Click here to switch to the map view.

The map label for this gene is fimF [C]

Identifier: 157372953

GI number: 157372953

Start: 5216299

End: 5216961

Strand: Reverse

Name: fimF [C]

Synonym: Spro_4721

Alternate gene names: 157372953

Gene position: 5216961-5216299 (Counterclockwise)

Preceding gene: 157372954

Following gene: 157372952

Centisome position: 95.74

GC content: 64.1

Gene sequence:

>663_bases
ATGCAACGAATAAGCAAAAAATGGAGTCAACACCTGCCGGGTTACCGCGACTGGCAGTACTACGGCACCCTGGGTGCATT
GGCGCTGATGGCCCCGATCACACTTGGCACGCTGCTGCTGTTGCTGCCGAATGCTCACGGGCAGGCGGTGGATAATTGGT
ATACCGACGGCGCTAACGGCGTGCTGCAGGTACGCGGTGCATTGACCGAGAGCGCCTGTCGGCTGGAGATGAGCAGTGCG
CGCCAGGATATTCAACTGGGCGAGACCGGCACCGGCCGGCTGCAAAACGTTGGTGACCGGGGCACGCCGGTGGGTTTTGA
ACTGCGTTTGCAGGATTGTCTGCGCAGCCCGGCGGGCAGCCGCGACAGCCGCACCGGTGCGCTGACCTGGGCGGCGCAGC
AGCCGGCGGTGACGGTAAGCTTCAGCGCCCCGGCGGACGTTAACAATCCGCAACTGGTGAAGGTGCAGGGCGTCTCCGGG
CTGGCATTGCGAATGACCGATCCGTTGGGGCAGGATGTGCGGCTGGGTAGCCGCGGACAACCGCTGCTGCTGACGCCGGG
GCAGAACACGCTGGCGTACCATGTGGCGCCGGAACGCACCCGCACGCCGCTGGTGGCGGGCGCTTATTCGGCTTCGGTAG
ATTTTCGGTTGAGTTATGACTGA

Upstream 100 bases:

>100_bases
CGCTGACCTTTAACTGCAGCGGCGGCAGTTGTCAGGTGGTGCCGGAGAAAGACAAGTCATAAAGCCGTAAGTCAGGGGCA
GGTGAACAGGAGGAAAGGCT

Downstream 100 bases:

>100_bases
TGGTGTTATGGCGATTTTATTTCAGGGAGGAATAGAGTGATGAACTACTACCTGTTGGTATTTTCTCTTGTTAGTGGCGT
TACCTCTGCATCGCAATATC

Product: fimbrial protein

Products: NA

Alternate protein names: MrfX Protein; Type-1 Fimbrial Protein; Fimbrial Subunit; Adaptor/Initiator MrfE Protein; Exported Fimbrial Protein; Type-1 Fimbrial Protein A Chain

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MQRISKKWSQHLPGYRDWQYYGTLGALALMAPITLGTLLLLLPNAHGQAVDNWYTDGANGVLQVRGALTESACRLEMSSA
RQDIQLGETGTGRLQNVGDRGTPVGFELRLQDCLRSPAGSRDSRTGALTWAAQQPAVTVSFSAPADVNNPQLVKVQGVSG
LALRMTDPLGQDVRLGSRGQPLLLTPGQNTLAYHVAPERTRTPLVAGAYSASVDFRLSYD

Sequences:

>Translated_220_residues
MQRISKKWSQHLPGYRDWQYYGTLGALALMAPITLGTLLLLLPNAHGQAVDNWYTDGANGVLQVRGALTESACRLEMSSA
RQDIQLGETGTGRLQNVGDRGTPVGFELRLQDCLRSPAGSRDSRTGALTWAAQQPAVTVSFSAPADVNNPQLVKVQGVSG
LALRMTDPLGQDVRLGSRGQPLLLTPGQNTLAYHVAPERTRTPLVAGAYSASVDFRLSYD
>Mature_220_residues
MQRISKKWSQHLPGYRDWQYYGTLGALALMAPITLGTLLLLLPNAHGQAVDNWYTDGANGVLQVRGALTESACRLEMSSA
RQDIQLGETGTGRLQNVGDRGTPVGFELRLQDCLRSPAGSRDSRTGALTWAAQQPAVTVSFSAPADVNNPQLVKVQGVSG
LALRMTDPLGQDVRLGSRGQPLLLTPGQNTLAYHVAPERTRTPLVAGAYSASVDFRLSYD

Specific function: Involved In Regulation Of Length And Mediation Of Adhesion Of Type 1 Fimbriae (But Not Necessary For The Production Of Fimbriae). Involved In The Integration Of Fimh In The Fimbriae. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23688; Mature: 23688

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRISKKWSQHLPGYRDWQYYGTLGALALMAPITLGTLLLLLPNAHGQAVDNWYTDGANG
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEECCCCCC
VLQVRGALTESACRLEMSSARQDIQLGETGTGRLQNVGDRGTPVGFELRLQDCLRSPAGS
EEEEECHHHHHHHHHHHHHCCCCEECCCCCCCHHCCCCCCCCCCEEEEEHHHHHCCCCCC
RDSRTGALTWAAQQPAVTVSFSAPADVNNPQLVKVQGVSGLALRMTDPLGQDVRLGSRGQ
CCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCCCEEECCCCC
PLLLTPGQNTLAYHVAPERTRTPLVAGAYSASVDFRLSYD
EEEEECCCCEEEEEECCCCCCCCEEEEEEECEEEEEEECC
>Mature Secondary Structure
MQRISKKWSQHLPGYRDWQYYGTLGALALMAPITLGTLLLLLPNAHGQAVDNWYTDGANG
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEECCCCCC
VLQVRGALTESACRLEMSSARQDIQLGETGTGRLQNVGDRGTPVGFELRLQDCLRSPAGS
EEEEECHHHHHHHHHHHHHCCCCEECCCCCCCHHCCCCCCCCCCEEEEEHHHHHCCCCCC
RDSRTGALTWAAQQPAVTVSFSAPADVNNPQLVKVQGVSGLALRMTDPLGQDVRLGSRGQ
CCCCCEEEEEECCCCEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCCCEEECCCCC
PLLLTPGQNTLAYHVAPERTRTPLVAGAYSASVDFRLSYD
EEEEECCCCEEEEEECCCCCCCCEEEEEEECEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA