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The map label for this gene is yfcR [H]

Identifier: 157372951

GI number: 157372951

Start: 5214850

End: 5215356

Strand: Reverse

Name: yfcR [H]

Synonym: Spro_4719

Alternate gene names: 157372951

Gene position: 5215356-5214850 (Counterclockwise)

Preceding gene: 157372952

Following gene: 157372950

Centisome position: 95.71

GC content: 47.14

Gene sequence:

>507_bases
ATGGATAAGATGAAATATTCTATTCTTGATTTTTGTATTATTTTCGCGGCCGTTTGCTTTTTCGCCGTGTTCAGTATGGG
TAGCCGTGCTGCTACGCCCATCAATATTTCTGGCACTATTATGGCGCCACCGCCCTGCGTAATTAACGGCGAAAAAACCA
TTATGGTGGATTTTGGTGAAAATGTGGTGATTTCACGCATTGATGGCAGTAATTACCTGACAACCATCAAGTACACGCTC
GAGTGCAAAGAGCAGACAAAAAATGCCATGAAGCTGATGATTGCCGGTACCGCAGCGGGATTTAACAGTGATCTTATACA
GACTTTTCGAACAGATCTGGGAATTGCGCTGAAACAAAATGGCCAGCCGCTCCGGGTCAACCAGTGGATGAATTTTAATT
ACCCGGCACAACCCGTATTGCAGGCGGTACCGGTGAAAAAACCTGGCGCGGATCTGCCGACGGGCGGATTTTTCGCCGGA
GCGACCTTAAAGGTGGACTATCAGTGA

Upstream 100 bases:

>100_bases
GATTTGATGCCAGACAGGGAGCCACTTCATTAGGATAAATGAAAGGGTACTTCCGGATTAAGATAATGCATAAGTGCTGA
AGGGTAGGGTGGAAAATAAA

Downstream 100 bases:

>100_bases
ATAAAAAATACGCGATATTCGCCTTGCTGGCTGCCGTATCGACTTTATCGGTAACGCTGCCCATTCAGGCGATAGAGATA
CTTTTTAACGGTCGTTTAGT

Product: MrfE protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MDKMKYSILDFCIIFAAVCFFAVFSMGSRAATPINISGTIMAPPPCVINGEKTIMVDFGENVVISRIDGSNYLTTIKYTL
ECKEQTKNAMKLMIAGTAAGFNSDLIQTFRTDLGIALKQNGQPLRVNQWMNFNYPAQPVLQAVPVKKPGADLPTGGFFAG
ATLKVDYQ

Sequences:

>Translated_168_residues
MDKMKYSILDFCIIFAAVCFFAVFSMGSRAATPINISGTIMAPPPCVINGEKTIMVDFGENVVISRIDGSNYLTTIKYTL
ECKEQTKNAMKLMIAGTAAGFNSDLIQTFRTDLGIALKQNGQPLRVNQWMNFNYPAQPVLQAVPVKKPGADLPTGGFFAG
ATLKVDYQ
>Mature_168_residues
MDKMKYSILDFCIIFAAVCFFAVFSMGSRAATPINISGTIMAPPPCVINGEKTIMVDFGENVVISRIDGSNYLTTIKYTL
ECKEQTKNAMKLMIAGTAAGFNSDLIQTFRTDLGIALKQNGQPLRVNQWMNFNYPAQPVLQAVPVKKPGADLPTGGFFAG
ATLKVDYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788676, Length=164, Percent_Identity=34.1463414634146, Blast_Score=89, Evalue=1e-19,
Organism=Escherichia coli, GI1788675, Length=150, Percent_Identity=36, Blast_Score=88, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18332; Mature: 18332

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKMKYSILDFCIIFAAVCFFAVFSMGSRAATPINISGTIMAPPPCVINGEKTIMVDFGE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCEEEECCCCEEECCCEEEEEECCC
NVVISRIDGSNYLTTIKYTLECKEQTKNAMKLMIAGTAAGFNSDLIQTFRTDLGIALKQN
CEEEEEECCCCEEEEEEEEEEEHHHHCCEEEEEEEECCCCCCHHHHHHHHHHCCEEEECC
GQPLRVNQWMNFNYPAQPVLQAVPVKKPGADLPTGGFFAGATLKVDYQ
CCEEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCEEECEEEEEECC
>Mature Secondary Structure
MDKMKYSILDFCIIFAAVCFFAVFSMGSRAATPINISGTIMAPPPCVINGEKTIMVDFGE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCEEEECCCCEEECCCEEEEEECCC
NVVISRIDGSNYLTTIKYTLECKEQTKNAMKLMIAGTAAGFNSDLIQTFRTDLGIALKQN
CEEEEEECCCCEEEEEEEEEEEHHHHCCEEEEEEEECCCCCCHHHHHHHHHHCCEEEECC
GQPLRVNQWMNFNYPAQPVLQAVPVKKPGADLPTGGFFAGATLKVDYQ
CCEEEEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCEEECEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]