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The map label for this gene is rseC [H]

Identifier: 157371908

GI number: 157371908

Start: 4066451

End: 4066924

Strand: Reverse

Name: rseC [H]

Synonym: Spro_3673

Alternate gene names: 157371908

Gene position: 4066924-4066451 (Counterclockwise)

Preceding gene: 157371909

Following gene: 157371906

Centisome position: 74.64

GC content: 60.55

Gene sequence:

>474_bases
ATGAAAGAGTGGGCCACGGTCGTTTCGTGGCAACAGGGCGTGGCGCTGCTGCGCTGTGAGCCGAAAGCCGGGTGTGGCAG
TTGTACTGCCCGTTCTGGCTGTGGCGCGCGGGCGTTGAATGAACTGGTGCCGGAAACCGAACACCAGTTGCAGGTTCATA
TCGAGCAGCCGCTTGAGCCGGGCCAGCGGGTTGAGGTGGGTATTGCGGAAGGCAGCCTGTTGCGCTCAGCAATGCTGGTT
TATCTGACGCCGCTACTGGGCATGATGCTGGGGGGCAGCCTGTTGCAATACTGGTTGGGTACCGATGCTTCTGCCGCGCT
TGGTGCACTGCTCGGCGGTGTCGCGGCCTTTATGCTGGCGCGCAGTCTGGCACACCGCCTCGGTGAACAGGCAAATTACC
AACCCATCGTTCTGCAAATTGGTTTACCGCCTGGGGCCATGCGCCTGCAAACGGAAAACCAGCCTCTGCATTAA

Upstream 100 bases:

>100_bases
AAGTGCGTAACGGCAATGAGATCACTATCGTGGGCGAACTGCCGCCGGCAACGGCCAAGCGTATCGCTGACAGTATTTCC
TTCAAGGTGTCACCACAATG

Downstream 100 bases:

>100_bases
AACTGCTGCCGCGTCATCGCCGGGTTATGGTAGGCGGTGATGCGGGCGTAGATCATATGCTCCAGCAGCGCGATAAACAA
ATCGGCGCTGAGCAGTGAAA

Product: SoxR reducing system protein RseC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MKEWATVVSWQQGVALLRCEPKAGCGSCTARSGCGARALNELVPETEHQLQVHIEQPLEPGQRVEVGIAEGSLLRSAMLV
YLTPLLGMMLGGSLLQYWLGTDASAALGALLGGVAAFMLARSLAHRLGEQANYQPIVLQIGLPPGAMRLQTENQPLH

Sequences:

>Translated_157_residues
MKEWATVVSWQQGVALLRCEPKAGCGSCTARSGCGARALNELVPETEHQLQVHIEQPLEPGQRVEVGIAEGSLLRSAMLV
YLTPLLGMMLGGSLLQYWLGTDASAALGALLGGVAAFMLARSLAHRLGEQANYQPIVLQIGLPPGAMRLQTENQPLH
>Mature_157_residues
MKEWATVVSWQQGVALLRCEPKAGCGSCTARSGCGARALNELVPETEHQLQVHIEQPLEPGQRVEVGIAEGSLLRSAMLV
YLTPLLGMMLGGSLLQYWLGTDASAALGALLGGVAAFMLARSLAHRLGEQANYQPIVLQIGLPPGAMRLQTENQPLH

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3086

COG function: function code T; Positive regulator of sigma E activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseC family [H]

Homologues:

Organism=Escherichia coli, GI1788923, Length=154, Percent_Identity=51.2987012987013, Blast_Score=179, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007359 [H]

Pfam domain/function: PF04246 RseC_MucC [H]

EC number: NA

Molecular weight: Translated: 16753; Mature: 16753

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEWATVVSWQQGVALLRCEPKAGCGSCTARSGCGARALNELVPETEHQLQVHIEQPLEP
CCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCHHEEEEECCCCCC
GQRVEVGIAEGSLLRSAMLVYLTPLLGMMLGGSLLQYWLGTDASAALGALLGGVAAFMLA
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RSLAHRLGEQANYQPIVLQIGLPPGAMRLQTENQPLH
HHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCCCC
>Mature Secondary Structure
MKEWATVVSWQQGVALLRCEPKAGCGSCTARSGCGARALNELVPETEHQLQVHIEQPLEP
CCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCHHEEEEECCCCCC
GQRVEVGIAEGSLLRSAMLVYLTPLLGMMLGGSLLQYWLGTDASAALGALLGGVAAFMLA
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
RSLAHRLGEQANYQPIVLQIGLPPGAMRLQTENQPLH
HHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7889935; 9278503 [H]