Definition | Rickettsia akari str. Hartford, complete genome. |
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Accession | NC_009881 |
Length | 1,231,060 |
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The map label for this gene is dut [H]
Identifier: 157825674
GI number: 157825674
Start: 537731
End: 538177
Strand: Direct
Name: dut [H]
Synonym: A1C_02980
Alternate gene names: 157825674
Gene position: 537731-538177 (Clockwise)
Preceding gene: 157825673
Following gene: 157825675
Centisome position: 43.68
GC content: 37.58
Gene sequence:
>447_bases ATGAATATAACGCAAGTTAAAATTAAGAAATTAGAAAATTTTTCAGGTAGTTTGCCGGAATATGCTACAGAGCATAGTGC TGGGATGGATTTAATAGCCGCAAATGAGCAACCTATAACAATAAAAGCAGGTGAAATACAGCTAATTCCAACCGGTATCG CTATAGCATTACCTTACTCATTTGAAGCACAGATAAGACCTCGTTCGGGTCTTGCAGTTAAACACGGTATTACGGTTGCT AATTCACCTGGTACTATTGATGCAGATTATAGAGGCGAAATAAAGGTGATTCTTATTAATCTTGGTACACAAGATTTCGT TATAGAAAAAGGGATGCGAATTGCTCAGATCATAATATCCAAGTACGAACGTATATTATGGGAAGAAAGTAGTATCCTTA CGGAAACGATGCGTGGTAGCGGTGGTTTTGGTTCTACTGGTGTTTAA
Upstream 100 bases:
>100_bases TGCTCGCGTACTTTTGTACGCTCCGCTCCTCGGCGTGCAAACTCATTGCTCTTTTCCAAGTTGATCTTCGTATATCAACT CTTCACGTATGAGAAAGATT
Downstream 100 bases:
>100_bases GGATTCTAAAAACGTTATTGCAAGTGGGTATTGCCCTAATCGTCATTGCGAGCGACCGTAGGGAGCGTGGCAATCTAGAG CAAGATTTAAAAAATTCTAT
Product: deoxyuridine 5'-triphosphate nucleotidohydrolase
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MNITQVKIKKLENFSGSLPEYATEHSAGMDLIAANEQPITIKAGEIQLIPTGIAIALPYSFEAQIRPRSGLAVKHGITVA NSPGTIDADYRGEIKVILINLGTQDFVIEKGMRIAQIIISKYERILWEESSILTETMRGSGGFGSTGV
Sequences:
>Translated_148_residues MNITQVKIKKLENFSGSLPEYATEHSAGMDLIAANEQPITIKAGEIQLIPTGIAIALPYSFEAQIRPRSGLAVKHGITVA NSPGTIDADYRGEIKVILINLGTQDFVIEKGMRIAQIIISKYERILWEESSILTETMRGSGGFGSTGV >Mature_148_residues MNITQVKIKKLENFSGSLPEYATEHSAGMDLIAANEQPITIKAGEIQLIPTGIAIALPYSFEAQIRPRSGLAVKHGITVA NSPGTIDADYRGEIKVILINLGTQDFVIEKGMRIAQIIISKYERILWEESSILTETMRGSGGFGSTGV
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=146, Percent_Identity=43.1506849315069, Blast_Score=102, Evalue=1e-22, Organism=Homo sapiens, GI70906441, Length=146, Percent_Identity=43.1506849315069, Blast_Score=102, Evalue=1e-22, Organism=Homo sapiens, GI4503423, Length=146, Percent_Identity=43.1506849315069, Blast_Score=102, Evalue=1e-22, Organism=Escherichia coli, GI1790071, Length=149, Percent_Identity=38.255033557047, Blast_Score=98, Evalue=3e-22, Organism=Caenorhabditis elegans, GI71988561, Length=147, Percent_Identity=42.1768707482993, Blast_Score=116, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6319729, Length=152, Percent_Identity=41.4473684210526, Blast_Score=98, Evalue=5e-22, Organism=Drosophila melanogaster, GI24583610, Length=133, Percent_Identity=37.593984962406, Blast_Score=80, Evalue=6e-16, Organism=Drosophila melanogaster, GI19921126, Length=133, Percent_Identity=37.593984962406, Blast_Score=80, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 16033; Mature: 16033
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNITQVKIKKLENFSGSLPEYATEHSAGMDLIAANEQPITIKAGEIQLIPTGIAIALPYS CCCCHHHHHHHHCCCCCCCCHHHHCCCCCEEEECCCCCEEEECCEEEEEECCEEEEECCC FEAQIRPRSGLAVKHGITVANSPGTIDADYRGEIKVILINLGTQDFVIEKGMRIAQIIIS CEEEECCCCCCEEECCEEEECCCCEECCCCCCCEEEEEEECCCCHHHHHCCCHHHHHHHH KYERILWEESSILTETMRGSGGFGSTGV HHHHHHHCCCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNITQVKIKKLENFSGSLPEYATEHSAGMDLIAANEQPITIKAGEIQLIPTGIAIALPYS CCCCHHHHHHHHCCCCCCCCHHHHCCCCCEEEECCCCCEEEECCEEEEEECCEEEEECCC FEAQIRPRSGLAVKHGITVANSPGTIDADYRGEIKVILINLGTQDFVIEKGMRIAQIIIS CEEEECCCCCCEEECCEEEECCCCEECCCCCCCEEEEEEECCCCHHHHHCCCHHHHHHHH KYERILWEESSILTETMRGSGGFGSTGV HHHHHHHCCCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA