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The map label for this gene is napD [H]

Identifier: 157371724

GI number: 157371724

Start: 3861192

End: 3861458

Strand: Reverse

Name: napD [H]

Synonym: Spro_3487

Alternate gene names: 157371724

Gene position: 3861458-3861192 (Counterclockwise)

Preceding gene: 157371725

Following gene: 157371723

Centisome position: 70.87

GC content: 56.18

Gene sequence:

>267_bases
ATGATGAATAACGAATGGCACGTCAGCGGGCTGGTGGTGCAGGCACGGCCGGAAAAAATTCCAAGGCTGGTCGCTGACTT
GCTGGCGATCGCAGACACGGAAATTCCGGCCCAGGACCAGCAGCACGGCAAGCTGGTGGTGGTGATGCAGGCAGCTTGTT
CCCATCAGCTGCTGGAAAAAATTGAGTCGGTACGCAATTTGGATGGCGTGCTGGCGGTATCGCTGGTTTATCACCAGCAG
GACACTCAAGGTGAGGTAACGCCATGA

Upstream 100 bases:

>100_bases
ATGGCTCAACCGGTGCTGGAGATCGCGGCCTGCACTGGCTGTGGCGCCTGTGTCGCCGGTTGTCCGGCCGGTGCCGTTAC
CCTAACCCAGAGCGAAAATA

Downstream 100 bases:

>100_bases
AACTCAGTCGTCGAGACTTCATGAAAGCAAACGCCGCGGTCGCCGCTGCGGCAGCCGCCGGGCTGACTATTCCTACGGTG
GTGCAGGCGGCGGCAGGCAG

Product: assembly protein for periplasmic nitrate reductase

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MMNNEWHVSGLVVQARPEKIPRLVADLLAIADTEIPAQDQQHGKLVVVMQAACSHQLLEKIESVRNLDGVLAVSLVYHQQ
DTQGEVTP

Sequences:

>Translated_88_residues
MMNNEWHVSGLVVQARPEKIPRLVADLLAIADTEIPAQDQQHGKLVVVMQAACSHQLLEKIESVRNLDGVLAVSLVYHQQ
DTQGEVTP
>Mature_88_residues
MMNNEWHVSGLVVQARPEKIPRLVADLLAIADTEIPAQDQQHGKLVVVMQAACSHQLLEKIESVRNLDGVLAVSLVYHQQ
DTQGEVTP

Specific function: Plays a role in the correct assembly of subunits of the periplasmic napAB enzyme [H]

COG id: COG3062

COG function: function code P; Uncharacterized protein involved in formation of periplasmic nitrate reductase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788535, Length=87, Percent_Identity=50.5747126436782, Blast_Score=87, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005623 [H]

Pfam domain/function: PF03927 NapD [H]

EC number: NA

Molecular weight: Translated: 9722; Mature: 9722

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNNEWHVSGLVVQARPEKIPRLVADLLAIADTEIPAQDQQHGKLVVVMQAACSHQLLEK
CCCCCEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHH
IESVRNLDGVLAVSLVYHQQDTQGEVTP
HHHHHCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MMNNEWHVSGLVVQARPEKIPRLVADLLAIADTEIPAQDQQHGKLVVVMQAACSHQLLEK
CCCCCEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHH
IESVRNLDGVLAVSLVYHQQDTQGEVTP
HHHHHCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]