Definition | Serratia proteamaculans 568 chromosome, complete genome. |
---|---|
Accession | NC_009832 |
Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is 157372952
Identifier: 157372952
GI number: 157372952
Start: 5215450
End: 5216262
Strand: Reverse
Name: 157372952
Synonym: Spro_4720
Alternate gene names: NA
Gene position: 5216262-5215450 (Counterclockwise)
Preceding gene: 157372953
Following gene: 157372951
Centisome position: 95.73
GC content: 48.09
Gene sequence:
>813_bases GTGATGAACTACTACCTGTTGGTATTTTCTCTTGTTAGTGGCGTTACCTCTGCATCGCAATATCCGATTGTTACTTCGGT CCAAACGAAAATAATGTCATCAAAGACGGCCAACTATACAGGCACCTTTAGCGTAATGGATATTGGTGCGGCGGCTGATG TTCCGGTACCGGCGGGTTGGACGGTGGGTATAGCCCATCGTCACGACGCTTTTCCTGGCGGCATTGATGTGGTGAGAATG AAGGGGGCTTCCGATGCTTGCGATTCTTATGGATGCTCTATCATTGCACAAAGCAATATGACGTTGGGGCAAGCGGCAAT GTCGGCATATCGAAAATGGGGAGTTAATAGCTTTTCGATAGATCATTCCGGGGAAGGAAATGGCGGGGAATGTATAGGTT TTTTAGCCTCGGCCACACCCAATAGTTCTCATTGGGGGGGGGCAATCATGCCGCCGGGAAGTTGCATTTACGCCCCTCCG GGCCAGGACTGGTGCAAAATCATTACGCCGGAGATAACCTTTAATCACGGCGTACTGAGCTTCAGTGATGCGGCGGGGCA CAGTCGTTCAACGCAGGTAAATATTAACTGCACCGTAGGCACCACCGTTAAACTTCGCCTGTTAAATAATGAATCCTTTA TAGATCTGAAAAATGGTCTTCGAGGCGATATCTTTATAGAAGGGAAACCCCCGACCGTTAATCTAAAACTCCAGACTGGA AATAACACGGTCAATATGAGCGACAAACTGAGCGGTGAAATAAAACCAGGCTCATTCTATGGTGCTAGCGTGCTTGTTAT AGAGCCGATTTGA
Upstream 100 bases:
>100_bases CCGCACGCCGCTGGTGGCGGGCGCTTATTCGGCTTCGGTAGATTTTCGGTTGAGTTATGACTGATGGTGTTATGGCGATT TTATTTCAGGGAGGAATAGA
Downstream 100 bases:
>100_bases TGCCAGACAGGGAGCCACTTCATTAGGATAAATGAAAGGGTACTTCCGGATTAAGATAATGCATAAGTGCTGAAGGGTAG GGTGGAAAATAAAATGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MMNYYLLVFSLVSGVTSASQYPIVTSVQTKIMSSKTANYTGTFSVMDIGAAADVPVPAGWTVGIAHRHDAFPGGIDVVRM KGASDACDSYGCSIIAQSNMTLGQAAMSAYRKWGVNSFSIDHSGEGNGGECIGFLASATPNSSHWGGAIMPPGSCIYAPP GQDWCKIITPEITFNHGVLSFSDAAGHSRSTQVNINCTVGTTVKLRLLNNESFIDLKNGLRGDIFIEGKPPTVNLKLQTG NNTVNMSDKLSGEIKPGSFYGASVLVIEPI
Sequences:
>Translated_270_residues MMNYYLLVFSLVSGVTSASQYPIVTSVQTKIMSSKTANYTGTFSVMDIGAAADVPVPAGWTVGIAHRHDAFPGGIDVVRM KGASDACDSYGCSIIAQSNMTLGQAAMSAYRKWGVNSFSIDHSGEGNGGECIGFLASATPNSSHWGGAIMPPGSCIYAPP GQDWCKIITPEITFNHGVLSFSDAAGHSRSTQVNINCTVGTTVKLRLLNNESFIDLKNGLRGDIFIEGKPPTVNLKLQTG NNTVNMSDKLSGEIKPGSFYGASVLVIEPI >Mature_270_residues MMNYYLLVFSLVSGVTSASQYPIVTSVQTKIMSSKTANYTGTFSVMDIGAAADVPVPAGWTVGIAHRHDAFPGGIDVVRM KGASDACDSYGCSIIAQSNMTLGQAAMSAYRKWGVNSFSIDHSGEGNGGECIGFLASATPNSSHWGGAIMPPGSCIYAPP GQDWCKIITPEITFNHGVLSFSDAAGHSRSTQVNINCTVGTTVKLRLLNNESFIDLKNGLRGDIFIEGKPPTVNLKLQTG NNTVNMSDKLSGEIKPGSFYGASVLVIEPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28483; Mature: 28483
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNYYLLVFSLVSGVTSASQYPIVTSVQTKIMSSKTANYTGTFSVMDIGAAADVPVPAGW CCCCEEEHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCC TVGIAHRHDAFPGGIDVVRMKGASDACDSYGCSIIAQSNMTLGQAAMSAYRKWGVNSFSI EEEEEECCCCCCCCEEEEEECCCCCCCHHCCCEEEEECCCCHHHHHHHHHHHCCCCEEEE DHSGEGNGGECIGFLASATPNSSHWGGAIMPPGSCIYAPPGQDWCKIITPEITFNHGVLS CCCCCCCCCEEEEEEEECCCCCCCCCCEECCCCCEEECCCCCCCEEEECCEEEECCCEEE FSDAAGHSRSTQVNINCTVGTTVKLRLLNNESFIDLKNGLRGDIFIEGKPPTVNLKLQTG ECCCCCCCCCEEEEEEEEECCEEEEEEECCCCEEEECCCCCCCEEEECCCCEEEEEEECC NNTVNMSDKLSGEIKPGSFYGASVLVIEPI CCEEEECHHCCCEECCCCCCCEEEEEEECC >Mature Secondary Structure MMNYYLLVFSLVSGVTSASQYPIVTSVQTKIMSSKTANYTGTFSVMDIGAAADVPVPAGW CCCCEEEHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCC TVGIAHRHDAFPGGIDVVRMKGASDACDSYGCSIIAQSNMTLGQAAMSAYRKWGVNSFSI EEEEEECCCCCCCCEEEEEECCCCCCCHHCCCEEEEECCCCHHHHHHHHHHHCCCCEEEE DHSGEGNGGECIGFLASATPNSSHWGGAIMPPGSCIYAPPGQDWCKIITPEITFNHGVLS CCCCCCCCCEEEEEEEECCCCCCCCCCEECCCCCEEECCCCCCCEEEECCEEEECCCEEE FSDAAGHSRSTQVNINCTVGTTVKLRLLNNESFIDLKNGLRGDIFIEGKPPTVNLKLQTG ECCCCCCCCCEEEEEEEEECCEEEEEEECCCCEEEECCCCCCCEEEECCCCEEEEEEECC NNTVNMSDKLSGEIKPGSFYGASVLVIEPI CCEEEECHHCCCEECCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA