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The map label for this gene is opsX [H]

Identifier: 157373062

GI number: 157373062

Start: 5350180

End: 5351271

Strand: Reverse

Name: opsX [H]

Synonym: Spro_4830

Alternate gene names: 157373062

Gene position: 5351271-5350180 (Counterclockwise)

Preceding gene: 157373063

Following gene: 157373056

Centisome position: 98.21

GC content: 46.25

Gene sequence:

>1092_bases
ATGTCGAAGCAATGGAAATTAAAGTTGGCGAATGCTTGTCTCCGACTTTATACAAAACTTGGTAGTAATTTTAAAGATAA
GCGTTCGTTTGATAAAAGCCGTGAGTTTGATCGTATCGCTATTTTCTCGACAACCGCGCTGGGCGATTTGATGTTTAATA
CTCCGGCGATTCGCGCTATCCATGAACGCTATCCCGCTGCGGAGATTACTCTGGTCTCAAGTCACAAGAATAGAGGTCTG
GTAGGAACTAGTCCTTATTTCAGTAGTGTGATTTATTGGGATCACAAAGCAAAAGATATGCTCAGCGTGATCTGCCAGTT
GAAGAAAAAAAGACCGCAACTGGCAATAATTCTGCACTCTAAAGCGCCTTATGATGTCATCACTGCGATATTCGCGGGTT
GTGAATACGTATTTAAGGACGTCTATAAGAACGATTTGGCGGGCATGGACCAGTGGCTGACGGGCATTAGCATTCGTGGC
AAGGATCATTTGATTCAGCGTAAACTGGAGCTAGTGGGGTTATTAGGCTGTGCTACTGATAACCGAGAAATGTTTATCCC
TGTAGATTTTCCGCAACAGCAAAAACAGCTGAATAAAATTGTGGTGGGCTTCCAAATGGGGGCTTCTGAATCACTACGTT
GTTGGCCGGTGGCCAGATTTGTCGGCTTGGCAAAAATGCTGCTGGCGCATTCTCCAGATTACAGTATCGCCCTGATTGGA
ACGCCGAAAGAACAAGATATTGAGTGTGAATTTATGGCGGGGTTAACGGCGGAAGAGCGAGAGCGAGTGGTCAGCTATAT
TGGGAAAACTACCTTACCACAACTGTTGGCCGTGATGAAAAACATGGACGTACTGGTTACCGGCGATACCGGTCCGTTAC
ATCTGGCTATTGCGTTGAAAACGAGAACTGTCAGCCTGTTTGCGAGTGCGAATCCAGAACAAACGGGGCCCTATCAGAAT
CCTGAACTTCATCGGGTGATACACGTGCCGGTAGAAACACAGCCGCTGGGAGCAGAACAACGTTATCAACCCTTAAGCAT
CATCACCAGTCATGAGGTGATGGAGAAGGTAATAAAGGTGCTCGGTGAATAG

Upstream 100 bases:

>100_bases
GAAGTGTTATATCGTGATTTGGAGCAGCTTTTTGCCTGGCTGCAGCAACGCACGGTGGGTATGACGTTGGCCGAATATTA
TCAACTTAAAGTGAACTGAG

Downstream 100 bases:

>100_bases
TTAAAGGTATCGATAATTATACCGGCATAGCGCCATCATTTATAATGATGGCGCTATTTGTCCATTACGGTAGGTGAGAT
TTCAGTCTGGTGGACATAAT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MSKQWKLKLANACLRLYTKLGSNFKDKRSFDKSREFDRIAIFSTTALGDLMFNTPAIRAIHERYPAAEITLVSSHKNRGL
VGTSPYFSSVIYWDHKAKDMLSVICQLKKKRPQLAIILHSKAPYDVITAIFAGCEYVFKDVYKNDLAGMDQWLTGISIRG
KDHLIQRKLELVGLLGCATDNREMFIPVDFPQQQKQLNKIVVGFQMGASESLRCWPVARFVGLAKMLLAHSPDYSIALIG
TPKEQDIECEFMAGLTAEERERVVSYIGKTTLPQLLAVMKNMDVLVTGDTGPLHLAIALKTRTVSLFASANPEQTGPYQN
PELHRVIHVPVETQPLGAEQRYQPLSIITSHEVMEKVIKVLGE

Sequences:

>Translated_363_residues
MSKQWKLKLANACLRLYTKLGSNFKDKRSFDKSREFDRIAIFSTTALGDLMFNTPAIRAIHERYPAAEITLVSSHKNRGL
VGTSPYFSSVIYWDHKAKDMLSVICQLKKKRPQLAIILHSKAPYDVITAIFAGCEYVFKDVYKNDLAGMDQWLTGISIRG
KDHLIQRKLELVGLLGCATDNREMFIPVDFPQQQKQLNKIVVGFQMGASESLRCWPVARFVGLAKMLLAHSPDYSIALIG
TPKEQDIECEFMAGLTAEERERVVSYIGKTTLPQLLAVMKNMDVLVTGDTGPLHLAIALKTRTVSLFASANPEQTGPYQN
PELHRVIHVPVETQPLGAEQRYQPLSIITSHEVMEKVIKVLGE
>Mature_362_residues
SKQWKLKLANACLRLYTKLGSNFKDKRSFDKSREFDRIAIFSTTALGDLMFNTPAIRAIHERYPAAEITLVSSHKNRGLV
GTSPYFSSVIYWDHKAKDMLSVICQLKKKRPQLAIILHSKAPYDVITAIFAGCEYVFKDVYKNDLAGMDQWLTGISIRGK
DHLIQRKLELVGLLGCATDNREMFIPVDFPQQQKQLNKIVVGFQMGASESLRCWPVARFVGLAKMLLAHSPDYSIALIGT
PKEQDIECEFMAGLTAEERERVVSYIGKTTLPQLLAVMKNMDVLVTGDTGPLHLAIALKTRTVSLFASANPEQTGPYQNP
ELHRVIHVPVETQPLGAEQRYQPLSIITSHEVMEKVIKVLGE

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790050, Length=352, Percent_Identity=23.2954545454545, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 40777; Mature: 40646

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQWKLKLANACLRLYTKLGSNFKDKRSFDKSREFDRIAIFSTTALGDLMFNTPAIRAI
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEHHHHHHHHHCCHHHHHH
HERYPAAEITLVSSHKNRGLVGTSPYFSSVIYWDHKAKDMLSVICQLKKKRPQLAIILHS
HHHCCCEEEEEEECCCCCCCEECCHHHHCEEEECCHHHHHHHHHHHHHHCCCCEEEEEEC
KAPYDVITAIFAGCEYVFKDVYKNDLAGMDQWLTGISIRGKDHLIQRKLELVGLLGCATD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEECCHHHHHHHHHHHHHHEEECCC
NREMFIPVDFPQQQKQLNKIVVGFQMGASESLRCWPVARFVGLAKMLLAHSPDYSIALIG
CCEEEEECCCCHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE
TPKEQDIECEFMAGLTAEERERVVSYIGKTTLPQLLAVMKNMDVLVTGDTGPLHLAIALK
CCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEECCCCCEEEEEEEE
TRTVSLFASANPEQTGPYQNPELHRVIHVPVETQPLGAEQRYQPLSIITSHEVMEKVIKV
EEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHH
LGE
HCC
>Mature Secondary Structure 
SKQWKLKLANACLRLYTKLGSNFKDKRSFDKSREFDRIAIFSTTALGDLMFNTPAIRAI
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEEHHHHHHHHHCCHHHHHH
HERYPAAEITLVSSHKNRGLVGTSPYFSSVIYWDHKAKDMLSVICQLKKKRPQLAIILHS
HHHCCCEEEEEEECCCCCCCEECCHHHHCEEEECCHHHHHHHHHHHHHHCCCCEEEEEEC
KAPYDVITAIFAGCEYVFKDVYKNDLAGMDQWLTGISIRGKDHLIQRKLELVGLLGCATD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEECCHHHHHHHHHHHHHHEEECCC
NREMFIPVDFPQQQKQLNKIVVGFQMGASESLRCWPVARFVGLAKMLLAHSPDYSIALIG
CCEEEEECCCCHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE
TPKEQDIECEFMAGLTAEERERVVSYIGKTTLPQLLAVMKNMDVLVTGDTGPLHLAIALK
CCCCCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEECCCCCEEEEEEEE
TRTVSLFASANPEQTGPYQNPELHRVIHVPVETQPLGAEQRYQPLSIITSHEVMEKVIKV
EEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHH
LGE
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]