCCCCCHHCCCCCCCCCCEEEECCCCCCEEEEEEEEEEEECCCEEEEEE DYNELKKWCSPSPDIHSLTINIRADRDIQFVMIDKDTHETLAGVKLKVTPASSPQVRRRY CCHHHHHHCCCCCCEEEEEEEEEECCCEEEEEEECCCCHHHCCEEEEEECCCCHHHHHHH RNPWSLF CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA