| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is fabZ [H]
Identifier: 157372014
GI number: 157372014
Start: 4178054
End: 4178584
Strand: Reverse
Name: fabZ [H]
Synonym: Spro_3779
Alternate gene names: 157372014
Gene position: 4178584-4178054 (Counterclockwise)
Preceding gene: 157372015
Following gene: 157372013
Centisome position: 76.69
GC content: 51.04
Gene sequence:
>531_bases ATGACTTCCTCCTTATTGGGGGCAGCGCAGGCCGTGTTGTTGATGCCATCAGTTTTTAGAGACAGGAAGAGTATTTTGAC TACTGACACTCATACTCTGGATATTGCAGAAATTTTAGAGTTGCTTCCTCACCGTTACCCGTTCTTGCTGGTTGATCGCG TCCTCGAGTTTGAGGAGCACAAATTCCTGCGTGCGGTGAAGAACGTATCTGTAAATGAGCCGTTTTTCCAGGGACACTTC CCTGGTAAGCCGATTTTTCCAGGCGTATTGATTCTGGAAGCCATGGCGCAGGCCACCGGTATTCTGGCGTTTAAAAGCGT CGGCAAACTGGAGCCGGGCGAGTTGTATTACTTTGCCGGTATCGACGAAGCTCGCTTCAAACGCCCGGTAGTGCCTGGTG ATCAAATGATCATGGAAGTCACCTTTGAGAAAACTCGTCGTGGTTTGACGCGCTTTAAAGGCGTGGCGACCGTCGACGGC AAAATTGTCTGCGAAGCAACCATGATGTGTGCGCGCAGCCGGGAGGCCTAA
Upstream 100 bases:
>100_bases TCGGAAAAGACTAATCACTACCGCCCGCCTCGCTGGGTACAAAACGAAACGCGTTGGTCATGAGACCAAAAGCGCAAAGA GTTGTTAATTTGCGGCCTGC
Downstream 100 bases:
>100_bases TCCGTGATCGACAAAACCGCCTTTATCCATCCTAGCGCGATTATTGAAGAAGGCGCCGTTATCGGCGCTGGTGCGCACAT CGGTCCCTTCTGCTACGTCG
Product: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MTSSLLGAAQAVLLMPSVFRDRKSILTTDTHTLDIAEILELLPHRYPFLLVDRVLEFEEHKFLRAVKNVSVNEPFFQGHF PGKPIFPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVATVDG KIVCEATMMCARSREA
Sequences:
>Translated_176_residues MTSSLLGAAQAVLLMPSVFRDRKSILTTDTHTLDIAEILELLPHRYPFLLVDRVLEFEEHKFLRAVKNVSVNEPFFQGHF PGKPIFPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVATVDG KIVCEATMMCARSREA >Mature_175_residues TSSLLGAAQAVLLMPSVFRDRKSILTTDTHTLDIAEILELLPHRYPFLLVDRVLEFEEHKFLRAVKNVSVNEPFFQGHFP GKPIFPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVATVDGK IVCEATMMCARSREA
Specific function: Involved in saturated fatty acids biosynthesis [H]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786377, Length=151, Percent_Identity=93.3774834437086, Blast_Score=293, Evalue=5e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013114 - InterPro: IPR010084 [H]
Pfam domain/function: PF07977 FabA [H]
EC number: 4.2.1.-
Molecular weight: Translated: 19703; Mature: 19572
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSLLGAAQAVLLMPSVFRDRKSILTTDTHTLDIAEILELLPHRYPFLLVDRVLEFEEH CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH KFLRAVKNVSVNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSVGKLEPGELYYFAG HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC IDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVATVDGKIVCEATMMCARSREA CCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCCC >Mature Secondary Structure TSSLLGAAQAVLLMPSVFRDRKSILTTDTHTLDIAEILELLPHRYPFLLVDRVLEFEEH CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH KFLRAVKNVSVNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSVGKLEPGELYYFAG HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEC IDEARFKRPVVPGDQMIMEVTFEKTRRGLTRFKGVATVDGKIVCEATMMCARSREA CCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA