| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is gntU [H]
Identifier: 157372731
GI number: 157372731
Start: 4983336
End: 4984673
Strand: Direct
Name: gntU [H]
Synonym: Spro_4498
Alternate gene names: 157372731
Gene position: 4983336-4984673 (Clockwise)
Preceding gene: 157372730
Following gene: 157372732
Centisome position: 91.46
GC content: 58.67
Gene sequence:
>1338_bases GTGAATACTGTAACGCTGGTCGGTACCGCAGTCGGCTCGGTTCTCTTACTGCTGTTTCTGGTGATGAAGGCGCGTATGCA CGCCTTTGTCGCATTAATGCTGGTGTCTATCGCTGCCGGGATCTTCTCCGGCATGCCGCTGGATCGCATTGCCGATACCA TGCAAAAAGGCATGGGCGACACCTTGGGCTTCCTGGCCATCGTGGTGGCGCTGGGGGCGATGTTTGGCAAAATATTGCAT GAAGTCGGCGCGCTGGACCAAATTGCGGCACATTTGCTGAAACGTTTCGGCCAAAGCAAGGCCCATTACGCACTCGGCAT TGCCGGTTTGATCTGTGCCTTGCCGCTGTTCTTTGACGTGGCCGTGGTGCTGCTGATCGGCATCGTGTTTGCCGTGGCGC GCCGCACCGACGGCAACATCGTTAAGCTGGCCATTCCGCTGTTTGCCGGTGTCGCCGCCGCCGCGTCGTTCTTGCTGCCG GGGCCGGTACCGATGCTGCTGGCTTCACAAATGAAGGCCGACTTCGGCTGGATGATTGCCATCGGTCTGGTCGCCGCGGT CCTCGGCATGCTGATTGCCGGCCCGTTGTACGGCAGCTTTATCAGCCGCTACGTTAACTGGTCAATGCCGGCGGATGAAA ACGAACCGACGCTGAACACCGCCAAACTGCCGTCATTTGGCCTTAGTCTGGCGCTGGTACTCTGCCCACTGGTGCTGGTC GGCATGAAAACCATTGGCGCCCGCCTGGTCACGCCTGGCTCGCAGTTACAACAATGGCTGGAGTTTATCGGCCACCCGTT TATCGCCATTTTAGTCGCCTGTTTGATCGTGATTTATGGACTGGCGAAACCACGCGGCATGACCAACGAACAAACGCTGG CCATTTGCTCTGCGGCAGTCCAGCCCGCCGGGATCATTTTGCTGATGACCGGGGCCGGTGGCGTCTTCAAACAGATTTTG GTGGATTCCGGCGTCGGCCCAGCCCTGGGGGACGCCATGATCGGTACCGGTCTGCCGATCGCCGTCGCGGCCTTTGTGCT GTCCGCCATGGTACGAGTGATTCAGGGATCTGCCACCGTGGCCTGTCTGACCACCGTCGGCCTGGTGTTACCGGTGACCA GCCAACTGGGGCTTGGCGGCGGACAACTGGCCGCGCTGGCTATCTGTATTGCCGGTGGATCTATCGTACTCAGTCACGTC AACGACGCCGGTTTCTGGCTGTTCGGCAAATTTACCGGTGCCAATGAGCTGCAAACGCTGAAAACCTGGACTGTGATGGA AACCATTCTGGGTAGCGTGGGCGGGATTATCGGCATGATTGCTTTCACCCTGTTTTAA
Upstream 100 bases:
>100_bases AGAGCGACGTGATGTCGGTGGACATCAACCAGCCGCTGGAAGCGGTGATCGCAGATACGGTGAAACATATCCAAAGTTTC CTGCCACAGGATGTGTGCGC
Downstream 100 bases:
>100_bases AACACCATAACGACATAACAGCGCCCCCGGCCTTGCACATCAGGGCTGCAATTCACCACCGGGGGCACCGCCACAGGCGG CGTCTATAACAATAGCATGT
Product: gluconate transporter
Products: Proton [Cytoplasm]; gluconate [Cytoplasm] [C]
Alternate protein names: Gluconate permease; Gnt-I system [H]
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MNTVTLVGTAVGSVLLLLFLVMKARMHAFVALMLVSIAAGIFSGMPLDRIADTMQKGMGDTLGFLAIVVALGAMFGKILH EVGALDQIAAHLLKRFGQSKAHYALGIAGLICALPLFFDVAVVLLIGIVFAVARRTDGNIVKLAIPLFAGVAAAASFLLP GPVPMLLASQMKADFGWMIAIGLVAAVLGMLIAGPLYGSFISRYVNWSMPADENEPTLNTAKLPSFGLSLALVLCPLVLV GMKTIGARLVTPGSQLQQWLEFIGHPFIAILVACLIVIYGLAKPRGMTNEQTLAICSAAVQPAGIILLMTGAGGVFKQIL VDSGVGPALGDAMIGTGLPIAVAAFVLSAMVRVIQGSATVACLTTVGLVLPVTSQLGLGGGQLAALAICIAGGSIVLSHV NDAGFWLFGKFTGANELQTLKTWTVMETILGSVGGIIGMIAFTLF
Sequences:
>Translated_445_residues MNTVTLVGTAVGSVLLLLFLVMKARMHAFVALMLVSIAAGIFSGMPLDRIADTMQKGMGDTLGFLAIVVALGAMFGKILH EVGALDQIAAHLLKRFGQSKAHYALGIAGLICALPLFFDVAVVLLIGIVFAVARRTDGNIVKLAIPLFAGVAAAASFLLP GPVPMLLASQMKADFGWMIAIGLVAAVLGMLIAGPLYGSFISRYVNWSMPADENEPTLNTAKLPSFGLSLALVLCPLVLV GMKTIGARLVTPGSQLQQWLEFIGHPFIAILVACLIVIYGLAKPRGMTNEQTLAICSAAVQPAGIILLMTGAGGVFKQIL VDSGVGPALGDAMIGTGLPIAVAAFVLSAMVRVIQGSATVACLTTVGLVLPVTSQLGLGGGQLAALAICIAGGSIVLSHV NDAGFWLFGKFTGANELQTLKTWTVMETILGSVGGIIGMIAFTLF >Mature_445_residues MNTVTLVGTAVGSVLLLLFLVMKARMHAFVALMLVSIAAGIFSGMPLDRIADTMQKGMGDTLGFLAIVVALGAMFGKILH EVGALDQIAAHLLKRFGQSKAHYALGIAGLICALPLFFDVAVVLLIGIVFAVARRTDGNIVKLAIPLFAGVAAAASFLLP GPVPMLLASQMKADFGWMIAIGLVAAVLGMLIAGPLYGSFISRYVNWSMPADENEPTLNTAKLPSFGLSLALVLCPLVLV GMKTIGARLVTPGSQLQQWLEFIGHPFIAILVACLIVIYGLAKPRGMTNEQTLAICSAAVQPAGIILLMTGAGGVFKQIL VDSGVGPALGDAMIGTGLPIAVAAFVLSAMVRVIQGSATVACLTTVGLVLPVTSQLGLGGGQLAALAICIAGGSIVLSHV NDAGFWLFGKFTGANELQTLKTWTVMETILGSVGGIIGMIAFTLF
Specific function: Part of the gluconate utilization system Gnt-I; low- affinity intake of gluconate [H]
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gntP permease family [H]
Homologues:
Organism=Escherichia coli, GI48994939, Length=444, Percent_Identity=72.7477477477478, Blast_Score=600, Evalue=1e-173, Organism=Escherichia coli, GI1790716, Length=428, Percent_Identity=32.9439252336449, Blast_Score=246, Evalue=3e-66, Organism=Escherichia coli, GI48994935, Length=434, Percent_Identity=33.6405529953917, Blast_Score=241, Evalue=7e-65, Organism=Escherichia coli, GI1789097, Length=456, Percent_Identity=34.2105263157895, Blast_Score=217, Evalue=1e-57, Organism=Escherichia coli, GI2367370, Length=421, Percent_Identity=32.0665083135392, Blast_Score=209, Evalue=4e-55, Organism=Escherichia coli, GI1790776, Length=437, Percent_Identity=31.350114416476, Blast_Score=197, Evalue=8e-52, Organism=Escherichia coli, GI1788707, Length=440, Percent_Identity=31.3636363636364, Blast_Score=180, Evalue=2e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003474 [H]
Pfam domain/function: PF02447 GntP_permease [H]
EC number: NA
Molecular weight: Translated: 45940; Mature: 45940
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTVTLVGTAVGSVLLLLFLVMKARMHAFVALMLVSIAAGIFSGMPLDRIADTMQKGMGD CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCH TLGFLAIVVALGAMFGKILHEVGALDQIAAHLLKRFGQSKAHYALGIAGLICALPLFFDV HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AVVLLIGIVFAVARRTDGNIVKLAIPLFAGVAAAASFLLPGPVPMLLASQMKADFGWMIA HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHH IGLVAAVLGMLIAGPLYGSFISRYVNWSMPADENEPTLNTAKLPSFGLSLALVLCPLVLV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH GMKTIGARLVTPGSQLQQWLEFIGHPFIAILVACLIVIYGLAKPRGMTNEQTLAICSAAV HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC QPAGIILLMTGAGGVFKQILVDSGVGPALGDAMIGTGLPIAVAAFVLSAMVRVIQGSATV CCCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHH ACLTTVGLVLPVTSQLGLGGGQLAALAICIAGGSIVLSHVNDAGFWLFGKFTGANELQTL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHEEEECCCCCEEEEEEECCCCHHHHH KTWTVMETILGSVGGIIGMIAFTLF HHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNTVTLVGTAVGSVLLLLFLVMKARMHAFVALMLVSIAAGIFSGMPLDRIADTMQKGMGD CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCH TLGFLAIVVALGAMFGKILHEVGALDQIAAHLLKRFGQSKAHYALGIAGLICALPLFFDV HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH AVVLLIGIVFAVARRTDGNIVKLAIPLFAGVAAAASFLLPGPVPMLLASQMKADFGWMIA HHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHH IGLVAAVLGMLIAGPLYGSFISRYVNWSMPADENEPTLNTAKLPSFGLSLALVLCPLVLV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH GMKTIGARLVTPGSQLQQWLEFIGHPFIAILVACLIVIYGLAKPRGMTNEQTLAICSAAV HHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC QPAGIILLMTGAGGVFKQILVDSGVGPALGDAMIGTGLPIAVAAFVLSAMVRVIQGSATV CCCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHH ACLTTVGLVLPVTSQLGLGGGQLAALAICIAGGSIVLSHVNDAGFWLFGKFTGANELQTL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHEEEECCCCCEEEEEEECCCCHHHHH KTWTVMETILGSVGGIIGMIAFTLF HHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; gluconate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + gluconate [Periplasm] = Proton [Cytoplasm] + gluconate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]