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The map label for this gene is rseB [H]

Identifier: 157371909

GI number: 157371909

Start: 4066924

End: 4067883

Strand: Reverse

Name: rseB [H]

Synonym: Spro_3674

Alternate gene names: 157371909

Gene position: 4067883-4066924 (Counterclockwise)

Preceding gene: 157371910

Following gene: 157371908

Centisome position: 74.66

GC content: 56.25

Gene sequence:

>960_bases
ATGAAGCAAATTTGGTTCTCCGTCTGTCTATTGACGGGCAGCCTGCTCTACTCAAACATCGCCCCGGCGCAGCCCTCTGC
GTCCGGGGCGTTGTTACAACAGATGAGCAGTGCCAGCCGTTCGCTCAATTATGAACTCGCCTATATCAGCATCAGCAAGC
AGGGGATCGAATCGCTGCGCTATCGTCATGCGGTGATTGACCAGCAACCGCTCGGCCAATTACTGCATATGGACGGCCCG
CGCCGTGAAGTGCTGCAGCGTGGCGGCGGAATTAGCTATTTCGAACCCGGCCTGGAGCCCTTTACGCTGTCCGGCGATCA
CATCGTCGATGCGTTGCCGGCCATTGTTTATGCTGATTTTGACCGTCTGGCGAAATATTACGATTTCATCTCCGTCGGCA
GCACCCGAATTTCCGATCGTCCATGCGAAGTGATCCGCGTGGTTGCTCGCGATGGTTCACGCTATAGCTACATTGTCTGG
ATGGATGAAGCCACCAAGCTGCCGTTGCGGGTGGATTTGATCGACCGTGATGGCGAAACGCTTGAGCAATACCGGGTGAT
TTCGTTTGTCGTCGGGTCGCAGGTACAAGGCGCGATGCAGGGGCTGATCAAGGCTAATCTGCCACCCTTGCTGTCGCTTC
CGGCGATAGATAAAATCAAGTTGAGCTGGAGCACGGGCTGGTTACCGGCTGGGGTCGATGAAGTCGCACGTAACCGTCGC
AAGTTGCCGAATGTGAACGAACCTGTTGAGTCGCGGCTCTACAGCGACGGCTTGTTCAGTTTCTCGGTCAACGTCAGCCC
GGCGGGCAGCGGTGCCGGCCAGCAATATTATCGCCAGGGGCGTCGTACTATCCAAACCGAAGTGCGTAACGGCAATGAGA
TCACTATCGTGGGCGAACTGCCGCCGGCAACGGCCAAGCGTATCGCTGACAGTATTTCCTTCAAGGTGTCACCACAATGA

Upstream 100 bases:

>100_bases
GTCGTTTGCATTCTGATCAGCTGCAGCTTGAGCAAAGCACCCCACAACAGGCTGCCGTTCAGGTTCCCGGAACTCAGTCT
TTAGGAATGCAACAGCAGTA

Downstream 100 bases:

>100_bases
TGAAAGAGTGGGCCACGGTCGTTTCGTGGCAACAGGGCGTGGCGCTGCTGCGCTGTGAGCCGAAAGCCGGGTGTGGCAGT
TGTACTGCCCGTTCTGGCTG

Product: periplasmic negative regulator of sigmaE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MKQIWFSVCLLTGSLLYSNIAPAQPSASGALLQQMSSASRSLNYELAYISISKQGIESLRYRHAVIDQQPLGQLLHMDGP
RREVLQRGGGISYFEPGLEPFTLSGDHIVDALPAIVYADFDRLAKYYDFISVGSTRISDRPCEVIRVVARDGSRYSYIVW
MDEATKLPLRVDLIDRDGETLEQYRVISFVVGSQVQGAMQGLIKANLPPLLSLPAIDKIKLSWSTGWLPAGVDEVARNRR
KLPNVNEPVESRLYSDGLFSFSVNVSPAGSGAGQQYYRQGRRTIQTEVRNGNEITIVGELPPATAKRIADSISFKVSPQ

Sequences:

>Translated_319_residues
MKQIWFSVCLLTGSLLYSNIAPAQPSASGALLQQMSSASRSLNYELAYISISKQGIESLRYRHAVIDQQPLGQLLHMDGP
RREVLQRGGGISYFEPGLEPFTLSGDHIVDALPAIVYADFDRLAKYYDFISVGSTRISDRPCEVIRVVARDGSRYSYIVW
MDEATKLPLRVDLIDRDGETLEQYRVISFVVGSQVQGAMQGLIKANLPPLLSLPAIDKIKLSWSTGWLPAGVDEVARNRR
KLPNVNEPVESRLYSDGLFSFSVNVSPAGSGAGQQYYRQGRRTIQTEVRNGNEITIVGELPPATAKRIADSISFKVSPQ
>Mature_319_residues
MKQIWFSVCLLTGSLLYSNIAPAQPSASGALLQQMSSASRSLNYELAYISISKQGIESLRYRHAVIDQQPLGQLLHMDGP
RREVLQRGGGISYFEPGLEPFTLSGDHIVDALPAIVYADFDRLAKYYDFISVGSTRISDRPCEVIRVVARDGSRYSYIVW
MDEATKLPLRVDLIDRDGETLEQYRVISFVVGSQVQGAMQGLIKANLPPLLSLPAIDKIKLSWSTGWLPAGVDEVARNRR
KLPNVNEPVESRLYSDGLFSFSVNVSPAGSGAGQQYYRQGRRTIQTEVRNGNEITIVGELPPATAKRIADSISFKVSPQ

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3026

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseB family [H]

Homologues:

Organism=Escherichia coli, GI1788924, Length=315, Percent_Identity=68.2539682539683, Blast_Score=447, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005588 [H]

Pfam domain/function: PF03888 MucB_RseB [H]

EC number: NA

Molecular weight: Translated: 35297; Mature: 35297

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIWFSVCLLTGSLLYSNIAPAQPSASGALLQQMSSASRSLNYELAYISISKQGIESLR
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHH
YRHAVIDQQPLGQLLHMDGPRREVLQRGGGISYFEPGLEPFTLSGDHIVDALPAIVYADF
HHHHHCCHHHHHHHHCCCCCHHHHHHCCCCCCEECCCCCCEEECCCHHHHHHHHHHHHHH
DRLAKYYDFISVGSTRISDRPCEVIRVVARDGSRYSYIVWMDEATKLPLRVDLIDRDGET
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCHH
LEQYRVISFVVGSQVQGAMQGLIKANLPPLLSLPAIDKIKLSWSTGWLPAGVDEVARNRR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHH
KLPNVNEPVESRLYSDGLFSFSVNVSPAGSGAGQQYYRQGRRTIQTEVRNGNEITIVGEL
CCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECC
PPATAKRIADSISFKVSPQ
CCHHHHHHHHHCCEEECCC
>Mature Secondary Structure
MKQIWFSVCLLTGSLLYSNIAPAQPSASGALLQQMSSASRSLNYELAYISISKQGIESLR
CCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHH
YRHAVIDQQPLGQLLHMDGPRREVLQRGGGISYFEPGLEPFTLSGDHIVDALPAIVYADF
HHHHHCCHHHHHHHHCCCCCHHHHHHCCCCCCEECCCCCCEEECCCHHHHHHHHHHHHHH
DRLAKYYDFISVGSTRISDRPCEVIRVVARDGSRYSYIVWMDEATKLPLRVDLIDRDGET
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCHH
LEQYRVISFVVGSQVQGAMQGLIKANLPPLLSLPAIDKIKLSWSTGWLPAGVDEVARNRR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHH
KLPNVNEPVESRLYSDGLFSFSVNVSPAGSGAGQQYYRQGRRTIQTEVRNGNEITIVGEL
CCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECC
PPATAKRIADSISFKVSPQ
CCHHHHHHHHHCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]