| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is dhaM [H]
Identifier: 157372503
GI number: 157372503
Start: 4735023
End: 4736456
Strand: Reverse
Name: dhaM [H]
Synonym: Spro_4270
Alternate gene names: 157372503
Gene position: 4736456-4735023 (Counterclockwise)
Preceding gene: 157372504
Following gene: 157372500
Centisome position: 86.93
GC content: 62.48
Gene sequence:
>1434_bases ATGATCAATATCGTTGTAGTTTCACACAGCGCGCTGTTGGCGCGCGGGGTTGAAGAGCTGGCGTTGCAGATGATGCGTGG CGATGGCTGCAAACTGGTGCTGGCGGCGGGGGTCGATGATGCGGAGCACCCGATAGGCACCGACGCTGTCAAAGTGATGG AGGCGATTGAGTCGGTGGCTGACGGTGCGGGCATTGTGGTGCTGATGGATTTGGGCAGTGCGCTGCTGAGCGCCGAAACC GCCATCGATCTGCTGGATCCGTCGTTGGCCGCCAAAGTCCGGCTGTGCTCGGCACCGCTGGTCGAAGGGACGCTGGCCGC GGTGGTGGCTGCCAATGCCGGAGCCGGGCTGGAACAGGTACTGGCCGAGGCGCAGGGCGCATTGCAGGCCAAACAGGCGC AGTTGGGGGAAGCCACCGCGCCGGTTGCGCAAAGCGTTGAATTGCCGCTTGCTCAGGGGAAAAGTGTCAGTTGGACGGTA CAGAACCCGCATGGCCTGCACGCCCGACCGGCGGCGCGGCTGGCGGAAGCGTTGGCCCCCTTTGATGCCGAGCTGGTGCT GGAAAAACAGGGCCAGTGCGCCAATCCGCGTAGTCTTAACCAGATTGCGCTTTTGCAGGTGCGCCATGGCGACACCATTC GGCTGATTGCGGACGGACCACAGGCCGAACAGGCGCTGGCGGCGTTTAGCGCACTGGCGGAGCAGCACTTTGGCGAAACG GTCTCCGAGCAGAGCCTGCCGTCGCTGCACGGTATTCCGGTGGCGGAGAGCGTGACCAGTGGCCCGGTGTGGCAGGCGCT GAGCTTCTGGCCGACAGTGGTCGAGCGCACTATTGGCGCTGACGACGTGCTGAACGAACAACAGCGGCTACGCCAGGCGT TGCAGCTCACGCTGAGCGATTTGAACCGGTTGGCGGAGCGCACTGGCTCATTGATTGGCAAACCGCAGGCGGCCATATTC GGCGCCCACAGCATGCTGCTGGACGATCCAGATCTGCAGCAGGCGGCCTATACCCGCATCGCCCGCCAGCAATGCAGCGC CGAGCAGGCATGGCGGCAAGAGATGGAAGCGATTGCCGGGGAGTATCGTGAACTGGATGATGAATATATGCGGGCGCGGG AATTGGACGTGCGCGACATGCTGCGTCGCACCCTGAGTCATCTGCAACAGCAGCCGTTACCGGTGATTACGCTAACCGCG CCGTCCATTCTGGTGATGGATGAACTGATGCCGTCTGACGTGGTGATGCTTGATCGTCGTCTGGTGCTCGGCATCTGCTT AAGCGGCGGTAACGCACTGTCGCACAGCGCCATTTTGGCGAAGGCGATGGGCATGCCGATGGTGGTGGGCATGAACGATT GCATCAGCAAAACCCGCAACGGTCAGAAAGCGATGCTGGATGCGGCGCGCGGTGTGTTGCAACTCAGCCACTGA
Upstream 100 bases:
>100_bases TGGGTGAGCGCAGCATCGGCCATCAGGATCCGGGTGCCACCTCGGTGATGCTGATGATGAAAACGTTGGCAGCGGTCGCC GGCCAATAGCAGGAGGCGAG
Downstream 100 bases:
>100_bases CGGCATGCCCTCAGGCGCGCAGCTTAAACTGGCGAATATCAATCTGATGCTGTTTGATTTTTCGCCACAGCGTGGTGCGA CCAATGCCCAGCAGCTGCGC
Product: dihydroxyacetone kinase subunit M
Products: NA
Alternate protein names: Phosphocarrier protein HPr; Protein H; Phosphotransferase enzyme IIA component; PTS system EIIA component [H]
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MINIVVVSHSALLARGVEELALQMMRGDGCKLVLAAGVDDAEHPIGTDAVKVMEAIESVADGAGIVVLMDLGSALLSAET AIDLLDPSLAAKVRLCSAPLVEGTLAAVVAANAGAGLEQVLAEAQGALQAKQAQLGEATAPVAQSVELPLAQGKSVSWTV QNPHGLHARPAARLAEALAPFDAELVLEKQGQCANPRSLNQIALLQVRHGDTIRLIADGPQAEQALAAFSALAEQHFGET VSEQSLPSLHGIPVAESVTSGPVWQALSFWPTVVERTIGADDVLNEQQRLRQALQLTLSDLNRLAERTGSLIGKPQAAIF GAHSMLLDDPDLQQAAYTRIARQQCSAEQAWRQEMEAIAGEYRELDDEYMRARELDVRDMLRRTLSHLQQQPLPVITLTA PSILVMDELMPSDVVMLDRRLVLGICLSGGNALSHSAILAKAMGMPMVVGMNDCISKTRNGQKAMLDAARGVLQLSH
Sequences:
>Translated_477_residues MINIVVVSHSALLARGVEELALQMMRGDGCKLVLAAGVDDAEHPIGTDAVKVMEAIESVADGAGIVVLMDLGSALLSAET AIDLLDPSLAAKVRLCSAPLVEGTLAAVVAANAGAGLEQVLAEAQGALQAKQAQLGEATAPVAQSVELPLAQGKSVSWTV QNPHGLHARPAARLAEALAPFDAELVLEKQGQCANPRSLNQIALLQVRHGDTIRLIADGPQAEQALAAFSALAEQHFGET VSEQSLPSLHGIPVAESVTSGPVWQALSFWPTVVERTIGADDVLNEQQRLRQALQLTLSDLNRLAERTGSLIGKPQAAIF GAHSMLLDDPDLQQAAYTRIARQQCSAEQAWRQEMEAIAGEYRELDDEYMRARELDVRDMLRRTLSHLQQQPLPVITLTA PSILVMDELMPSDVVMLDRRLVLGICLSGGNALSHSAILAKAMGMPMVVGMNDCISKTRNGQKAMLDAARGVLQLSH >Mature_477_residues MINIVVVSHSALLARGVEELALQMMRGDGCKLVLAAGVDDAEHPIGTDAVKVMEAIESVADGAGIVVLMDLGSALLSAET AIDLLDPSLAAKVRLCSAPLVEGTLAAVVAANAGAGLEQVLAEAQGALQAKQAQLGEATAPVAQSVELPLAQGKSVSWTV QNPHGLHARPAARLAEALAPFDAELVLEKQGQCANPRSLNQIALLQVRHGDTIRLIADGPQAEQALAAFSALAEQHFGET VSEQSLPSLHGIPVAESVTSGPVWQALSFWPTVVERTIGADDVLNEQQRLRQALQLTLSDLNRLAERTGSLIGKPQAAIF GAHSMLLDDPDLQQAAYTRIARQQCSAEQAWRQEMEAIAGEYRELDDEYMRARELDVRDMLRRTLSHLQQQPLPVITLTA PSILVMDELMPSDVVMLDRRLVLGICLSGGNALSHSAILAKAMGMPMVVGMNDCISKTRNGQKAMLDAARGVLQLSH
Specific function: Phosphotransferase subunit of the dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone. DhaM serves as the phosphoryl donor. It is phosphorylated by HPr, then it donates its phosphoryl group to dhaL-ADP, which eventually tran
COG id: COG3412
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-4 domain [H]
Homologues:
Organism=Escherichia coli, GI226510935, Length=451, Percent_Identity=48.780487804878, Blast_Score=409, Evalue=1e-115, Organism=Escherichia coli, GI1788756, Length=196, Percent_Identity=32.6530612244898, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1788726, Length=344, Percent_Identity=26.453488372093, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI48994992, Length=321, Percent_Identity=26.4797507788162, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1789193, Length=232, Percent_Identity=28.448275862069, Blast_Score=76, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012844 - InterPro: IPR008279 - InterPro: IPR004701 - InterPro: IPR001020 - InterPro: IPR005698 - InterPro: IPR000032 - InterPro: IPR008731 [H]
Pfam domain/function: PF03610 EIIA-man; PF05524 PEP-utilisers_N; PF00391 PEP-utilizers; PF00381 PTS-HPr [H]
EC number: NA
Molecular weight: Translated: 50738; Mature: 50738
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00369 PTS_HPR_HIS ; PS51096 PTS_EIIA_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINIVVVSHSALLARGVEELALQMMRGDGCKLVLAAGVDDAEHPIGTDAVKVMEAIESVA CEEEEEECCHHHHHHCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHC DGAGIVVLMDLGSALLSAETAIDLLDPSLAAKVRLCSAPLVEGTLAAVVAANAGAGLEQV CCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHH LAEAQGALQAKQAQLGEATAPVAQSVELPLAQGKSVSWTVQNPHGLHARPAARLAEALAP HHHHHHHHHHHHHHHCCHHHHHHHHCCCHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCC FDAELVLEKQGQCANPRSLNQIALLQVRHGDTIRLIADGPQAEQALAAFSALAEQHFGET CCHHHHEECCCCCCCCCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHCCH VSEQSLPSLHGIPVAESVTSGPVWQALSFWPTVVERTIGADDVLNEQQRLRQALQLTLSD HHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LNRLAERTGSLIGKPQAAIFGAHSMLLDDPDLQQAAYTRIARQQCSAEQAWRQEMEAIAG HHHHHHHHHHHCCCCCHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EYRELDDEYMRARELDVRDMLRRTLSHLQQQPLPVITLTAPSILVMDELMPSDVVMLDRR HHHHCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCHHHHHHHH LVLGICLSGGNALSHSAILAKAMGMPMVVGMNDCISKTRNGQKAMLDAARGVLQLSH HHHHEEECCCCHHHHHHHHHHHCCCCEEECCHHHHHHCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MINIVVVSHSALLARGVEELALQMMRGDGCKLVLAAGVDDAEHPIGTDAVKVMEAIESVA CEEEEEECCHHHHHHCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHC DGAGIVVLMDLGSALLSAETAIDLLDPSLAAKVRLCSAPLVEGTLAAVVAANAGAGLEQV CCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHH LAEAQGALQAKQAQLGEATAPVAQSVELPLAQGKSVSWTVQNPHGLHARPAARLAEALAP HHHHHHHHHHHHHHHCCHHHHHHHHCCCHHCCCCEEEEEECCCCCCCCCHHHHHHHHHCC FDAELVLEKQGQCANPRSLNQIALLQVRHGDTIRLIADGPQAEQALAAFSALAEQHFGET CCHHHHEECCCCCCCCCCCCCEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHCCH VSEQSLPSLHGIPVAESVTSGPVWQALSFWPTVVERTIGADDVLNEQQRLRQALQLTLSD HHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LNRLAERTGSLIGKPQAAIFGAHSMLLDDPDLQQAAYTRIARQQCSAEQAWRQEMEAIAG HHHHHHHHHHHCCCCCHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EYRELDDEYMRARELDVRDMLRRTLSHLQQQPLPVITLTAPSILVMDELMPSDVVMLDRR HHHHCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHCCCHHHHHHHH LVLGICLSGGNALSHSAILAKAMGMPMVVGMNDCISKTRNGQKAMLDAARGVLQLSH HHHHEEECCCCHHHHHHHHHHHCCCCEEECCHHHHHHCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 2671658; 7984428 [H]