Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is 157373063
Identifier: 157373063
GI number: 157373063
Start: 5351273
End: 5352229
Strand: Reverse
Name: 157373063
Synonym: Spro_4831
Alternate gene names: NA
Gene position: 5352229-5351273 (Counterclockwise)
Preceding gene: 157373067
Following gene: 157373062
Centisome position: 98.23
GC content: 52.66
Gene sequence:
>957_bases ATGACCAAACCGGCATTTCTCATCACCATTGATACCGAAGGCGACAATCTGTGGCAAAACCACGATCGTATTTCGACCGA AAACACGCGCTTTTTGCCGCGCTTTCAGGCGTTGTGTGAGAAATATGGCTTTAAGCCGGTGTACCTCACCAACTACGAAA TGGCGGTGGATGCAGAGTATGTCGAGTTCGCCCGTGATGTGATTGCGCGTAATACCGGGGAAGTTGGCATGCATCTGCAT GCCTGGAACAGTCCGCCGCTGACGCCATTAACCGACGACGACTGGCGACATAAACCCTATCTGATCGAATACCCGGCCGA TCAAATCCGCGCCAAGGTCGATCATATGACCAAACTGCTGGAAGACAGCTTCCAGACCAAGATGCTCAGCCACCGTGCCG GGCGCTGGGCTTTTAATGAATACTATGCGGCTTTGCTGCTGGAATATGGCTATCAGGTGGATTGCTCGGTGACGCCGCGA GTGAACTGGCAATATTCACCGGGTAATCCACAAGGCAACGGCGGTACCGACTACCGTAATTTCCCATCGCAGGCCTATTT TATCGATCCGGAAAATATCGCCAGGGCGGGTTCCTCACCGCTGCTGGAAGTGCCGATGAGCATTCAGTATAAGCATTCGG CACTGATGAATACGCTAAAGCAGGGTTACGATAGCCTGCGTGGCAAACAGCGTTCACCGTCGGTCCACTGGCTGCGGCCC AGCGGCGGTAATCTGGAAAAAATGAAGTCGGTGGCTGAGCAATGTCTAGCGCAGGGGCATGACTACGTTGAGTTTATGCT GCACTCGTCCGAGTTTATGCCCGGCGGCAGCCCGACCTTTAAAACGCAGCAGGATATTGAAGTGTTATATCGTGATTTGG AGCAGCTTTTTGCCTGGCTGCAGCAACGCACGGTGGGTATGACGTTGGCCGAATATTATCAACTTAAAGTGAACTGA
Upstream 100 bases:
>100_bases AGGCCTTCAACGTTGTCCAAACCAGGCAGCGAAGTCGTTTGCCCTGGCGAAACGCCCTGCGTAACATAATGTATATCTAT GGATATCAGGCTTTCTATTT
Downstream 100 bases:
>100_bases GATGTCGAAGCAATGGAAATTAAAGTTGGCGAATGCTTGTCTCCGACTTTATACAAAACTTGGTAGTAATTTTAAAGATA AGCGTTCGTTTGATAAAAGC
Product: WalW protein
Products: NA
Alternate protein names: Deacetylase; Lipopolysaccharide Biosynthesis Protein; Lipopolysaccharide Core Biosynthesis Protein; Lipopolysaccharide Biosynthesis Protein WalW; Lipopolysaccahride Biosynthesis Protein
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MTKPAFLITIDTEGDNLWQNHDRISTENTRFLPRFQALCEKYGFKPVYLTNYEMAVDAEYVEFARDVIARNTGEVGMHLH AWNSPPLTPLTDDDWRHKPYLIEYPADQIRAKVDHMTKLLEDSFQTKMLSHRAGRWAFNEYYAALLLEYGYQVDCSVTPR VNWQYSPGNPQGNGGTDYRNFPSQAYFIDPENIARAGSSPLLEVPMSIQYKHSALMNTLKQGYDSLRGKQRSPSVHWLRP SGGNLEKMKSVAEQCLAQGHDYVEFMLHSSEFMPGGSPTFKTQQDIEVLYRDLEQLFAWLQQRTVGMTLAEYYQLKVN
Sequences:
>Translated_318_residues MTKPAFLITIDTEGDNLWQNHDRISTENTRFLPRFQALCEKYGFKPVYLTNYEMAVDAEYVEFARDVIARNTGEVGMHLH AWNSPPLTPLTDDDWRHKPYLIEYPADQIRAKVDHMTKLLEDSFQTKMLSHRAGRWAFNEYYAALLLEYGYQVDCSVTPR VNWQYSPGNPQGNGGTDYRNFPSQAYFIDPENIARAGSSPLLEVPMSIQYKHSALMNTLKQGYDSLRGKQRSPSVHWLRP SGGNLEKMKSVAEQCLAQGHDYVEFMLHSSEFMPGGSPTFKTQQDIEVLYRDLEQLFAWLQQRTVGMTLAEYYQLKVN >Mature_317_residues TKPAFLITIDTEGDNLWQNHDRISTENTRFLPRFQALCEKYGFKPVYLTNYEMAVDAEYVEFARDVIARNTGEVGMHLHA WNSPPLTPLTDDDWRHKPYLIEYPADQIRAKVDHMTKLLEDSFQTKMLSHRAGRWAFNEYYAALLLEYGYQVDCSVTPRV NWQYSPGNPQGNGGTDYRNFPSQAYFIDPENIARAGSSPLLEVPMSIQYKHSALMNTLKQGYDSLRGKQRSPSVHWLRPS GGNLEKMKSVAEQCLAQGHDYVEFMLHSSEFMPGGSPTFKTQQDIEVLYRDLEQLFAWLQQRTVGMTLAEYYQLKVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36718; Mature: 36587
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKPAFLITIDTEGDNLWQNHDRISTENTRFLPRFQALCEKYGFKPVYLTNYEMAVDAEY CCCCEEEEEEECCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEECHHH VEFARDVIARNTGEVGMHLHAWNSPPLTPLTDDDWRHKPYLIEYPADQIRAKVDHMTKLL HHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHH EDSFQTKMLSHRAGRWAFNEYYAALLLEYGYQVDCSVTPRVNWQYSPGNPQGNGGTDYRN HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCCCCCCCCC FPSQAYFIDPENIARAGSSPLLEVPMSIQYKHSALMNTLKQGYDSLRGKQRSPSVHWLRP CCCCEEEECHHHHHHCCCCCEEECCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC SGGNLEKMKSVAEQCLAQGHDYVEFMLHSSEFMPGGSPTFKTQQDIEVLYRDLEQLFAWL CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QQRTVGMTLAEYYQLKVN HHHHHHHEEEHHEEEECC >Mature Secondary Structure TKPAFLITIDTEGDNLWQNHDRISTENTRFLPRFQALCEKYGFKPVYLTNYEMAVDAEY CCCEEEEEEECCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEECHHH VEFARDVIARNTGEVGMHLHAWNSPPLTPLTDDDWRHKPYLIEYPADQIRAKVDHMTKLL HHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHH EDSFQTKMLSHRAGRWAFNEYYAALLLEYGYQVDCSVTPRVNWQYSPGNPQGNGGTDYRN HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCCCCCCCCC FPSQAYFIDPENIARAGSSPLLEVPMSIQYKHSALMNTLKQGYDSLRGKQRSPSVHWLRP CCCCEEEECHHHHHHCCCCCEEECCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC SGGNLEKMKSVAEQCLAQGHDYVEFMLHSSEFMPGGSPTFKTQQDIEVLYRDLEQLFAWL CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH QQRTVGMTLAEYYQLKVN HHHHHHHEEEHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA