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The map label for this gene is napF [H]

Identifier: 157371725

GI number: 157371725

Start: 3861448

End: 3861945

Strand: Reverse

Name: napF [H]

Synonym: Spro_3488

Alternate gene names: 157371725

Gene position: 3861945-3861448 (Counterclockwise)

Preceding gene: 157371728

Following gene: 157371724

Centisome position: 70.88

GC content: 60.44

Gene sequence:

>498_bases
ATGACCGTATTGTCACGGCGTAACCTGCTCGGTGGACAATGGCGTCAGCCAGCCGCAGCGATCCGCCCCCCGTGGTCGCT
GCGAGAATCCCTTTTTATTACCGGTTGCACTCGCTGCCAGGCCTGCGTTCGCGCCTGCGAAACCGGGGTGCTGATTAGCG
GCAGCGGCGGTTTTCCCGAAATTGATTTTCAACGAGCAGAATGTACCTTCTGCGGACGCTGCGTGCAGGCCTGCGAAGAA
CCGCTATTTCGCCCGTTGGCAGAAACACCCTGGCAACAACATGCGGTATTCGGTAGCGGTTGTCTGGCGCAGCGGGGCGT
GGAATGCCGCAGTTGTCAGGATAGCTGTGAGACCCAGGCGATCCGCTTTCGGCCCCGTCTGGGCGAAATGGCTCAACCGG
TGCTGGAGATCGCGGCCTGCACTGGCTGTGGCGCCTGTGTCGCCGGTTGTCCGGCCGGTGCCGTTACCCTAACCCAGAGC
GAAAATAATGATGAATAA

Upstream 100 bases:

>100_bases
AGTAACTGGGGTGAGCGAGTGCAGGTAACAACGCTGCAGCTTGAAAGATGACGGGTATATTTACGCGCGATGGCGTGTTT
GCAATGTCGAGGATAACAGC

Downstream 100 bases:

>100_bases
CGAATGGCACGTCAGCGGGCTGGTGGTGCAGGCACGGCCGGAAAAAATTCCAAGGCTGGTCGCTGACTTGCTGGCGATCG
CAGACACGGAAATTCCGGCC

Product: ferredoxin-type protein NapF

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MTVLSRRNLLGGQWRQPAAAIRPPWSLRESLFITGCTRCQACVRACETGVLISGSGGFPEIDFQRAECTFCGRCVQACEE
PLFRPLAETPWQQHAVFGSGCLAQRGVECRSCQDSCETQAIRFRPRLGEMAQPVLEIAACTGCGACVAGCPAGAVTLTQS
ENNDE

Sequences:

>Translated_165_residues
MTVLSRRNLLGGQWRQPAAAIRPPWSLRESLFITGCTRCQACVRACETGVLISGSGGFPEIDFQRAECTFCGRCVQACEE
PLFRPLAETPWQQHAVFGSGCLAQRGVECRSCQDSCETQAIRFRPRLGEMAQPVLEIAACTGCGACVAGCPAGAVTLTQS
ENNDE
>Mature_164_residues
TVLSRRNLLGGQWRQPAAAIRPPWSLRESLFITGCTRCQACVRACETGVLISGSGGFPEIDFQRAECTFCGRCVQACEEP
LFRPLAETPWQQHAVFGSGCLAQRGVECRSCQDSCETQAIRFRPRLGEMAQPVLEIAACTGCGACVAGCPAGAVTLTQSE
NNDE

Specific function: Involved in electron transfer [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788536, Length=152, Percent_Identity=51.9736842105263, Blast_Score=168, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004496 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 17790; Mature: 17659

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
10.9 %Cys+Met (Translated Protein)
9.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
10.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLSRRNLLGGQWRQPAAAIRPPWSLRESLFITGCTRCQACVRACETGVLISGSGGFPE
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCEEEECCCCCCC
IDFQRAECTFCGRCVQACEEPLFRPLAETPWQQHAVFGSGCLAQRGVECRSCQDSCETQA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHCCCCHHHHHHHHHHHH
IRFRPRLGEMAQPVLEIAACTGCGACVAGCPAGAVTLTQSENNDE
HHHCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECCCCCCC
>Mature Secondary Structure 
TVLSRRNLLGGQWRQPAAAIRPPWSLRESLFITGCTRCQACVRACETGVLISGSGGFPE
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCEEEECCCCCCC
IDFQRAECTFCGRCVQACEEPLFRPLAETPWQQHAVFGSGCLAQRGVECRSCQDSCETQA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHCCCCHHHHHHHHHHHH
IRFRPRLGEMAQPVLEIAACTGCGACVAGCPAGAVTLTQSENNDE
HHHCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]