| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960425
Identifier: 157960425
GI number: 157960425
Start: 732137
End: 733801
Strand: Reverse
Name: 157960425
Synonym: Spea_0596
Alternate gene names: NA
Gene position: 733801-732137 (Counterclockwise)
Preceding gene: 157960426
Following gene: 157960424
Centisome position: 14.18
GC content: 48.83
Gene sequence:
>1665_bases ATGTTACGCCCAGAGCTCATTGAGTTTAGCCTCGACAACCAAAAAGCCGAATTAAAAATTGTACCTAATCTTCATGGTCC GATTACAGAAGACGATTTACTACAATTATTGGCGCTACCTGACTTTTCTTATCTGTGCCCCTTGCACGCAGTCATCACTC AAGCAGTCATTCAAGTCAACCAATTGCACCCTCAAGATGAAGGTAACATCGAGCTATTTTTTGAAATAGCAGAAAGACGT GACGCCGAAATCAGCTTCGAAATTGCCAGCGACAAGATGCAAGCTAGCATGGCCTTGACCGCAGCCTATGGCGGTAAAAG CTTAGGGCTTAGAGATGTACTGCAAAACCTCAAGCTGCAGCGCATTAGCATGGGGCTGAGCAAAGCCAAAATTGAAGCCC TATTAGTAGAGTTTGCCACACTTTCCCCCGGTGAAAAGTGTCACAGTGTCATCGCCAATGGCCGAGCAGCCGTGAATGGC AGCCCTGCCAAGTTAGAGAGAAAAGTGTCCTTGGCAAGGGAGCGATTACTGCAACCGCAACACAATAGCGATGGCACCGT CGATATGCGTAATCTAGGTGCAATCATCATGGTCAAACCGGGTAATTTGCTCATAGAGAAGCACCCTGCGACCCAAGGCG TTAACGGCTATAACGTCTATGGCGAAACGCTTATCGCCAAGCCGGGGAAAGATCTTAAGTTCACCGCAGGTAATGGCACC GAGTTTGCCGCAAATAACCCCAACCAACTCATCGCTACCGTGGCAGGTCAACCGGTCGAAACCCCATCGGGAATGCAGGT AGATGACGTTTTGCAGATCAAAAACGTCGATGTGGGTTATGGTCACGTAGATTTTAAAGGCAGCGTACTGATCACTGGCG ATGTCGGCGAAGGCATGGTCGTAAAAAGCCATGGTGATATCACTGTGATGGGCTTTGTCGATTCAGCCACCCTTGAGGCC AAGGGCGACATTACAGTCAGCAAGGGGGTTATTGGCCGCCAGCTAAAAGACCTCAGCCTGTCGACTAAGTTAATCGCTCA GGGTCAGATCAGCGCACAATTCGTGCAGTACTCCCAGCTTAAGGCTAAGGGTAATATCCTAGTGACCAAGCAGCTTCTGC ATAGCCACACTCAGACTCAACAACAATTAATAGTCAGTGATGCAAGCGCCCGCCGCGGCGATCTTGTTGGCGGCAAGGCT GAGGCCAATAAAGGCATTAAGGCGGTTGCTATCGGCGCCACCGCCGATACCAAAACCGAACTTTTCTGTGCCATGGAGCT GACAGAATTAAAACAACAACTCAAGCAGCTAGATCAAAGCATTAAGTCCATGGTCGTTGCGGGTCTGAATATTGAGGCTC AACTCAGAAAACTGCCTCCCAAAGAGCAGTGGCAAGCAGATGCCATGATGGTTGAGCAGGTGAAGGTCATGCTAGAAGAG AAGCGCCGCACCGTGGTGTTCCGCACGCAAGAGGAACTTGAGTTTGAGGCATTAAAGCTAGAGATAGAAGGCTACTATAA GCACTATCGTATCGATGCGCTCAAACATGTTTTCTCTAATGTTGAGCTCCATGTTGGAACGGCATTTCAACGCACTCAAA GAGAACATGGCCCCTGTCAAATCAGCAATAAAAACCAAGAGATCCGCTTCGATTATAGCCATTAG
Upstream 100 bases:
>100_bases CAGACACTTTTTAACCAAGCTCTTATATGGTTATACTCGCTGAGCAGTTTTTTTAATAAAAACAATATTAATAAAAATAA TAAAAAATGATGGGGTTTTT
Downstream 100 bases:
>100_bases CGATTGATTACGCCCTTTTTCAGGATAATTTGGCAGCTTTCAAACGCTTCTGACTTTCCTTACACAGGGCATTCACGGCA TAATTAACTCACTTTTATCC
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Protein; Two-Component Fusion Protein; Serine/Threonine Protein Kinase
Number of amino acids: Translated: 554; Mature: 554
Protein sequence:
>554_residues MLRPELIEFSLDNQKAELKIVPNLHGPITEDDLLQLLALPDFSYLCPLHAVITQAVIQVNQLHPQDEGNIELFFEIAERR DAEISFEIASDKMQASMALTAAYGGKSLGLRDVLQNLKLQRISMGLSKAKIEALLVEFATLSPGEKCHSVIANGRAAVNG SPAKLERKVSLARERLLQPQHNSDGTVDMRNLGAIIMVKPGNLLIEKHPATQGVNGYNVYGETLIAKPGKDLKFTAGNGT EFAANNPNQLIATVAGQPVETPSGMQVDDVLQIKNVDVGYGHVDFKGSVLITGDVGEGMVVKSHGDITVMGFVDSATLEA KGDITVSKGVIGRQLKDLSLSTKLIAQGQISAQFVQYSQLKAKGNILVTKQLLHSHTQTQQQLIVSDASARRGDLVGGKA EANKGIKAVAIGATADTKTELFCAMELTELKQQLKQLDQSIKSMVVAGLNIEAQLRKLPPKEQWQADAMMVEQVKVMLEE KRRTVVFRTQEELEFEALKLEIEGYYKHYRIDALKHVFSNVELHVGTAFQRTQREHGPCQISNKNQEIRFDYSH
Sequences:
>Translated_554_residues MLRPELIEFSLDNQKAELKIVPNLHGPITEDDLLQLLALPDFSYLCPLHAVITQAVIQVNQLHPQDEGNIELFFEIAERR DAEISFEIASDKMQASMALTAAYGGKSLGLRDVLQNLKLQRISMGLSKAKIEALLVEFATLSPGEKCHSVIANGRAAVNG SPAKLERKVSLARERLLQPQHNSDGTVDMRNLGAIIMVKPGNLLIEKHPATQGVNGYNVYGETLIAKPGKDLKFTAGNGT EFAANNPNQLIATVAGQPVETPSGMQVDDVLQIKNVDVGYGHVDFKGSVLITGDVGEGMVVKSHGDITVMGFVDSATLEA KGDITVSKGVIGRQLKDLSLSTKLIAQGQISAQFVQYSQLKAKGNILVTKQLLHSHTQTQQQLIVSDASARRGDLVGGKA EANKGIKAVAIGATADTKTELFCAMELTELKQQLKQLDQSIKSMVVAGLNIEAQLRKLPPKEQWQADAMMVEQVKVMLEE KRRTVVFRTQEELEFEALKLEIEGYYKHYRIDALKHVFSNVELHVGTAFQRTQREHGPCQISNKNQEIRFDYSH >Mature_554_residues MLRPELIEFSLDNQKAELKIVPNLHGPITEDDLLQLLALPDFSYLCPLHAVITQAVIQVNQLHPQDEGNIELFFEIAERR DAEISFEIASDKMQASMALTAAYGGKSLGLRDVLQNLKLQRISMGLSKAKIEALLVEFATLSPGEKCHSVIANGRAAVNG SPAKLERKVSLARERLLQPQHNSDGTVDMRNLGAIIMVKPGNLLIEKHPATQGVNGYNVYGETLIAKPGKDLKFTAGNGT EFAANNPNQLIATVAGQPVETPSGMQVDDVLQIKNVDVGYGHVDFKGSVLITGDVGEGMVVKSHGDITVMGFVDSATLEA KGDITVSKGVIGRQLKDLSLSTKLIAQGQISAQFVQYSQLKAKGNILVTKQLLHSHTQTQQQLIVSDASARRGDLVGGKA EANKGIKAVAIGATADTKTELFCAMELTELKQQLKQLDQSIKSMVVAGLNIEAQLRKLPPKEQWQADAMMVEQVKVMLEE KRRTVVFRTQEELEFEALKLEIEGYYKHYRIDALKHVFSNVELHVGTAFQRTQREHGPCQISNKNQEIRFDYSH
Specific function: Unknown
COG id: COG1315
COG function: function code L; Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60856; Mature: 60856
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRPELIEFSLDNQKAELKIVPNLHGPITEDDLLQLLALPDFSYLCPLHAVITQAVIQVN CCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH QLHPQDEGNIELFFEIAERRDAEISFEIASDKMQASMALTAAYGGKSLGLRDVLQNLKLQ HCCCCCCCCEEEEEEEECCCCCEEEEEEECCHHHHHEEEEEECCCCCCCHHHHHHHCCHH RISMGLSKAKIEALLVEFATLSPGEKCHSVIANGRAAVNGSPAKLERKVSLARERLLQPQ HHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCC HNSDGTVDMRNLGAIIMVKPGNLLIEKHPATQGVNGYNVYGETLIAKPGKDLKFTAGNGT CCCCCCEEHHHCCEEEEECCCCEEEEECCCCCCCCCEEEECCEEEECCCCCEEEECCCCC EFAANNPNQLIATVAGQPVETPSGMQVDDVLQIKNVDVGYGHVDFKGSVLITGDVGEGMV EECCCCCCEEEEEECCCCCCCCCCCCHHHEEEEECCCCCCCEEEECCCEEEEECCCCCEE VKSHGDITVMGFVDSATLEAKGDITVSKGVIGRQLKDLSLSTKLIAQGQISAQFVQYSQL EECCCCEEEEEEECCCEEECCCCEEEECCCHHHHHHHCCCCHHEEECCCHHHHHHHHHHH KAKGNILVTKQLLHSHTQTQQQLIVSDASARRGDLVGGKAEANKGIKAVAIGATADTKTE HCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCE LFCAMELTELKQQLKQLDQSIKSMVVAGLNIEAQLRKLPPKEQWQADAMMVEQVKVMLEE EEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH KRRTVVFRTQEELEFEALKLEIEGYYKHYRIDALKHVFSNVELHVGTAFQRTQREHGPCQ CCCEEEEEEHHHCCEEEEEEEEEEHHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCEE ISNKNQEIRFDYSH ECCCCCEEEEECCC >Mature Secondary Structure MLRPELIEFSLDNQKAELKIVPNLHGPITEDDLLQLLALPDFSYLCPLHAVITQAVIQVN CCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH QLHPQDEGNIELFFEIAERRDAEISFEIASDKMQASMALTAAYGGKSLGLRDVLQNLKLQ HCCCCCCCCEEEEEEEECCCCCEEEEEEECCHHHHHEEEEEECCCCCCCHHHHHHHCCHH RISMGLSKAKIEALLVEFATLSPGEKCHSVIANGRAAVNGSPAKLERKVSLARERLLQPQ HHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCC HNSDGTVDMRNLGAIIMVKPGNLLIEKHPATQGVNGYNVYGETLIAKPGKDLKFTAGNGT CCCCCCEEHHHCCEEEEECCCCEEEEECCCCCCCCCEEEECCEEEECCCCCEEEECCCCC EFAANNPNQLIATVAGQPVETPSGMQVDDVLQIKNVDVGYGHVDFKGSVLITGDVGEGMV EECCCCCCEEEEEECCCCCCCCCCCCHHHEEEEECCCCCCCEEEECCCEEEEECCCCCEE VKSHGDITVMGFVDSATLEAKGDITVSKGVIGRQLKDLSLSTKLIAQGQISAQFVQYSQL EECCCCEEEEEEECCCEEECCCCEEEECCCHHHHHHHCCCCHHEEECCCHHHHHHHHHHH KAKGNILVTKQLLHSHTQTQQQLIVSDASARRGDLVGGKAEANKGIKAVAIGATADTKTE HCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCE LFCAMELTELKQQLKQLDQSIKSMVVAGLNIEAQLRKLPPKEQWQADAMMVEQVKVMLEE EEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH KRRTVVFRTQEELEFEALKLEIEGYYKHYRIDALKHVFSNVELHVGTAFQRTQREHGPCQ CCCEEEEEEHHHCCEEEEEEEEEEHHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCEE ISNKNQEIRFDYSH ECCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA