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The map label for this gene is yrfG [H]

Identifier: 157372846

GI number: 157372846

Start: 5090734

End: 5091411

Strand: Direct

Name: yrfG [H]

Synonym: Spro_4614

Alternate gene names: 157372846

Gene position: 5090734-5091411 (Clockwise)

Preceding gene: 157372845

Following gene: 157372847

Centisome position: 93.43

GC content: 53.98

Gene sequence:

>678_bases
ATGGTTCCCGAGTTTGACTGGAGTGAGATTGATACCGTGCTGCTGGATATGGACGGTACCCTGCTCGATCTGGAGTTCGA
CAGCCACTTTTGGCTTAGCCTGGTGCCACAGGCCCTGAGCGAGCAGCGGGCTATTCCCTTCGATGAAGCGCGTAAAATTA
TTCATCAGGAATATCTGGCCGTACAGCACACCATGAACTGGTACTGCTTCGATTACTGGAGCGAACGGCTGGATATGGAT
ATTTACCGCATGACCAGCGAGGTAGGCAACCGTGCTCGTCTGCGTGAAGATACCGAGCCGTTTTTACAAGCATTACGTGC
GGCGGGCCACCAGACGATTTTGTTGACCAACGCCCATCCGCACAGCCTGGCGGTAAAAATTGAGCATACCGGTTTGGATC
GGCACCTTGATTTATTACTTTCCACCCACACATTTGGTTATCCGAAAGAAGATCAGCGTTTGTGGCAGGCAGTGCAGCAA
CACACCGGTTTTGATCCGCAGCGTACGCTGTTTGTCGACGACGGCGAACCGATACTGGATGCCGCCCGTACCTTCGGTAT
TCGCTACTGCCTGGGCGTGCAAAACCCGGATTCCAGCATGGCGGAGAAAACCTTCCAGCATTACCCATCGATGCGCGATT
ACCGCCTGTTGATACCGGCGCTGGCCAGGGGGAATTGA

Upstream 100 bases:

>100_bases
GAGCCACTAGCCCCGGCCTGCGCCCTGTCATCAGCTTATGCTACGCTAACGCTATTCCCCTTATCCTGCGGACCGCCGAA
GGTTCGCCTATGGAGTTTTC

Downstream 100 bases:

>100_bases
TGAAAGGAAAAGCAACAGGCGACGAAGCCGTCCGGCTGGACAAGTGGCTATGGGCGGCACGTTTCTATAAGACCCGCGCA
CTGGCACGGGAGATGATCGA

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MVPEFDWSEIDTVLLDMDGTLLDLEFDSHFWLSLVPQALSEQRAIPFDEARKIIHQEYLAVQHTMNWYCFDYWSERLDMD
IYRMTSEVGNRARLREDTEPFLQALRAAGHQTILLTNAHPHSLAVKIEHTGLDRHLDLLLSTHTFGYPKEDQRLWQAVQQ
HTGFDPQRTLFVDDGEPILDAARTFGIRYCLGVQNPDSSMAEKTFQHYPSMRDYRLLIPALARGN

Sequences:

>Translated_225_residues
MVPEFDWSEIDTVLLDMDGTLLDLEFDSHFWLSLVPQALSEQRAIPFDEARKIIHQEYLAVQHTMNWYCFDYWSERLDMD
IYRMTSEVGNRARLREDTEPFLQALRAAGHQTILLTNAHPHSLAVKIEHTGLDRHLDLLLSTHTFGYPKEDQRLWQAVQQ
HTGFDPQRTLFVDDGEPILDAARTFGIRYCLGVQNPDSSMAEKTFQHYPSMRDYRLLIPALARGN
>Mature_225_residues
MVPEFDWSEIDTVLLDMDGTLLDLEFDSHFWLSLVPQALSEQRAIPFDEARKIIHQEYLAVQHTMNWYCFDYWSERLDMD
IYRMTSEVGNRARLREDTEPFLQALRAAGHQTILLTNAHPHSLAVKIEHTGLDRHLDLLLSTHTFGYPKEDQRLWQAVQQ
HTGFDPQRTLFVDDGEPILDAARTFGIRYCLGVQNPDSSMAEKTFQHYPSMRDYRLLIPALARGN

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082259, Length=215, Percent_Identity=66.5116279069767, Blast_Score=305, Evalue=1e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006402
- InterPro:   IPR005833 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 26206; Mature: 26206

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPEFDWSEIDTVLLDMDGTLLDLEFDSHFWLSLVPQALSEQRAIPFDEARKIIHQEYLA
CCCCCCCHHHCEEEEECCCEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VQHTMNWYCFDYWSERLDMDIYRMTSEVGNRARLREDTEPFLQALRAAGHQTILLTNAHP
HHHHCCCEEHHHHHHHHCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCCEEEEECCCC
HSLAVKIEHTGLDRHLDLLLSTHTFGYPKEDQRLWQAVQQHTGFDPQRTLFVDDGEPILD
CEEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHH
AARTFGIRYCLGVQNPDSSMAEKTFQHYPSMRDYRLLIPALARGN
HHHHHCEEEEEECCCCCHHHHHHHHHHCCCCCCHHEEEHHHCCCC
>Mature Secondary Structure
MVPEFDWSEIDTVLLDMDGTLLDLEFDSHFWLSLVPQALSEQRAIPFDEARKIIHQEYLA
CCCCCCCHHHCEEEEECCCEEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VQHTMNWYCFDYWSERLDMDIYRMTSEVGNRARLREDTEPFLQALRAAGHQTILLTNAHP
HHHHCCCEEHHHHHHHHCHHHHHHHHHHCCHHHCCCCHHHHHHHHHHCCCCEEEEECCCC
HSLAVKIEHTGLDRHLDLLLSTHTFGYPKEDQRLWQAVQQHTGFDPQRTLFVDDGEPILD
CEEEEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHH
AARTFGIRYCLGVQNPDSSMAEKTFQHYPSMRDYRLLIPALARGN
HHHHHCEEEEEECCCCCHHHHHHHHHHCCCCCCHHEEEHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]