| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960497
Identifier: 157960497
GI number: 157960497
Start: 828340
End: 829530
Strand: Reverse
Name: 157960497
Synonym: Spea_0669
Alternate gene names: NA
Gene position: 829530-828340 (Counterclockwise)
Preceding gene: 157960503
Following gene: 157960496
Centisome position: 16.03
GC content: 48.61
Gene sequence:
>1191_bases ATGAAGAATGACCCACAAAAACTCCTCCTATGGATGACATTTATCATGTCCTTGGTTTTTGCCGTATGGCAGGCGCTGCT GAATAACTTTGTCATCGAGCGCGCACAATTTACCGGCGCTGAAATAGGTATGCTGCAGAGTCTGCGAGAGGTGCCCGGCT TTCTCGCCTTTACCGCCGTTTTTGTATTACTACTTGTGCGTGAGCAAGCCTTTGCCCTGCTCTCCCTAGCTGTCTTGTGT ATCGGCGTGGCAATAACCGGTTTTTTTCCACAAGTGTTAGGGCTATATATCACCACGGTATTGATGTCTGTCGGCTTTCA TTACTTTGAAACCGTCAACCAGTCACTGACACTACAGTGGGTCGATAAAAAGGATACCCCAGCATTCTTAGGGCGCGCCT TAGCATGGCGTAGTGCGGCGGCTCTAGGCGGCTATGCCAGTATCTGGCTCATCATGAGCTGGCTAAAACTCGATTACCAA TGGATGTACGCCATTATCGGCAGCCTTGGGTTACTCATGGTGTTCAGTGTTTGGCGGTATTTCCCCAACTTCAGTCAGGG CGAGGTTCAACATAAGAAGCTACTGCTGAGAAAGCGCTATTGGCTCTACTATATGCTGACCTTTTTCTCTGGAGCGAGAC GACAGATCTTCATGGTATTTGCTGGATTCATGATGGTGGAAAAGTTTGGCTATAGCATCACCGAGATCACCTCGCTATTC CTGATTAACTATGTCGTCAATTTGATGTTTGCCCCCGCCATTGGTCGCTTTATCGGTCGAATTGGCGAGCGTAATGCACT GACTATCGAATACCTTGGCTTGATCGCAGTGTTTGTCAGCTATGCTCTGGTAGAGCACGCCGAATTTGCCGCCGCGCTCT ACGTTATCGATCATCTACTGTTTGCCATGGCCATTGCAGTAAAAACTTATTTCCAAAAGATTGCCGATCCAAAAGACATT GCCGCCACCATGTCGGTGAGCTTCACCATCAATCATATTGCCGCAGTAATCATCCCAGCCTTACTCGGACTCTTATGGTT AAGCTCGCCTGAGATAGTATTTTATATCGGCGCAGGCTTTGCGGCTTGTTCACTGCTGCTGGCGATTAATGTGCCCCGCC ACCCACAGCGAGGCGATGAGGTCGCACACTTTGGTAAAGTAGTGCAAACTAGGGCTGACTCTATAAATTAG
Upstream 100 bases:
>100_bases CATTATCAAAACTGAAATGGGTATACTGCATGAACATTGAAGCAGCTAGATTCTGCTCACTATTTGGGGTGCACACCGCG ATAAATACAGGGACAGTAAG
Downstream 100 bases:
>100_bases CTGGTTATCAAACAGATAGTCAAACCGGCCAGATAACAACAAGCACCGCTTGTTGATGGTGAATAACAGATCATGGTTGA GACAATAGCAGACGCTGCCA
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Facilitator Family; Transporter MFS Superfamily; Permease Facilitator Superfamily; Permease Of Facilitator Superfamily; Facilitator Superfamily Permease; MFS Protein Permease Component; Multidrug-Efflux Transporter MFS Family; Facilitator Family Transporter
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MKNDPQKLLLWMTFIMSLVFAVWQALLNNFVIERAQFTGAEIGMLQSLREVPGFLAFTAVFVLLLVREQAFALLSLAVLC IGVAITGFFPQVLGLYITTVLMSVGFHYFETVNQSLTLQWVDKKDTPAFLGRALAWRSAAALGGYASIWLIMSWLKLDYQ WMYAIIGSLGLLMVFSVWRYFPNFSQGEVQHKKLLLRKRYWLYYMLTFFSGARRQIFMVFAGFMMVEKFGYSITEITSLF LINYVVNLMFAPAIGRFIGRIGERNALTIEYLGLIAVFVSYALVEHAEFAAALYVIDHLLFAMAIAVKTYFQKIADPKDI AATMSVSFTINHIAAVIIPALLGLLWLSSPEIVFYIGAGFAACSLLLAINVPRHPQRGDEVAHFGKVVQTRADSIN
Sequences:
>Translated_396_residues MKNDPQKLLLWMTFIMSLVFAVWQALLNNFVIERAQFTGAEIGMLQSLREVPGFLAFTAVFVLLLVREQAFALLSLAVLC IGVAITGFFPQVLGLYITTVLMSVGFHYFETVNQSLTLQWVDKKDTPAFLGRALAWRSAAALGGYASIWLIMSWLKLDYQ WMYAIIGSLGLLMVFSVWRYFPNFSQGEVQHKKLLLRKRYWLYYMLTFFSGARRQIFMVFAGFMMVEKFGYSITEITSLF LINYVVNLMFAPAIGRFIGRIGERNALTIEYLGLIAVFVSYALVEHAEFAAALYVIDHLLFAMAIAVKTYFQKIADPKDI AATMSVSFTINHIAAVIIPALLGLLWLSSPEIVFYIGAGFAACSLLLAINVPRHPQRGDEVAHFGKVVQTRADSIN >Mature_396_residues MKNDPQKLLLWMTFIMSLVFAVWQALLNNFVIERAQFTGAEIGMLQSLREVPGFLAFTAVFVLLLVREQAFALLSLAVLC IGVAITGFFPQVLGLYITTVLMSVGFHYFETVNQSLTLQWVDKKDTPAFLGRALAWRSAAALGGYASIWLIMSWLKLDYQ WMYAIIGSLGLLMVFSVWRYFPNFSQGEVQHKKLLLRKRYWLYYMLTFFSGARRQIFMVFAGFMMVEKFGYSITEITSLF LINYVVNLMFAPAIGRFIGRIGERNALTIEYLGLIAVFVSYALVEHAEFAAALYVIDHLLFAMAIAVKTYFQKIADPKDI AATMSVSFTINHIAAVIIPALLGLLWLSSPEIVFYIGAGFAACSLLLAINVPRHPQRGDEVAHFGKVVQTRADSIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44615; Mature: 44615
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNDPQKLLLWMTFIMSLVFAVWQALLNNFVIERAQFTGAEIGMLQSLREVPGFLAFTAV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHH FVLLLVREQAFALLSLAVLCIGVAITGFFPQVLGLYITTVLMSVGFHYFETVNQSLTLQW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE VDKKDTPAFLGRALAWRSAAALGGYASIWLIMSWLKLDYQWMYAIIGSLGLLMVFSVWRY CCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FPNFSQGEVQHKKLLLRKRYWLYYMLTFFSGARRQIFMVFAGFMMVEKFGYSITEITSLF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH LINYVVNLMFAPAIGRFIGRIGERNALTIEYLGLIAVFVSYALVEHAEFAAALYVIDHLL HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAMAIAVKTYFQKIADPKDIAATMSVSFTINHIAAVIIPALLGLLWLSSPEIVFYIGAGF HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHH AACSLLLAINVPRHPQRGDEVAHFGKVVQTRADSIN HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKNDPQKLLLWMTFIMSLVFAVWQALLNNFVIERAQFTGAEIGMLQSLREVPGFLAFTAV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHH FVLLLVREQAFALLSLAVLCIGVAITGFFPQVLGLYITTVLMSVGFHYFETVNQSLTLQW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE VDKKDTPAFLGRALAWRSAAALGGYASIWLIMSWLKLDYQWMYAIIGSLGLLMVFSVWRY CCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FPNFSQGEVQHKKLLLRKRYWLYYMLTFFSGARRQIFMVFAGFMMVEKFGYSITEITSLF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH LINYVVNLMFAPAIGRFIGRIGERNALTIEYLGLIAVFVSYALVEHAEFAAALYVIDHLL HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAMAIAVKTYFQKIADPKDIAATMSVSFTINHIAAVIIPALLGLLWLSSPEIVFYIGAGF HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHH AACSLLLAINVPRHPQRGDEVAHFGKVVQTRADSIN HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA