Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is napH [H]

Identifier: 157960450

GI number: 157960450

Start: 764293

End: 765189

Strand: Reverse

Name: napH [H]

Synonym: Spea_0621

Alternate gene names: 157960450

Gene position: 765189-764293 (Counterclockwise)

Preceding gene: 157960451

Following gene: 157960449

Centisome position: 14.79

GC content: 49.5

Gene sequence:

>897_bases
ATGAGCCAGACACTAAAGCAAAAACCGACAACACATGGCTTTGCTAGAGCGGCAATTAAAGAGCTTGGATGGTGGCGTGC
CCACAAATTCCTGTTCCTTCGTCGCCTTAGCCAAGTCAGTGTCTTTGCATTGTTTGCCATTGGCCCTTTGTTCGGACTCT
GGTTACTTAAAGGTAACCTCTCAGCCAGCGAACTCTTCGGTGTTGTGCCTCTATCGGATCCACTTGCTACCTTGCAGGTG
TTGATGACAGGCCATCTACCCGAGCTAAGCTTAATACTTGGCGCCGTGATTATCGCACTGCTGTATGCAGTGCTTGGCGG
CCGAGTATTTTGTAGCTGGGTCTGCCCCGTGAACATGGTGACAGACTTAGCAAGCTGGCTACGACGTAAAATGAACTTGC
CTCGCACCTCTGAGATGCCAAGAAACTTACGTTACTACCTGCTAGCGCTTGTGCTCATACTGCCAATACTTACCGGCATG
GCTGTCTGGGAATGGGTTAATCCCGTCCCGGTACTGTATCGTGCCGCTTTGTTTAGTGCTGGCAGTGGTTTATGGGTCTT
GGCCGCCATCTTCTTACTGGATCTATTTATCAGTGAGAGAGCTTGGTGCGGACACCTGTGCCCAACGGGGGCACTATTTG
GCCTTCTCGGTAAAATCAGTCCGATAAAAGTATCTGCGGTAAATGCAAAAGATTGCGATAACTGTATGGATTGTTTTGTG
GTCTGCCCTGAAAGACAGGTATTAAAGCCTGCCCTCAAAGGCAAGCAGCCCATGATAACCGACAGTGATTGCACTCAATG
CGGCCGCTGTATCGACGTTTGCGCCCAACGCGTTTTCCAGTTTCAGAATCGAAAGTATCAAAATCGAATTGCCCTAAAGG
CGGAGAACAACCAATGA

Upstream 100 bases:

>100_bases
TGTTACCGACTCATATTGCTTTAGGTAAAACAGCTTCTCACGATACCTATATCAACACCGAAGAGACCACGCTTGAGATG
TTAAACAAGGGGCTTGCATT

Downstream 100 bases:

>100_bases
AAAAAGTACTCACCTTAGCTGCGCTAGTGATGGCGCTTAGTGCTTGCTCTGGTCAGCAAGCGAACACTCAAGCCGAGCCT
GTTAACATCAGCTCACTCGG

Product: quinol dehydrogenase membrane component

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSQTLKQKPTTHGFARAAIKELGWWRAHKFLFLRRLSQVSVFALFAIGPLFGLWLLKGNLSASELFGVVPLSDPLATLQV
LMTGHLPELSLILGAVIIALLYAVLGGRVFCSWVCPVNMVTDLASWLRRKMNLPRTSEMPRNLRYYLLALVLILPILTGM
AVWEWVNPVPVLYRAALFSAGSGLWVLAAIFLLDLFISERAWCGHLCPTGALFGLLGKISPIKVSAVNAKDCDNCMDCFV
VCPERQVLKPALKGKQPMITDSDCTQCGRCIDVCAQRVFQFQNRKYQNRIALKAENNQ

Sequences:

>Translated_298_residues
MSQTLKQKPTTHGFARAAIKELGWWRAHKFLFLRRLSQVSVFALFAIGPLFGLWLLKGNLSASELFGVVPLSDPLATLQV
LMTGHLPELSLILGAVIIALLYAVLGGRVFCSWVCPVNMVTDLASWLRRKMNLPRTSEMPRNLRYYLLALVLILPILTGM
AVWEWVNPVPVLYRAALFSAGSGLWVLAAIFLLDLFISERAWCGHLCPTGALFGLLGKISPIKVSAVNAKDCDNCMDCFV
VCPERQVLKPALKGKQPMITDSDCTQCGRCIDVCAQRVFQFQNRKYQNRIALKAENNQ
>Mature_297_residues
SQTLKQKPTTHGFARAAIKELGWWRAHKFLFLRRLSQVSVFALFAIGPLFGLWLLKGNLSASELFGVVPLSDPLATLQVL
MTGHLPELSLILGAVIIALLYAVLGGRVFCSWVCPVNMVTDLASWLRRKMNLPRTSEMPRNLRYYLLALVLILPILTGMA
VWEWVNPVPVLYRAALFSAGSGLWVLAAIFLLDLFISERAWCGHLCPTGALFGLLGKISPIKVSAVNAKDCDNCMDCFVV
CPERQVLKPALKGKQPMITDSDCTQCGRCIDVCAQRVFQFQNRKYQNRIALKAENNQ

Specific function: Involved in electron transfer [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788532, Length=272, Percent_Identity=50.3676470588235, Blast_Score=286, Evalue=9e-79,
Organism=Escherichia coli, GI1787226, Length=267, Percent_Identity=25.4681647940075, Blast_Score=84, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011886 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33209; Mature: 33078

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTLKQKPTTHGFARAAIKELGWWRAHKFLFLRRLSQVSVFALFAIGPLFGLWLLKGNL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SASELFGVVPLSDPLATLQVLMTGHLPELSLILGAVIIALLYAVLGGRVFCSWVCPVNMV
CHHHHEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHEEHHHCHHHHH
TDLASWLRRKMNLPRTSEMPRNLRYYLLALVLILPILTGMAVWEWVNPVPVLYRAALFSA
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
GSGLWVLAAIFLLDLFISERAWCGHLCPTGALFGLLGKISPIKVSAVNAKDCDNCMDCFV
CCCHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
VCPERQVLKPALKGKQPMITDSDCTQCGRCIDVCAQRVFQFQNRKYQNRIALKAENNQ
CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCC
>Mature Secondary Structure 
SQTLKQKPTTHGFARAAIKELGWWRAHKFLFLRRLSQVSVFALFAIGPLFGLWLLKGNL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SASELFGVVPLSDPLATLQVLMTGHLPELSLILGAVIIALLYAVLGGRVFCSWVCPVNMV
CHHHHEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHEEHHHCHHHHH
TDLASWLRRKMNLPRTSEMPRNLRYYLLALVLILPILTGMAVWEWVNPVPVLYRAALFSA
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC
GSGLWVLAAIFLLDLFISERAWCGHLCPTGALFGLLGKISPIKVSAVNAKDCDNCMDCFV
CCCHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
VCPERQVLKPALKGKQPMITDSDCTQCGRCIDVCAQRVFQFQNRKYQNRIALKAENNQ
CCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]