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The map label for this gene is rseA [H]

Identifier: 157371910

GI number: 157371910

Start: 4067883

End: 4068536

Strand: Reverse

Name: rseA [H]

Synonym: Spro_3675

Alternate gene names: 157371910

Gene position: 4068536-4067883 (Counterclockwise)

Preceding gene: 157371911

Following gene: 157371909

Centisome position: 74.67

GC content: 54.13

Gene sequence:

>654_bases
ATGCAGAAAGAAAAGCTTTCCGCTCTGATGGATGGGGAATCGCTCGATAGCGAGCTGCTGAGTTCGTTGTCTAAAGACAG
GGCGCTTCAACAAAGCTGGCAGAGCTATCACCTGATACGTGACACACTACGGGGTGATATCGGACAAGTTATGCATCTCG
ATATCGCAGATCGTGTTGCTGCTGCACTTGAGAAAGAACCTGCACGTCTGGTTCCTTCTGCAGTTCCAGAATCTCAGCCG
CAACCTCACACCTGGCAGAAAATGCCGTTCTGGCACAAAGTCCGCCCTTGGGCCAGCCAGATCACACAGATTGGTATGGC
GGCCTGCGTGTCGCTGGCGGTGATTGTAGGCGTACAGCAATACAATCAACCGGCTGCACAATCTGGCGCCGCTGAATCAC
CGGCGTTTAATACCCTGCCAATCATGGGGCAGGCGTCACCGGTCAGCCTCGGCGTGCCGGCAGACAGTTTCTCCACCGGC
AGCGGTCAACAGCAGCAGGTGCAGGAACAGCGCAAACGCATTAACGCTATGCTGCAAGATTATGAGTTGCAACGTCGTTT
GCATTCTGATCAGCTGCAGCTTGAGCAAAGCACCCCACAACAGGCTGCCGTTCAGGTTCCCGGAACTCAGTCTTTAGGAA
TGCAACAGCAGTAA

Upstream 100 bases:

>100_bases
CGTACGCTCGCGTATTTTCCGCGCCAGGGAGGCTATCGATAATAAAGTTCAACCGCTGATTCAACGTTAGCAATGGCGGA
CACAGGAAGGGTACTTAGGC

Downstream 100 bases:

>100_bases
TGAAGCAAATTTGGTTCTCCGTCTGTCTATTGACGGGCAGCCTGCTCTACTCAAACATCGCCCCGGCGCAGCCCTCTGCG
TCCGGGGCGTTGTTACAACA

Product: anti-RNA polymerase sigma factor SigE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MQKEKLSALMDGESLDSELLSSLSKDRALQQSWQSYHLIRDTLRGDIGQVMHLDIADRVAAALEKEPARLVPSAVPESQP
QPHTWQKMPFWHKVRPWASQITQIGMAACVSLAVIVGVQQYNQPAAQSGAAESPAFNTLPIMGQASPVSLGVPADSFSTG
SGQQQQVQEQRKRINAMLQDYELQRRLHSDQLQLEQSTPQQAAVQVPGTQSLGMQQQ

Sequences:

>Translated_217_residues
MQKEKLSALMDGESLDSELLSSLSKDRALQQSWQSYHLIRDTLRGDIGQVMHLDIADRVAAALEKEPARLVPSAVPESQP
QPHTWQKMPFWHKVRPWASQITQIGMAACVSLAVIVGVQQYNQPAAQSGAAESPAFNTLPIMGQASPVSLGVPADSFSTG
SGQQQQVQEQRKRINAMLQDYELQRRLHSDQLQLEQSTPQQAAVQVPGTQSLGMQQQ
>Mature_217_residues
MQKEKLSALMDGESLDSELLSSLSKDRALQQSWQSYHLIRDTLRGDIGQVMHLDIADRVAAALEKEPARLVPSAVPESQP
QPHTWQKMPFWHKVRPWASQITQIGMAACVSLAVIVGVQQYNQPAAQSGAAESPAFNTLPIMGQASPVSLGVPADSFSTG
SGQQQQVQEQRKRINAMLQDYELQRRLHSDQLQLEQSTPQQAAVQVPGTQSLGMQQQ

Specific function: Negative regulator of rpoE [H]

COG id: COG3073

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseA family [H]

Homologues:

Organism=Escherichia coli, GI1788925, Length=217, Percent_Identity=67.2811059907834, Blast_Score=270, Evalue=7e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005573
- InterPro:   IPR005572 [H]

Pfam domain/function: PF03873 RseA_C; PF03872 RseA_N [H]

EC number: NA

Molecular weight: Translated: 23905; Mature: 23905

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKEKLSALMDGESLDSELLSSLSKDRALQQSWQSYHLIRDTLRGDIGQVMHLDIADRVA
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALEKEPARLVPSAVPESQPQPHTWQKMPFWHKVRPWASQITQIGMAACVSLAVIVGVQQ
HHHHCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNQPAAQSGAAESPAFNTLPIMGQASPVSLGVPADSFSTGSGQQQQVQEQRKRINAMLQD
HCCCHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
YELQRRLHSDQLQLEQSTPQQAAVQVPGTQSLGMQQQ
HHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCCC
>Mature Secondary Structure
MQKEKLSALMDGESLDSELLSSLSKDRALQQSWQSYHLIRDTLRGDIGQVMHLDIADRVA
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALEKEPARLVPSAVPESQPQPHTWQKMPFWHKVRPWASQITQIGMAACVSLAVIVGVQQ
HHHHCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YNQPAAQSGAAESPAFNTLPIMGQASPVSLGVPADSFSTGSGQQQQVQEQRKRINAMLQD
HCCCHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
YELQRRLHSDQLQLEQSTPQQAAVQVPGTQSLGMQQQ
HHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]