Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

Click here to switch to the map view.

The map label for this gene is eda [H]

Identifier: 157372733

GI number: 157372733

Start: 4986654

End: 4987295

Strand: Direct

Name: eda [H]

Synonym: Spro_4500

Alternate gene names: 157372733

Gene position: 4986654-4987295 (Clockwise)

Preceding gene: 157372732

Following gene: 157372738

Centisome position: 91.52

GC content: 60.9

Gene sequence:

>642_bases
ATGAACAATTGGAAGACAAGCGCAGAGCAGATCCTGATGGCAGGACCGGTAGTCCCGGTGATCGTCATCAACAAACTGGA
ACATGCTGTGCCGTTGGCGAAAGCCCTGGTCGCCGGGGGTGTGCGGGTATTGGAAGTGACACTGCGCACCGCCTGCGCGA
TGGACGCGATCCGTGCGATTGCCAAAGAAGTGCCAGACGCGATTATCGGTGCCGGCACGGTTATTAATCCCCAGCAACTG
CAGGAAGTCACCGACGCCGGCGCACAGTTCGCCATCAGCCCAGGCCTGACCGCCGATCTGCTGAAAGCGGCCACTGCCGG
TTCGATCCCGTTGATTCCCGGTATCTGCACCGTGTCGGAACTGATGCTGGGCATGGATCACGGCCTGCGTGAGTTTAAAT
TCTTCCCGGCTGAAGCCAACGGCGGCGTGAAAGCGCTGCAGGCCATCAGCGGCCCCTTCCCGCAGGTGCGCTTTTGCCCA
ACCGGCGGCATCTCACCGAACAACTACCGTGACTATCTGGCGCTGAAAAGCGTGCTGTGCATCGGCGGCTCCTGGCTGGT
ACCGGCAGATGCACTGGAAAGCGGTGACTACGCCCGCATTACCGAATTGGCGCGCGCCGCCGTTGCGGGTGCAAAAGCGT
AA

Upstream 100 bases:

>100_bases
AGCTTTCCGGTGCCGAACAGGGTGCCTGCTGCATTAAATTTTAACCGATAGCATGGCCGTACAGCCCGACGGCGGCGGCC
ATAACTGGAGAAAACCGTTA

Downstream 100 bases:

>100_bases
TCTTGCCGGGCGCGGTAATGAACCGCGCCCTTATGCCGTAGCCGATGTCGCGGGCAGCGCCGCACCACTACGCTGGCTGA
AGCGCCGTTTTTTGCGGTAA

Product: keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase

Products: NA

Alternate protein names: 4-hydroxy-2-oxoglutarate aldolase; 2-keto-4-hydroxyglutarate aldolase; KHG-aldolase; 2-dehydro-3-deoxy-phosphogluconate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG-aldolase; Phospho-2-dehydro-3-deoxygluconate aldolase; Phospho-2-keto-3-deoxygluconate aldolase [H]

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MNNWKTSAEQILMAGPVVPVIVINKLEHAVPLAKALVAGGVRVLEVTLRTACAMDAIRAIAKEVPDAIIGAGTVINPQQL
QEVTDAGAQFAISPGLTADLLKAATAGSIPLIPGICTVSELMLGMDHGLREFKFFPAEANGGVKALQAISGPFPQVRFCP
TGGISPNNYRDYLALKSVLCIGGSWLVPADALESGDYARITELARAAVAGAKA

Sequences:

>Translated_213_residues
MNNWKTSAEQILMAGPVVPVIVINKLEHAVPLAKALVAGGVRVLEVTLRTACAMDAIRAIAKEVPDAIIGAGTVINPQQL
QEVTDAGAQFAISPGLTADLLKAATAGSIPLIPGICTVSELMLGMDHGLREFKFFPAEANGGVKALQAISGPFPQVRFCP
TGGISPNNYRDYLALKSVLCIGGSWLVPADALESGDYARITELARAAVAGAKA
>Mature_213_residues
MNNWKTSAEQILMAGPVVPVIVINKLEHAVPLAKALVAGGVRVLEVTLRTACAMDAIRAIAKEVPDAIIGAGTVINPQQL
QEVTDAGAQFAISPGLTADLLKAATAGSIPLIPGICTVSELMLGMDHGLREFKFFPAEANGGVKALQAISGPFPQVRFCP
TGGISPNNYRDYLALKSVLCIGGSWLVPADALESGDYARITELARAAVAGAKA

Specific function: KEY ENZYME IN THE ENTNER-DOUDOROFF PATHWAY. PARTICIPATES IN THE REGULATION OF THE INTRACELLULAR LEVEL OF GLYOXYLATE. [C]

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the KHG/KDPG aldolase family [H]

Homologues:

Organism=Escherichia coli, GI1788156, Length=212, Percent_Identity=86.3207547169811, Blast_Score=353, Evalue=4e-99,
Organism=Escherichia coli, GI48994954, Length=175, Percent_Identity=25.7142857142857, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000887
- InterPro:   IPR013785 [H]

Pfam domain/function: PF01081 Aldolase [H]

EC number: =4.1.3.16; =4.1.2.14 [H]

Molecular weight: Translated: 22100; Mature: 22100

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00159 ALDOLASE_KDPG_KHG_1 ; PS00160 ALDOLASE_KDPG_KHG_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNWKTSAEQILMAGPVVPVIVINKLEHAVPLAKALVAGGVRVLEVTLRTACAMDAIRAI
CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AKEVPDAIIGAGTVINPQQLQEVTDAGAQFAISPGLTADLLKAATAGSIPLIPGICTVSE
HHHCCHHHHCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHH
LMLGMDHGLREFKFFPAEANGGVKALQAISGPFPQVRFCPTGGISPNNYRDYLALKSVLC
HHHHHHCCHHHHEECCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHH
IGGSWLVPADALESGDYARITELARAAVAGAKA
HCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNNWKTSAEQILMAGPVVPVIVINKLEHAVPLAKALVAGGVRVLEVTLRTACAMDAIRAI
CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
AKEVPDAIIGAGTVINPQQLQEVTDAGAQFAISPGLTADLLKAATAGSIPLIPGICTVSE
HHHCCHHHHCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHH
LMLGMDHGLREFKFFPAEANGGVKALQAISGPFPQVRFCPTGGISPNNYRDYLALKSVLC
HHHHHHCCHHHHEECCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHHH
IGGSWLVPADALESGDYARITELARAAVAGAKA
HCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8145647 [H]