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The map label for this gene is yrdA [H]

Identifier: 157372738

GI number: 157372738

Start: 4999527

End: 5000069

Strand: Direct

Name: yrdA [H]

Synonym: Spro_4505

Alternate gene names: 157372738

Gene position: 4999527-5000069 (Clockwise)

Preceding gene: 157372733

Following gene: 157372744

Centisome position: 91.75

GC content: 51.2

Gene sequence:

>543_bases
ATGTCTGATGCAGTACGTTCTTACCTTCATTACTCTCCTAAACTGGGCCTGCGCGTCATGATCGACCCTTCCAGTGTGGT
GATCGGTAACGTTGAGCTGGCCGATGACGTCAGTATCTGGCCGTTGGTTGCTATCCGCGGAGATGTGAACGCAGTAAAAA
TCGGTGCACGCAGCAATATTCAGGATGGCAGCGTGTTGCACGTAACTCATAAGTCTGAATATAACCCTGAGGGTTACCCA
TTATTGATCGGTGAAGACGTTACTGTTGGGCACAAGGCCATGTTGCATGGCTGCGCGATTGGCAATCGGGTGCTGGTAGG
TATGGGATCGATCCTGTTGGATGGTGCAGTAATAGAAGATGATGTGATGATTGGTGCCGGCAGCCTGGTTGCACCGGGTA
AACGCCTGGAGAGCGGTTATCTCTATATGGGCAGCCCGGCACGCCAGGTTCGCCCATTGACCGCTGCGGAACGGGAAGGG
TTGCTTTACTCTTCTACTAACTATGTACGTTGGAAAGACGAATATTTGTCAGAGGATATCTGA

Upstream 100 bases:

>100_bases
AGGGCCGTTTTCCGCAGGATCCATCACTTCAGTTGGTTGTAATTCCACCACCAACGTCTAGTATTGCCGGTAAATATGAT
CCCGATGCGAGGCTATTACC

Downstream 100 bases:

>100_bases
CAGGCGCCCGTTCCCGCTCAGGGGAACGGGCTCAGAGTTACACTGCCAGTTCGTGACGCAGCTGGCGCAATACCGGTTCG
ATCTCCGGCATCACACCATG

Product: putative transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MSDAVRSYLHYSPKLGLRVMIDPSSVVIGNVELADDVSIWPLVAIRGDVNAVKIGARSNIQDGSVLHVTHKSEYNPEGYP
LLIGEDVTVGHKAMLHGCAIGNRVLVGMGSILLDGAVIEDDVMIGAGSLVAPGKRLESGYLYMGSPARQVRPLTAAEREG
LLYSSTNYVRWKDEYLSEDI

Sequences:

>Translated_180_residues
MSDAVRSYLHYSPKLGLRVMIDPSSVVIGNVELADDVSIWPLVAIRGDVNAVKIGARSNIQDGSVLHVTHKSEYNPEGYP
LLIGEDVTVGHKAMLHGCAIGNRVLVGMGSILLDGAVIEDDVMIGAGSLVAPGKRLESGYLYMGSPARQVRPLTAAEREG
LLYSSTNYVRWKDEYLSEDI
>Mature_179_residues
SDAVRSYLHYSPKLGLRVMIDPSSVVIGNVELADDVSIWPLVAIRGDVNAVKIGARSNIQDGSVLHVTHKSEYNPEGYPL
LIGEDVTVGHKAMLHGCAIGNRVLVGMGSILLDGAVIEDDVMIGAGSLVAPGKRLESGYLYMGSPARQVRPLTAAEREGL
LYSSTNYVRWKDEYLSEDI

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=178, Percent_Identity=74.1573033707865, Blast_Score=275, Evalue=2e-75,
Organism=Escherichia coli, GI87081681, Length=154, Percent_Identity=38.3116883116883, Blast_Score=102, Evalue=1e-23,
Organism=Escherichia coli, GI1787667, Length=149, Percent_Identity=34.8993288590604, Blast_Score=98, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19453; Mature: 19321

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDAVRSYLHYSPKLGLRVMIDPSSVVIGNVELADDVSIWPLVAIRGDVNAVKIGARSNI
CCHHHHHHHHCCCCCCEEEEECCCEEEEEEEEECCCCCEEEEEEEECCCCEEEECCCCCC
QDGSVLHVTHKSEYNPEGYPLLIGEDVTVGHKAMLHGCAIGNRVLVGMGSILLDGAVIED
CCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCCHHCCCEEEEC
DVMIGAGSLVAPGKRLESGYLYMGSPARQVRPLTAAEREGLLYSSTNYVRWKDEYLSEDI
CEEEECCCEECCCCCCCCCEEEECCCHHHCCCCCCHHCCCEEEECCCEEEECHHHHCCCC
>Mature Secondary Structure 
SDAVRSYLHYSPKLGLRVMIDPSSVVIGNVELADDVSIWPLVAIRGDVNAVKIGARSNI
CHHHHHHHHCCCCCCEEEEECCCEEEEEEEEECCCCCEEEEEEEECCCCEEEECCCCCC
QDGSVLHVTHKSEYNPEGYPLLIGEDVTVGHKAMLHGCAIGNRVLVGMGSILLDGAVIED
CCCCEEEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCCHHCCCEEEEC
DVMIGAGSLVAPGKRLESGYLYMGSPARQVRPLTAAEREGLLYSSTNYVRWKDEYLSEDI
CEEEECCCEECCCCCCCCCEEEECCCHHHCCCCCCHHCCCEEEECCCEEEECHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]