Click here to switch to the map view.

The map label for this gene is dadA [H]

Identifier: 157960641

GI number: 157960641

Start: 1009716

End: 1011041

Strand: Reverse

Name: dadA [H]

Synonym: Spea_0813

Alternate gene names: 157960641

Gene position: 1011041-1009716 (Counterclockwise)

Preceding gene: 157960642

Following gene: 157960636

Centisome position: 19.54

GC content: 48.27

Gene sequence:

>1326_bases
ATGATGGATAAGCAGATGAACAAGGCTCCCAAGGATCTTGCTGTGAAGGATGTTGCTGTGATTGGTGGCGGCATTATCGG
AATTTGCACTGCCTATTATCTAAATAAGGCAGGTAAGTCTGTGGTGGTTATCGACAAAGATGAGATAGGCAAGGCCTGCT
CCTTTGGTAACGCGGGTTACATCACCCCGAGTCACTTCATTCCGCTAGCTGCGCCGGGCATGATCCAAAAAGGCCTAAAG
TGGATGCTCAATCCACAGAGCCCATTCTATGTACGTCCAAGCCTTAATATCGACTTCTTAAAATGGCTATTATCTTTTGC
TAAAAAGTGCACGCCGCAGCATACCTTAGCCAGTCAACAGGCGATTTTAGATATCAACCTTAAGTCTCTTGAGCTGTATC
AGATACTCCACCAAGTGCCAGAATTAGATTTTGAGTTTCATCAAAACGGGCTCTTGATGCTGTGTAACACAGAGCAAGGC
CTAAACGACGAGGCAACCACTGTGTGCCAAGCCAACAAGCTCGGATTGAAAGCCAAGATGCTCACTCCCCAAACCTTAAG
AGAACTAGAGCCCAATATTAAACTCGATGTCATGGGCGCTAGCTTTTACCCAGAAGATGCCCATATCGCCCCCTATGAGT
TTATTATGGCGATGAAAAACTACTTAGCCGCTCAAGGAGTGGAGTTTAGGGAACGCACTGAGATAACAGGCTTCACAACC
GATACCGTTACTCAAAAAATCAGTGGAGCAACAACCGCAAATGCTGAGATTAACGCCGATGAATTTGTCCTCGCCAACGG
CGCTTGGTCGCCCAAGCTTGCCAAACAGCTGGGGCTTAACCTGCCAGTACAATCGGGCAAAGGGATCTGTGTTAGCTTCG
ACAAGCCGCCCGTCAAAGAGGGCACCAAGCTTAAGTGCCGCACCCCGTTTATCTTAAGTGAAGCCAAAGTGGCGGTAAGC
CCGTTAGATAAGAGCATTCGATTTGGCGGCACCATGGAGCTCGGTGTGTTATCTAGCCAAGAGTCACTTGGCATCAGTCA
GAACCGGATCAAGGGTCTAACCAAATCCGCAGCCCGCTATTTACCCGACTTAGATACAGCTCAGGTTAAATCAGAAGAGT
TTTGGTCAGGCTTTCGCCCCTGCAGCCCAGATGGCCTACCGATTATTGGCAGAGTTCCTCAGTTAGCGAATCTAACCATA
GCCACAGGGCACGCCATGATGGGACTCAGTCTTGGCCCAATAACGGGGAAACTTGTCAGTGAACTCATATCCAATGAGGA
AACCTGTTTGGATCTCACACCTTTTTCACCTAGTCGGTTTGACTAA

Upstream 100 bases:

>100_bases
TCATCTTGGCTCTGTTTATTAACAACACTTGATTTAGAACAAACTAGATTCATCTCAGCGCTGTAGGTTATCCCATAAAA
CCCGCGCCCAAGGAAAGAAG

Downstream 100 bases:

>100_bases
AAACTGGGGTTTAGGATTGCGACCTAAGTTTCGCTTTGGTACTCAAACTTCGTTTGAGCGTAGAGTTAGACTGCATCTAA
CAAGTTTTGAGTAATCAAAC

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MMDKQMNKAPKDLAVKDVAVIGGGIIGICTAYYLNKAGKSVVVIDKDEIGKACSFGNAGYITPSHFIPLAAPGMIQKGLK
WMLNPQSPFYVRPSLNIDFLKWLLSFAKKCTPQHTLASQQAILDINLKSLELYQILHQVPELDFEFHQNGLLMLCNTEQG
LNDEATTVCQANKLGLKAKMLTPQTLRELEPNIKLDVMGASFYPEDAHIAPYEFIMAMKNYLAAQGVEFRERTEITGFTT
DTVTQKISGATTANAEINADEFVLANGAWSPKLAKQLGLNLPVQSGKGICVSFDKPPVKEGTKLKCRTPFILSEAKVAVS
PLDKSIRFGGTMELGVLSSQESLGISQNRIKGLTKSAARYLPDLDTAQVKSEEFWSGFRPCSPDGLPIIGRVPQLANLTI
ATGHAMMGLSLGPITGKLVSELISNEETCLDLTPFSPSRFD

Sequences:

>Translated_441_residues
MMDKQMNKAPKDLAVKDVAVIGGGIIGICTAYYLNKAGKSVVVIDKDEIGKACSFGNAGYITPSHFIPLAAPGMIQKGLK
WMLNPQSPFYVRPSLNIDFLKWLLSFAKKCTPQHTLASQQAILDINLKSLELYQILHQVPELDFEFHQNGLLMLCNTEQG
LNDEATTVCQANKLGLKAKMLTPQTLRELEPNIKLDVMGASFYPEDAHIAPYEFIMAMKNYLAAQGVEFRERTEITGFTT
DTVTQKISGATTANAEINADEFVLANGAWSPKLAKQLGLNLPVQSGKGICVSFDKPPVKEGTKLKCRTPFILSEAKVAVS
PLDKSIRFGGTMELGVLSSQESLGISQNRIKGLTKSAARYLPDLDTAQVKSEEFWSGFRPCSPDGLPIIGRVPQLANLTI
ATGHAMMGLSLGPITGKLVSELISNEETCLDLTPFSPSRFD
>Mature_441_residues
MMDKQMNKAPKDLAVKDVAVIGGGIIGICTAYYLNKAGKSVVVIDKDEIGKACSFGNAGYITPSHFIPLAAPGMIQKGLK
WMLNPQSPFYVRPSLNIDFLKWLLSFAKKCTPQHTLASQQAILDINLKSLELYQILHQVPELDFEFHQNGLLMLCNTEQG
LNDEATTVCQANKLGLKAKMLTPQTLRELEPNIKLDVMGASFYPEDAHIAPYEFIMAMKNYLAAQGVEFRERTEITGFTT
DTVTQKISGATTANAEINADEFVLANGAWSPKLAKQLGLNLPVQSGKGICVSFDKPPVKEGTKLKCRTPFILSEAKVAVS
PLDKSIRFGGTMELGVLSSQESLGISQNRIKGLTKSAARYLPDLDTAQVKSEEFWSGFRPCSPDGLPIIGRVPQLANLTI
ATGHAMMGLSLGPITGKLVSELISNEETCLDLTPFSPSRFD

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=429, Percent_Identity=28.4382284382284, Blast_Score=174, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 48060; Mature: 48060

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDKQMNKAPKDLAVKDVAVIGGGIIGICTAYYLNKAGKSVVVIDKDEIGKACSFGNAGY
CCCCHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEHHHCCCHHCCCCCCC
ITPSHFIPLAAPGMIQKGLKWMLNPQSPFYVRPSLNIDFLKWLLSFAKKCTPQHTLASQQ
CCCCCCCCCCCCHHHHHCHHEEECCCCCEEECCCCCHHHHHHHHHHHHHCCCCHHHHCCC
AILDINLKSLELYQILHQVPELDFEFHQNGLLMLCNTEQGLNDEATTVCQANKLGLKAKM
EEEEECCHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCCCHHHHEEECCCCCCEEEE
LTPQTLRELEPNIKLDVMGASFYPEDAHIAPYEFIMAMKNYLAAQGVEFRERTEITGFTT
CCHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCH
DTVTQKISGATTANAEINADEFVLANGAWSPKLAKQLGLNLPVQSGKGICVSFDKPPVKE
HHHHHHHCCCEECCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCC
GTKLKCRTPFILSEAKVAVSPLDKSIRFGGTMELGVLSSQESLGISQNRIKGLTKSAARY
CCEEEECCCEEECCCEEEECCCCCCCCCCCEEEEEEECCCHHCCCCHHHHHHHHHHHHHH
LPDLDTAQVKSEEFWSGFRPCSPDGLPIIGRVPQLANLTIATGHAMMGLSLGPITGKLVS
CCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHCEEEEECCEEECCEECCCHHHHHH
ELISNEETCLDLTPFSPSRFD
HHHCCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MMDKQMNKAPKDLAVKDVAVIGGGIIGICTAYYLNKAGKSVVVIDKDEIGKACSFGNAGY
CCCCHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEEHHHCCCHHCCCCCCC
ITPSHFIPLAAPGMIQKGLKWMLNPQSPFYVRPSLNIDFLKWLLSFAKKCTPQHTLASQQ
CCCCCCCCCCCCHHHHHCHHEEECCCCCEEECCCCCHHHHHHHHHHHHHCCCCHHHHCCC
AILDINLKSLELYQILHQVPELDFEFHQNGLLMLCNTEQGLNDEATTVCQANKLGLKAKM
EEEEECCHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCCCCCHHHHEEECCCCCCEEEE
LTPQTLRELEPNIKLDVMGASFYPEDAHIAPYEFIMAMKNYLAAQGVEFRERTEITGFTT
CCHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCH
DTVTQKISGATTANAEINADEFVLANGAWSPKLAKQLGLNLPVQSGKGICVSFDKPPVKE
HHHHHHHCCCEECCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCC
GTKLKCRTPFILSEAKVAVSPLDKSIRFGGTMELGVLSSQESLGISQNRIKGLTKSAARY
CCEEEECCCEEECCCEEEECCCCCCCCCCCEEEEEEECCCHHCCCCHHHHHHHHHHHHHH
LPDLDTAQVKSEEFWSGFRPCSPDGLPIIGRVPQLANLTIATGHAMMGLSLGPITGKLVS
CCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCHHCEEEEECCEEECCEECCCHHHHHH
ELISNEETCLDLTPFSPSRFD
HHHCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA