| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157960424
Identifier: 157960424
GI number: 157960424
Start: 730899
End: 732023
Strand: Reverse
Name: 157960424
Synonym: Spea_0595
Alternate gene names: NA
Gene position: 732023-730899 (Counterclockwise)
Preceding gene: 157960425
Following gene: 157960422
Centisome position: 14.15
GC content: 46.76
Gene sequence:
>1125_bases GTGGAATTATTGAAGATCGATTGCCTTGGCAAGCCCTTACGCTTAGAGGGTTCTCTTGCAGGCTGGCAACAACTATTTTG GGGCGATAGCTTAGTATCCGTTATTCAGGCAAGCCCAGATAATGAAGGCCTTAAGAGCCATGATTTTGAGTTATCGATTC AAGATCCTGCTTTGGAGCAAGCTGCTGATGCTGAACTCCCACCGCTAAAGACCATTAAAATCACCCTTGAGACCGATCTA CAATGGCAACCCTTTGTTATTGATTATCGCCTGCTCAAAGATGATGAAGTCATTACCACAGGTCAACGCACCACCAAAGA CATTGAGCGCCAAACGCCGACTACCCCTATCCCAGAGAAAAGACAGTTTAGTGTGGTGGGTCTTGCATCACTGGGCTTTA AGCTACTGAAGAGTGCCAAGGTGATTAAGGTACTTCTCGCAGGAGCCAGTGTCGCAGCCTACTCTTGGCTGTTTTCATTT CAGTTCGCATTGGCACTTATCGCCTGTTTGGTATTCCATGAGTATGGCCATATCCGTGCCATGAAATACTTTGGCATGAA AACCAAAGGCATCTACTTAATTCCCTTTATGGGCGGCTTAGCCTTAAGCGATGAGAAAATTAATACCCGATGGCAAGATG TAGTGATCTCCATTATGGGGCCCACTTTCGGCCTATTTATGTCAATCGCATCTCTTGTGGCCTATTGGGTTACAGGTAAT ATTTTCTTTGCCGGACTAGCCACCTTCAACGCACTGCTGAATCTGTTTAATCTACTGCCAATCCTGCCCCTCGATGGTGG TCATATCCTTAAAAGCATCAGCTTCTCAATGAACAGTAAGATGGGATTGGTGGCGTGTATTCTTGGCGCAGCAGTTGGGG TTTATATCAGTTACTCACTGGGGCTCGCCTTGCTTGGCTTCTTACTGCTTATAGGTAGTGCGGAGATTGTGTTTGAGTGG AAGACCCGCCATCAGAGTCACCTTCTGCCACTGGATAGATATGGACAGATTTTTTCAGCAGTCTGGTACTTCATAACCGT GGCGGCACTGATTGGCATCATCTGGTACTTCGCTGGCAGCGGCGATGAGATGCTAGCCTTGCCATTAGAGATCTTAAAGA GCTAA
Upstream 100 bases:
>100_bases CCTTTTTCAGGATAATTTGGCAGCTTTCAAACGCTTCTGACTTTCCTTACACAGGGCATTCACGGCATAATTAACTCACT TTTATCCTTTGAGTTAACAC
Downstream 100 bases:
>100_bases TAGCTGCTATTACGGCAATAAAAAAGGGCATTAATTAATGCCCTTTTTACTGTCTAGAACGAGATTAAGTTAAGGGTTAA GGGCTAAGGGTTAATCGCCA
Product: peptidase M50
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MELLKIDCLGKPLRLEGSLAGWQQLFWGDSLVSVIQASPDNEGLKSHDFELSIQDPALEQAADAELPPLKTIKITLETDL QWQPFVIDYRLLKDDEVITTGQRTTKDIERQTPTTPIPEKRQFSVVGLASLGFKLLKSAKVIKVLLAGASVAAYSWLFSF QFALALIACLVFHEYGHIRAMKYFGMKTKGIYLIPFMGGLALSDEKINTRWQDVVISIMGPTFGLFMSIASLVAYWVTGN IFFAGLATFNALLNLFNLLPILPLDGGHILKSISFSMNSKMGLVACILGAAVGVYISYSLGLALLGFLLLIGSAEIVFEW KTRHQSHLLPLDRYGQIFSAVWYFITVAALIGIIWYFAGSGDEMLALPLEILKS
Sequences:
>Translated_374_residues MELLKIDCLGKPLRLEGSLAGWQQLFWGDSLVSVIQASPDNEGLKSHDFELSIQDPALEQAADAELPPLKTIKITLETDL QWQPFVIDYRLLKDDEVITTGQRTTKDIERQTPTTPIPEKRQFSVVGLASLGFKLLKSAKVIKVLLAGASVAAYSWLFSF QFALALIACLVFHEYGHIRAMKYFGMKTKGIYLIPFMGGLALSDEKINTRWQDVVISIMGPTFGLFMSIASLVAYWVTGN IFFAGLATFNALLNLFNLLPILPLDGGHILKSISFSMNSKMGLVACILGAAVGVYISYSLGLALLGFLLLIGSAEIVFEW KTRHQSHLLPLDRYGQIFSAVWYFITVAALIGIIWYFAGSGDEMLALPLEILKS >Mature_374_residues MELLKIDCLGKPLRLEGSLAGWQQLFWGDSLVSVIQASPDNEGLKSHDFELSIQDPALEQAADAELPPLKTIKITLETDL QWQPFVIDYRLLKDDEVITTGQRTTKDIERQTPTTPIPEKRQFSVVGLASLGFKLLKSAKVIKVLLAGASVAAYSWLFSF QFALALIACLVFHEYGHIRAMKYFGMKTKGIYLIPFMGGLALSDEKINTRWQDVVISIMGPTFGLFMSIASLVAYWVTGN IFFAGLATFNALLNLFNLLPILPLDGGHILKSISFSMNSKMGLVACILGAAVGVYISYSLGLALLGFLLLIGSAEIVFEW KTRHQSHLLPLDRYGQIFSAVWYFITVAALIGIIWYFAGSGDEMLALPLEILKS
Specific function: Unknown
COG id: COG1994
COG function: function code R; Zn-dependent proteases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000644 - InterPro: IPR008915 - InterPro: IPR016483 [H]
Pfam domain/function: PF00571 CBS; PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 41336; Mature: 41336
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELLKIDCLGKPLRLEGSLAGWQQLFWGDSLVSVIQASPDNEGLKSHDFELSIQDPALEQ CCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHH AADAELPPLKTIKITLETDLQWQPFVIDYRLLKDDEVITTGQRTTKDIERQTPTTPIPEK HCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCEEECCCHHHHHHHHCCCCCCCCCC RQFSVVGLASLGFKLLKSAKVIKVLLAGASVAAYSWLFSFQFALALIACLVFHEYGHIRA CCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE MKYFGMKTKGIYLIPFMGGLALSDEKINTRWQDVVISIMGPTFGLFMSIASLVAYWVTGN EHHCCCCCCCEEEEEECCCEEECCCHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH IFFAGLATFNALLNLFNLLPILPLDGGHILKSISFSMNSKMGLVACILGAAVGVYISYSL HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GLALLGFLLLIGSAEIVFEWKTRHQSHLLPLDRYGQIFSAVWYFITVAALIGIIWYFAGS HHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GDEMLALPLEILKS CCCEEEECHHHHCC >Mature Secondary Structure MELLKIDCLGKPLRLEGSLAGWQQLFWGDSLVSVIQASPDNEGLKSHDFELSIQDPALEQ CCEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCHHHH AADAELPPLKTIKITLETDLQWQPFVIDYRLLKDDEVITTGQRTTKDIERQTPTTPIPEK HCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCEEECCCHHHHHHHHCCCCCCCCCC RQFSVVGLASLGFKLLKSAKVIKVLLAGASVAAYSWLFSFQFALALIACLVFHEYGHIRA CCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE MKYFGMKTKGIYLIPFMGGLALSDEKINTRWQDVVISIMGPTFGLFMSIASLVAYWVTGN EHHCCCCCCCEEEEEECCCEEECCCHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH IFFAGLATFNALLNLFNLLPILPLDGGHILKSISFSMNSKMGLVACILGAAVGVYISYSL HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH GLALLGFLLLIGSAEIVFEWKTRHQSHLLPLDRYGQIFSAVWYFITVAALIGIIWYFAGS HHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GDEMLALPLEILKS CCCEEEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]