| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960487
Identifier: 157960487
GI number: 157960487
Start: 817195
End: 818055
Strand: Reverse
Name: 157960487
Synonym: Spea_0659
Alternate gene names: NA
Gene position: 818055-817195 (Counterclockwise)
Preceding gene: 157960488
Following gene: 157960480
Centisome position: 15.81
GC content: 47.27
Gene sequence:
>861_bases ATGAAAACCCCAAAACGACTCCAACCTCTGGTTGATGAAGGACTGATTGACGAAGTGATTCGTCCATTAATGAGCGGCAA AGAAGCCGATGTTTACATTGTTAGATGTGGCGACGATGTTCGCTGCGCCAAAATTTATAAAGAAGCAGATAAACGTAGCT TTAAAAAGGCCGTGGAATATCGAGAAGGTCGTAAAGGTCGTAACTCTCGCCGAACCCGTGCCATGGAGAAAGGCTCCAAC TACGGTCGCCAAGAACAAGAACAGGCTTGGCAAAATGCCGAGGTTGATGCGCTGTTTCGCCTAGCGAATGCTGGCGTGCG TGTACCAACACCTTACGGTTGTTTCGACGGCGTGTTATTGATGGAGTTGATCACCGATGAAGCAGGTTACGTTGCGCCAC GACTAAACGATGTAAGTCTGACTGCCGAAATGGCCACCGCCCACCATGCTTTGGTGATGAAAGATGTGCAACGTATGCTC TGTGCAGGCCTTATTCACGGCGATCTGTCTGAGTTTAACGTACTGCTTGATCATACAGGCCCGGTGATTATTGATCTGCC CCAAGCCGTCGATGCTGCGGCAAACAACAATGCTAAACGTATGCTACTGCGTGATGTGAATAATATGACTCAGTACTATG GCCAATTCGCGCCAGAACTGCTGCGCAGTAAATATGCCCAAGAGATGTGGCTCAAGTTTGAATCAGGTGATTTATTGCCT GACACTGAGTTAACAGGCCAGTTTGTTGAAAGTGAACATAGCGCAGACATTGAATCGGTATTAGCAGAGATCCAAGCAGC ATTTGAAGAAGAGCAAGATCGTAAAGCGCGCATTCAAGCTGAAACTGAAGATGAGTATTAA
Upstream 100 bases:
>100_bases AGTGCGTTTAATCCTGCCAACTCGGCGAATTCGAACATATTTTTCCATGATTCTAAACGAATTCATTCCATCAATCGGCT AACTAAGGTATAAGAGCCCA
Downstream 100 bases:
>100_bases TAGCAATCTAGTCATCTAATGCCAATCGACTGATTTTTATTTAATAAAGCCCTGCAATGTCACCATTGCAGGGCTTTATT ATTGCCTTGGTGTTGTTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: RIO-Like Kinase; Serine/Threonine Protein Kinase; RIO-Type Serine/Threonine Protein Kinase; Kinase; RIO1 Family Protein; RIO-Like Serine/Threonine Protein Kinase II; RIO1//Family Protein; RIO1 Protein; Serine Kinase; Rio-Like Kinase; Atypical Protein Kinase; Serine/Threonine Kinase; Serine/Threonine Family; Rio Kinase Family Protein; SudD-Related Protein; Serine/Threonine P-Like Protein; Rio1 Protein
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MKTPKRLQPLVDEGLIDEVIRPLMSGKEADVYIVRCGDDVRCAKIYKEADKRSFKKAVEYREGRKGRNSRRTRAMEKGSN YGRQEQEQAWQNAEVDALFRLANAGVRVPTPYGCFDGVLLMELITDEAGYVAPRLNDVSLTAEMATAHHALVMKDVQRML CAGLIHGDLSEFNVLLDHTGPVIIDLPQAVDAAANNNAKRMLLRDVNNMTQYYGQFAPELLRSKYAQEMWLKFESGDLLP DTELTGQFVESEHSADIESVLAEIQAAFEEEQDRKARIQAETEDEY
Sequences:
>Translated_286_residues MKTPKRLQPLVDEGLIDEVIRPLMSGKEADVYIVRCGDDVRCAKIYKEADKRSFKKAVEYREGRKGRNSRRTRAMEKGSN YGRQEQEQAWQNAEVDALFRLANAGVRVPTPYGCFDGVLLMELITDEAGYVAPRLNDVSLTAEMATAHHALVMKDVQRML CAGLIHGDLSEFNVLLDHTGPVIIDLPQAVDAAANNNAKRMLLRDVNNMTQYYGQFAPELLRSKYAQEMWLKFESGDLLP DTELTGQFVESEHSADIESVLAEIQAAFEEEQDRKARIQAETEDEY >Mature_286_residues MKTPKRLQPLVDEGLIDEVIRPLMSGKEADVYIVRCGDDVRCAKIYKEADKRSFKKAVEYREGRKGRNSRRTRAMEKGSN YGRQEQEQAWQNAEVDALFRLANAGVRVPTPYGCFDGVLLMELITDEAGYVAPRLNDVSLTAEMATAHHALVMKDVQRML CAGLIHGDLSEFNVLLDHTGPVIIDLPQAVDAAANNNAKRMLLRDVNNMTQYYGQFAPELLRSKYAQEMWLKFESGDLLP DTELTGQFVESEHSADIESVLAEIQAAFEEEQDRKARIQAETEDEY
Specific function: Unknown
COG id: COG1718
COG function: function code TD; Serine/threonine protein kinase involved in cell cycle control
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI23510356, Length=213, Percent_Identity=30.5164319248826, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI115532073, Length=208, Percent_Identity=29.3269230769231, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24662811, Length=251, Percent_Identity=29.0836653386454, Blast_Score=78, Evalue=6e-15, Organism=Drosophila melanogaster, GI21356879, Length=251, Percent_Identity=29.0836653386454, Blast_Score=78, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32320; Mature: 32320
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00109 PROTEIN_KINASE_TYR ; PS01245 RIO1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPKRLQPLVDEGLIDEVIRPLMSGKEADVYIVRCGDDVRCAKIYKEADKRSFKKAVEY CCCCHHHHHHHHCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH REGRKGRNSRRTRAMEKGSNYGRQEQEQAWQNAEVDALFRLANAGVRVPTPYGCFDGVLL HHCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHH MELITDEAGYVAPRLNDVSLTAEMATAHHALVMKDVQRMLCAGLIHGDLSEFNVLLDHTG HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEECCC PVIIDLPQAVDAAANNNAKRMLLRDVNNMTQYYGQFAPELLRSKYAQEMWLKFESGDLLP CEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC DTELTGQFVESEHSADIESVLAEIQAAFEEEQDRKARIQAETEDEY CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKTPKRLQPLVDEGLIDEVIRPLMSGKEADVYIVRCGDDVRCAKIYKEADKRSFKKAVEY CCCCHHHHHHHHCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHH REGRKGRNSRRTRAMEKGSNYGRQEQEQAWQNAEVDALFRLANAGVRVPTPYGCFDGVLL HHCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHH MELITDEAGYVAPRLNDVSLTAEMATAHHALVMKDVQRMLCAGLIHGDLSEFNVLLDHTG HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEECCC PVIIDLPQAVDAAANNNAKRMLLRDVNNMTQYYGQFAPELLRSKYAQEMWLKFESGDLLP CEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCC DTELTGQFVESEHSADIESVLAEIQAAFEEEQDRKARIQAETEDEY CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA