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The map label for this gene is siaT [H]

Identifier: 157372936

GI number: 157372936

Start: 5199330

End: 5199800

Strand: Reverse

Name: siaT [H]

Synonym: Spro_4704

Alternate gene names: 157372936

Gene position: 5199800-5199330 (Counterclockwise)

Preceding gene: 157372937

Following gene: 157372935

Centisome position: 95.43

GC content: 53.5

Gene sequence:

>471_bases
ATGATCCGAAAGTTATTGGTTAATCTTGACGATATTCTCGCCTGCCTGGTGTTGACTGCGATTGTGGCGATAACGGTACT
GGCGGTAGTGATGCGTTACCTGGTGCATGCGCCGTTGCCCTGGGTGGAAGAGCTGCAATTAGCGCTCTATCTGTGGGCCA
TTATGCTGGGGGCGGTCAGCGCAATGAAGCGGCGCAAGCATGTCGGCATTGATGTTTTTGTCAATCTGTTGCCCGCAAGT
GCCCGCCGGCTGGTGCTTTATTGGAACGATGCCTTGAGCATAGTTGTCTTGCTGTCGTTTGCCTGGCTTGGTTTGATGCT
GGCGGAAGGTGCGGGAGAAAAGATCACCCCGATCCTCGGTATTCGTTACCGCTGGATCGATATGGCGATCCCGGTGGGGT
CATTGCTGATGGTGCTGCAATTGGTCGTCAACCTATGTTACCGCGACAAACGCATGGGAGAATCATCATGA

Upstream 100 bases:

>100_bases
ATGGACGCCGGGATTATATGAAAAGCTTCAGGGCTATTTAGAATAATTGACTGCCATTTTTCGACAACTTCCGCTGCATC
GCACCGGGGGAGTAATAATC

Downstream 100 bases:

>100_bases
CGGTAGCGATCTCCTGCATTATTTTACTGCTGGGTTTTATCAGCAAATTACCGATATTTATCAGTGTGATCCTGGCGGTA
TTGAGTTGGTTTTTCCTCGC

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: N-acetylneuraminic acid permease; N-acetylneuraminic acid transporter; Neu5Ac permease [H]

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MIRKLLVNLDDILACLVLTAIVAITVLAVVMRYLVHAPLPWVEELQLALYLWAIMLGAVSAMKRRKHVGIDVFVNLLPAS
ARRLVLYWNDALSIVVLLSFAWLGLMLAEGAGEKITPILGIRYRWIDMAIPVGSLLMVLQLVVNLCYRDKRMGESS

Sequences:

>Translated_156_residues
MIRKLLVNLDDILACLVLTAIVAITVLAVVMRYLVHAPLPWVEELQLALYLWAIMLGAVSAMKRRKHVGIDVFVNLLPAS
ARRLVLYWNDALSIVVLLSFAWLGLMLAEGAGEKITPILGIRYRWIDMAIPVGSLLMVLQLVVNLCYRDKRMGESS
>Mature_156_residues
MIRKLLVNLDDILACLVLTAIVAITVLAVVMRYLVHAPLPWVEELQLALYLWAIMLGAVSAMKRRKHVGIDVFVNLLPAS
ARRLVLYWNDALSIVVLLSFAWLGLMLAEGAGEKITPILGIRYRWIDMAIPVGSLLMVLQLVVNLCYRDKRMGESS

Specific function: Part of the tripartite ATP-independent periplasmic (TRAP) transport system siaPT involved in the uptake of sialic acid [H]

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the TRAP transporter large permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR007387
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM; PF04290 DctQ [H]

EC number: NA

Molecular weight: Translated: 17470; Mature: 17470

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRKLLVNLDDILACLVLTAIVAITVLAVVMRYLVHAPLPWVEELQLALYLWAIMLGAVS
CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
AMKRRKHVGIDVFVNLLPASARRLVLYWNDALSIVVLLSFAWLGLMLAEGAGEKITPILG
HHHHHHHCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
IRYRWIDMAIPVGSLLMVLQLVVNLCYRDKRMGESS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIRKLLVNLDDILACLVLTAIVAITVLAVVMRYLVHAPLPWVEELQLALYLWAIMLGAVS
CHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
AMKRRKHVGIDVFVNLLPASARRLVLYWNDALSIVVLLSFAWLGLMLAEGAGEKITPILG
HHHHHHHCCHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
IRYRWIDMAIPVGSLLMVLQLVVNLCYRDKRMGESS
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]